BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001528
         (1705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   649   0.0  
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   649   0.0  
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho...   634   e-179
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   630   e-178
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   615   e-173

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  649 bits (1674), Expect = 0.0
 Identities = 326/521 (62%), Positives = 391/521 (75%), Gaps = 4/521 (0%)
 Frame = -1

Query: 1555 EKAMVITRVSFGGFDKNVRAKDFTNFLEDEIGLIWRCRLKNSWTPPESYPNFXXXXXXXX 1376
            EK  V+T+VSFGGFDK+V A+D   +L++EIG +WRCRLK SWTPPESYPNF        
Sbjct: 7    EKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVI 66

Query: 1375 XXXXXXXXXEPHAFVHFASPEAAIRAKNAAGSCELIYYQSPLMVNLGPESSFQTTLRRQK 1196
                     EPHAFVHFASP++A  AKNAAG CEL +   P+ V+LGPE+ F    RR+ 
Sbjct: 67   QRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRT 126

Query: 1195 IDPFKFPDVCVEIGTLVSLNEFWVGWKGPASGVDFVVDPFDGSCKILFTKETAFSFKSKP 1016
              PFK  DV VEIGTLVS +EF VGW+GP SGVDF+VDPFDG CK  FT++TAFSFK   
Sbjct: 127  TIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTT 186

Query: 1015 KHVVLKCDFKLEFLVRDIVEIKQCNSTXXXXXXXXXXSAPHIFYRTADDDIYVSVPFDLL 836
            +H V++CDFKLEFLVRDI EIKQ   T          SAP ++YRTADDDI V VPFDLL
Sbjct: 187  EHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLL 246

Query: 835  DDEDPWIRTTDFT-SGVIGRSNSYMISMSPRYGAKLNKAMANIKERRIPYSSPRQ-LKVL 662
            DD+DPWIRTTDFT SG IGR NSY +S+ PR+GAKL +A+  ++ERR+     R+ L V 
Sbjct: 247  DDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVT 306

Query: 661  QEPAVPT-LPNTFFCIPCKDAISFEVIFMVNAVLHKGIVNQHQLSDKFFELLKTNSREVN 485
             EP     + + FFCI  ++ + F ++F+VNAV+HKGI NQHQLSD FF+LL+    +VN
Sbjct: 307  AEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVN 366

Query: 484  IAALRHMYCYRRPVFDACRRLRLVQEWLLKNPKVLKGSKISDYNIEVNRLVITPTRAYCL 305
            IAALRH+  Y+ PVFDA +RL+ VQ+WLLKNPK+ + SK  D  +E+ RL ITPTRAYCL
Sbjct: 367  IAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCL 426

Query: 304  PPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLNNHVLNYYVAPIVRDITSNSFPQKTT 125
            PPEVELSNRVLR+YK++AD+FLRVTFMDEG   +N + L YY APIVRDITSNSF QKT 
Sbjct: 427  PPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTR 486

Query: 124  VFKRVKT-MTDGFDLCGRKYSFLAFSSNQLRDRSAWFFAED 5
            +FKRVK+ +TDGF LCGRKYSFLAFSSNQLRDRSAWFFAED
Sbjct: 487  IFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAED 527


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  649 bits (1674), Expect = 0.0
 Identities = 333/525 (63%), Positives = 400/525 (76%), Gaps = 7/525 (1%)
 Frame = -1

Query: 1555 EKAMVITRVSFGGFDKNVRAKDFTNFLEDEIGLIWRCRLKNSWTPPESYPNFXXXXXXXX 1376
            EK MV+T++S GGFD+ V A + T +LED IG + RCRLK S TPPESYP+F        
Sbjct: 7    EKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDTAKI 66

Query: 1375 XXXXXXXXXEPHAFVHFASPEAAIRAKNAAGSCELIYYQSPLMVNLGPESSFQTTLRRQK 1196
                     EPHAFVHF SPEAA  A +AAG  EL  +  PL V+LGPE+ F    RR+ 
Sbjct: 67   ERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRT 126

Query: 1195 IDPFKFPDVCVEIGTLVSLNEFWVGWKGPASGVDFVVDPFDGSCKILFTKETAFSFKSKP 1016
              PFKFPDV +EIG LVS +E++ GW+GP+SGVDF+VDPFDG+CK LFTK+TAFSFK  P
Sbjct: 127  TFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMP 186

Query: 1015 KHVVLKCDFKLEFLVRDIVEIKQCNSTXXXXXXXXXXSAPHIFYRTADDDIYVSVPFDLL 836
            KH V+KC+FK+EFLVR+I E++Q              S+P ++YRTADDDI  +VPFDLL
Sbjct: 187  KHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLL 246

Query: 835  DDEDPWIRTTDFT-SGVIGRSNSYMISMSPRYGAKLNKAMANIKERRIPY--SSPR-QLK 668
            DD+DPWIRTTDFT SG IGR NSY IS+ PRYGAKL KAM  ++ RR+     SP+ QL+
Sbjct: 247  DDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLR 306

Query: 667  VLQEP--AVPTLPNTFFCIPCKDAISFEVIFMVNAVLHKGIVNQHQLSDKFFELLKTNSR 494
            V  EP   +P + + FFCI  K+ I F V+F+VNAV+HKGI+NQHQLSDKFF+LL++  +
Sbjct: 307  VRDEPDFGLP-MSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQK 365

Query: 493  EVNIAALRHMYCYRRPVFDACRRLRLVQEWLLKNPKVLKGSKISDYNIEVNRLVITPTRA 314
            ++NIAAL+H+  YR PVFDA +RL+LV +WLLKNPK+LK  K  D  +EV RLVITP++A
Sbjct: 366  DINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKA 425

Query: 313  YCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLNNHVLNYYVAPIVRDITSNSFPQ 134
            YCLPPEVELSNRVLR YKEV+DRFLRVTFMDEG   +N +VLNYYVAPIV+ ITSNSFPQ
Sbjct: 426  YCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQ 485

Query: 133  KTTVFKRVKT-MTDGFDLCGRKYSFLAFSSNQLRDRSAWFFAEDK 2
            KT VFKRVKT +TDGF LCGRKYSFLAFSSNQLRDRSAWFFAEDK
Sbjct: 486  KTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK 530


>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1198

 Score =  634 bits (1636), Expect = e-179
 Identities = 321/522 (61%), Positives = 391/522 (74%), Gaps = 5/522 (0%)
 Frame = -1

Query: 1552 KAMVITRVSFGGFDKNVRAKDFTNFLEDEIGLIWRCRLKNSWTPPESYPNFXXXXXXXXX 1373
            K  V+T+VS GGFD +V AKD   +LE EIGL+WRCRLK SWTPPESYPNF         
Sbjct: 8    KETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDITKIT 67

Query: 1372 XXXXXXXXEPHAFVHFASPEAAIRAKNAAGSCELIYYQSPLMVNLGPESSFQTTLRRQKI 1193
                    EPHAFVHFA P++A  A +AA  CEL      L  +LGPE+ F    RR+K 
Sbjct: 68   RTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKT 127

Query: 1192 DPFKFPDVCVEIGTLVSLNEFWVGWKGPASGVDFVVDPFDGSCKILFTKETAFSFKSKPK 1013
             PFK   V VEIGTLVS +EF+VGW+GP +GVDF+VDPFDG+C+  F++ TAFSFKS  +
Sbjct: 128  TPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAE 187

Query: 1012 HVVLKCDFKLEFLVRDIVEIKQCNSTXXXXXXXXXXSAPHIFYRTADDDIYVSVPFDLLD 833
            H V+KCDFK+EFLVRDI EIKQ   T          SAP ++YRTADDDI VSVPFDLLD
Sbjct: 188  HAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLD 247

Query: 832  DEDPWIRTTDFT-SGVIGRSNSYMISMSPRYGAKLNKAMANIKERRIPYSSPRQ-LKVLQ 659
            D+DPWIRTTDFT SG IGR +SY +S+ PR+G KL KA+  +KERR+     R+ +++  
Sbjct: 248  DDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRD 307

Query: 658  EP--AVPTLPNTFFCIPCKDAISFEVIFMVNAVLHKGIVNQHQLSDKFFELLKTNSREVN 485
            EP   +P + + FFCI  K+ I+F+V+F+VNAV+HKGI NQHQLS+ FF+LL+    EVN
Sbjct: 308  EPDFGMP-MTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVN 366

Query: 484  IAALRHMYCYRRPVFDACRRLRLVQEWLLKNPKVLKGSKISDYNIEVNRLVITPTRAYCL 305
            +AAL+H+Y YRRPVFDA ++L++ QEWLLKNPK  K  K  D   E+ RLVITPT+AYCL
Sbjct: 367  VAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCL 426

Query: 304  PPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLNNHVLNYYVAPIVRDITSNSFPQKTT 125
            PPEVELSNRVLRKYK+VADRFLRVTFMDEG   +N++ LNY+ APIVR ITS SFPQKT 
Sbjct: 427  PPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTR 486

Query: 124  VFKRVKT-MTDGFDLCGRKYSFLAFSSNQLRDRSAWFFAEDK 2
            +FKRV++ +T+GF LCGR+YSFLAFSSNQLRDRSAWFFAED+
Sbjct: 487  IFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDR 528


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  630 bits (1625), Expect = e-178
 Identities = 316/525 (60%), Positives = 392/525 (74%), Gaps = 8/525 (1%)
 Frame = -1

Query: 1552 KAMVITRVSFGGFDKNVRAKDFTNFLEDEIGLIWRCRLKNSWTPPESYPNFXXXXXXXXX 1373
            K  V+T+VS GGFD +V AKD   +L+  IGL+WRCRLK SWTPPESYPNF         
Sbjct: 8    KETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIE 67

Query: 1372 XXXXXXXXEPHAFVHFASPEAAIRAKNAAGSCELIYYQSPLMVNLGPESSFQTTLRRQKI 1193
                     PHAFVHFA P++A  A NA+G CEL      L V+LGP++ F    RR+  
Sbjct: 68   RTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTT 127

Query: 1192 DPFKFPDVCVEIGTLVSLNEFWVGWKGPASGVDFVVDPFDGSCKILFTKETAFSFKSKPK 1013
             PFK  DV  EIG LVS +EF+VGW+GP SGVDF+VDPFDG+CK  F++ TAFS KS  +
Sbjct: 128  TPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSE 187

Query: 1012 HVVLKCDFKLEFLVRDIVEIKQCNSTXXXXXXXXXXSAPHIFYRTADDDIYVSVPFDLLD 833
            H V+KCDFK+EFLVRDI EI Q   T          SAP ++YRTADDDI   VPFDLLD
Sbjct: 188  HAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLD 247

Query: 832  DEDPWIRTTDFT-SGVIGRSNSYMISMSPRYGAKLNKAMANIKERRIPY----SSPRQLK 668
            D+DPWIRTTDFT SG IGR +SY +S+ PR+G+KL KA+  +KERR+      +  R+++
Sbjct: 248  DDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIR 307

Query: 667  VLQEP--AVPTLPNTFFCIPCKDAISFEVIFMVNAVLHKGIVNQHQLSDKFFELLKTNSR 494
            +L EP   +P + + FFCI  K+ I+FEV+F+VNAV+HKGI NQHQLS+ FF+LL+    
Sbjct: 308  ILDEPDFGMP-MSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHT 366

Query: 493  EVNIAALRHMYCYRRPVFDACRRLRLVQEWLLKNPKVLKGSKISDYNIEVNRLVITPTRA 314
            EVN++AL+H+  YRRPVF+A RRL+ VQEWLLKNP + K  K     +E+ RLVITPT+A
Sbjct: 367  EVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKA 426

Query: 313  YCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLNNHVLNYYVAPIVRDITSNSFPQ 134
            YCLPPEVELSNRVLRKYK+VADRFLRVTFMDEG  ++N++VLNYYVAPIVRDITSNSFPQ
Sbjct: 427  YCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQ 486

Query: 133  KTTVFKRVKT-MTDGFDLCGRKYSFLAFSSNQLRDRSAWFFAEDK 2
            KT +FKRV++ +T+GF LCGR+YSFLAFS+NQLRD+SAWFF+E++
Sbjct: 487  KTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEER 531


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  615 bits (1586), Expect = e-173
 Identities = 309/527 (58%), Positives = 388/527 (73%), Gaps = 4/527 (0%)
 Frame = -1

Query: 1570 VGIEEEKAMVITRVSFGGFDKNVRAKDFTNFLEDEIGLIWRCRLKNSWTPPESYPNFXXX 1391
            +G EE + +V+T+VSFGGFD +V+A+D  ++LE EIGL+ RCRLK SWTPPESYP+F   
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 1390 XXXXXXXXXXXXXXEPHAFVHFASPEAAIRAKNAAGSCELIYYQSPLMVNLGPESSFQTT 1211
                           PHAFVHF SP++A  A +AAG  ELI+    L  +LGPES F   
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 1210 LRRQKIDPFKFPDVCVEIGTLVSLNEFWVGWKGPASGVDFVVDPFDGSCKILFTKETAFS 1031
             RR+   PFK  DV V+IG L   + F V W+GP+SG+DF+VDPFDG+CK  FTK+TAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 1030 FKSKPKHVVLKCDFKLEFLVRDIVEIKQCNSTXXXXXXXXXXSAPHIFYRTADDDIYVSV 851
            FK   KH  LKCD+K+EF+VRDI +I +   T          S+P I+YRTADDDI   V
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240

Query: 850  PFDLLDDEDPWIRTTDFT-SGVIGRSNSYMISMSPRYGAKLNKAMANIKERRI-PYSSPR 677
            P+DLLDD+DPWIRTTDFT SG IGR N++ +S+ PRYG KLN AM  +KE+R+   S  R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 676  QLKVLQEPAVPT-LPNTFFCIPCKDAISFEVIFMVNAVLHKGIVNQHQLSDKFFELLKTN 500
              K+L EP     + + FFCI  K  ISFE++F+VNAV+HKGI+NQHQ+SD+FF+LL+  
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 499  SREVNIAALRHMYCYRRPVFDACRRLRLVQEWLLKNPKVLKGSKISDYNIEVNRLVITPT 320
              EVN+AAL H++ +RRPV DAC++L+LVQEWLLKNP +LK SK     +E+ RLVITP+
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 319  RAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLNNHVLNYYVAPIVRDITSNSF 140
            +AYC PPEVELSNRVLR+YK+VADRFLRVTFMDEG  ++N+HV  YYVAPIV++ITS+SF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 139  PQKTTVFKRVK-TMTDGFDLCGRKYSFLAFSSNQLRDRSAWFFAEDK 2
            PQKT +F R+K  +  GF LCGRKYSFLA+SSNQLRD+SAWFFAE K
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK 527