BLASTX nr result

ID: Aconitum21_contig00000786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000786
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36035.3| unnamed protein product [Vitis vinifera]              546   e-153
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   546   e-153
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   518   e-144
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   512   e-142

>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  546 bits (1407), Expect = e-153
 Identities = 287/423 (67%), Positives = 327/423 (77%), Gaps = 4/423 (0%)
 Frame = +1

Query: 292  SMGMSVSKNKKGKTKTYWVCSGCGKEFGKWWGSCTSCGE--ELKEFLEPE--NVDCKTTG 459
            S G  V   KKGK+K  WVCS CG   G+WWG+C  C +   +K+F   E  N   + +G
Sbjct: 91   SDGGVVRGRKKGKSKVCWVCSDCGYSDGQWWGACRECNKVGTMKQFSAGESGNGGSRVSG 150

Query: 460  YSVTDKVVGSWFHQKAGELLPQRVTDVNKGINQLTWKIPLSGLFGAEXXXXXXXXXXXXX 639
            + V+D VV SW  Q+  E+ P R+TDVN+GINQ+ W+IPL G FG E             
Sbjct: 151  FEVSDNVVRSWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGS 210

Query: 640  XXXXXXXXXXXKSTLLLQIAAMIAEGDGSGRPAPVVYVSGEESVEQIANRADRMRIGTED 819
                       KSTLLLQIAA+IAEG   G  +PVVYVSGEESVEQI NRADRMRI TE+
Sbjct: 211  LVLVGGDPGAGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEE 270

Query: 820  LFLYSGTDIEDILEKIHALSPRALIVDSIQTVYLKGVAGSAGGMVQVKECTQSLLRFAKK 999
            LFLYS TDIEDIL ++H LSPRAL+VDSIQTVYLKGV GSAGG+ QVKECT +LLRFAKK
Sbjct: 271  LFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKK 330

Query: 1000 TNIPVLLIGHVTKAGDLAGPRVLEHIVDVVLYMEGEKYSAHRFLRSVKNRFGSTDELGVF 1179
            TNIPV LIGHVTK+GD+AGPRVLEHIVDVVLYMEGEK+S+HR LRSVKNRFGSTDELGVF
Sbjct: 331  TNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLLRSVKNRFGSTDELGVF 390

Query: 1180 EMSQDGLQAVPNPSDIFLSEQHSDSEILVGLAVAVIIDGSRSFLLEIQALCLPDTLVPRQ 1359
            EM+Q GLQ V NPS++FLSEQ+SDSEIL GLAVAVI+DGSRSFLLEIQALCL  + V RQ
Sbjct: 391  EMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQ 450

Query: 1360 FNGVQKKRSEMIISVLTKQAGLMLQNNAIFVNVVSGVNLQETAGDLAIAAAICSSFLEFP 1539
             NGV   R++MII+VL KQAGL LQ+N IF+NVVSGV L ETAGDLA+AAAICSSFLEFP
Sbjct: 451  VNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAGDLAVAAAICSSFLEFP 510

Query: 1540 IPN 1548
            IPN
Sbjct: 511  IPN 513


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  546 bits (1407), Expect = e-153
 Identities = 287/423 (67%), Positives = 327/423 (77%), Gaps = 4/423 (0%)
 Frame = +1

Query: 292  SMGMSVSKNKKGKTKTYWVCSGCGKEFGKWWGSCTSCGE--ELKEFLEPE--NVDCKTTG 459
            S G  V   KKGK+K  WVCS CG   G+WWG+C  C +   +K+F   E  N   + +G
Sbjct: 132  SDGGVVRGRKKGKSKVCWVCSDCGYSDGQWWGACRECNKVGTMKQFSAGESGNGGSRVSG 191

Query: 460  YSVTDKVVGSWFHQKAGELLPQRVTDVNKGINQLTWKIPLSGLFGAEXXXXXXXXXXXXX 639
            + V+D VV SW  Q+  E+ P R+TDVN+GINQ+ W+IPL G FG E             
Sbjct: 192  FEVSDNVVRSWLPQQPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGS 251

Query: 640  XXXXXXXXXXXKSTLLLQIAAMIAEGDGSGRPAPVVYVSGEESVEQIANRADRMRIGTED 819
                       KSTLLLQIAA+IAEG   G  +PVVYVSGEESVEQI NRADRMRI TE+
Sbjct: 252  LVLVGGDPGAGKSTLLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEE 311

Query: 820  LFLYSGTDIEDILEKIHALSPRALIVDSIQTVYLKGVAGSAGGMVQVKECTQSLLRFAKK 999
            LFLYS TDIEDIL ++H LSPRAL+VDSIQTVYLKGV GSAGG+ QVKECT +LLRFAKK
Sbjct: 312  LFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKK 371

Query: 1000 TNIPVLLIGHVTKAGDLAGPRVLEHIVDVVLYMEGEKYSAHRFLRSVKNRFGSTDELGVF 1179
            TNIPV LIGHVTK+GD+AGPRVLEHIVDVVLYMEGEK+S+HR LRSVKNRFGSTDELGVF
Sbjct: 372  TNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLLRSVKNRFGSTDELGVF 431

Query: 1180 EMSQDGLQAVPNPSDIFLSEQHSDSEILVGLAVAVIIDGSRSFLLEIQALCLPDTLVPRQ 1359
            EM+Q GLQ V NPS++FLSEQ+SDSEIL GLAVAVI+DGSRSFLLEIQALCL  + V RQ
Sbjct: 432  EMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQ 491

Query: 1360 FNGVQKKRSEMIISVLTKQAGLMLQNNAIFVNVVSGVNLQETAGDLAIAAAICSSFLEFP 1539
             NGV   R++MII+VL KQAGL LQ+N IF+NVVSGV L ETAGDLA+AAAICSSFLEFP
Sbjct: 492  VNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAGDLAVAAAICSSFLEFP 551

Query: 1540 IPN 1548
            IPN
Sbjct: 552  IPN 554


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  546 bits (1406), Expect = e-153
 Identities = 283/412 (68%), Positives = 321/412 (77%), Gaps = 3/412 (0%)
 Frame = +1

Query: 322  KGKTKTYWVCSGCGKEFGKWWGSCTSCGE--ELKEFLEPE-NVDCKTTGYSVTDKVVGSW 492
            KGK+KT WVC  CG   G+WWGSC SC E   +K+F E +     K +G   ++  V SW
Sbjct: 43   KGKSKTSWVCEICGFTSGQWWGSCRSCNEVGTMKQFFEAKIGSGNKVSGIEASENAVRSW 102

Query: 493  FHQKAGELLPQRVTDVNKGINQLTWKIPLSGLFGAEXXXXXXXXXXXXXXXXXXXXXXXX 672
              QK GEL P R+TDVN+G+N L W+IPLSGLFG+E                        
Sbjct: 103  LPQKPGELRPLRLTDVNRGMNMLNWRIPLSGLFGSEVERVLGGGLVPGSLVLVGGDPGVG 162

Query: 673  KSTLLLQIAAMIAEGDGSGRPAPVVYVSGEESVEQIANRADRMRIGTEDLFLYSGTDIED 852
            KSTLLLQ+AA+IA+ +  G  APVVYVSGEESVEQI NRADRM IGTE+L+LYS TDIED
Sbjct: 163  KSTLLLQVAAIIADSEDPGGSAPVVYVSGEESVEQIGNRADRMEIGTEELYLYSSTDIED 222

Query: 853  ILEKIHALSPRALIVDSIQTVYLKGVAGSAGGMVQVKECTQSLLRFAKKTNIPVLLIGHV 1032
            IL KI  LSPRALI+DSIQTVYLKGVAGSAGG+ QVKECT +LLRFAK TNIP+LLIGHV
Sbjct: 223  ILGKIQHLSPRALIIDSIQTVYLKGVAGSAGGLSQVKECTSALLRFAKTTNIPILLIGHV 282

Query: 1033 TKAGDLAGPRVLEHIVDVVLYMEGEKYSAHRFLRSVKNRFGSTDELGVFEMSQDGLQAVP 1212
             K+GD+AGPRVLEHIVDVVLYMEGEKYS+HR LR VKNRFGSTDELGVFEMSQ GL  V 
Sbjct: 283  NKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRLLRPVKNRFGSTDELGVFEMSQLGLAVVS 342

Query: 1213 NPSDIFLSEQHSDSEILVGLAVAVIIDGSRSFLLEIQALCLPDTLVPRQFNGVQKKRSEM 1392
            NPS+IFL+EQHSDS+ L GLAVAVI+DGSRSFL+EIQALC+  + V R  NG+Q  R++M
Sbjct: 343  NPSEIFLTEQHSDSDFLAGLAVAVIMDGSRSFLIEIQALCVSGSSVSRHINGIQSSRADM 402

Query: 1393 IISVLTKQAGLMLQNNAIFVNVVSGVNLQETAGDLAIAAAICSSFLEFPIPN 1548
            IISVL KQAGLMLQ NAIF+NVVSGV L ETAGD+AIAAAICSSFLEFPIPN
Sbjct: 403  IISVLIKQAGLMLQENAIFLNVVSGVMLTETAGDVAIAAAICSSFLEFPIPN 454


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
            gi|355521082|gb|AET01536.1| DNA repair protein radA-like
            protein [Medicago truncatula]
          Length = 643

 Score =  518 bits (1335), Expect = e-144
 Identities = 266/414 (64%), Positives = 321/414 (77%), Gaps = 2/414 (0%)
 Frame = +1

Query: 313  KNKKGKTKTYWVCSGCGKEFGKWWGSCTSCGEE--LKEFLEPENVDCKTTGYSVTDKVVG 486
            K KKGK K YWVCS CG   G+WWG C SC     +KEF E ++ + K +G+SV +  +G
Sbjct: 73   KKKKGKEKVYWVCSDCGYSTGQWWGVCRSCSVSGTMKEFHEVKSSE-KVSGFSVLEDGLG 131

Query: 487  SWFHQKAGELLPQRVTDVNKGINQLTWKIPLSGLFGAEXXXXXXXXXXXXXXXXXXXXXX 666
            SW  +K+GEL P R+++VN+G++ L W+I LSG FG E                      
Sbjct: 132  SWLPEKSGELRPLRLSEVNRGVDHLHWRIRLSGPFGNEVSRVLGGGLVPGSLTLVGGDPG 191

Query: 667  XXKSTLLLQIAAMIAEGDGSGRPAPVVYVSGEESVEQIANRADRMRIGTEDLFLYSGTDI 846
              KSTLLLQ+AAM+AEGD     +PVVYVSGEESVEQI NRADR+ IG+ D++LYS  DI
Sbjct: 192  VGKSTLLLQVAAMLAEGDEDVGASPVVYVSGEESVEQIGNRADRLTIGS-DIYLYSSNDI 250

Query: 847  EDILEKIHALSPRALIVDSIQTVYLKGVAGSAGGMVQVKECTQSLLRFAKKTNIPVLLIG 1026
            EDIL+K+  +SPRAL+VDS+QTVYLKG+ GS GG++QVKECT +LLRFAK TNIPVLLIG
Sbjct: 251  EDILKKVQYISPRALVVDSVQTVYLKGIMGSPGGIMQVKECTSALLRFAKTTNIPVLLIG 310

Query: 1027 HVTKAGDLAGPRVLEHIVDVVLYMEGEKYSAHRFLRSVKNRFGSTDELGVFEMSQDGLQA 1206
            HVTK+GD+AGPRVLEHIVDVVLYMEGEKY++HR LR+VKNRFGSTDELGVFEMS  GLQA
Sbjct: 311  HVTKSGDIAGPRVLEHIVDVVLYMEGEKYTSHRMLRAVKNRFGSTDELGVFEMSHSGLQA 370

Query: 1207 VPNPSDIFLSEQHSDSEILVGLAVAVIIDGSRSFLLEIQALCLPDTLVPRQFNGVQKKRS 1386
            V N S++FLSEQ  DS++L GLAVAVI+DGSR+FL+EIQALCL  +   RQFNG+Q  R+
Sbjct: 371  VSNASEMFLSEQDLDSDVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRA 430

Query: 1387 EMIISVLTKQAGLMLQNNAIFVNVVSGVNLQETAGDLAIAAAICSSFLEFPIPN 1548
            +MIISVL KQAGL LQ +A+F+NVVSG+ + ETAGDLAIAAAICSS LE PIPN
Sbjct: 431  DMIISVLIKQAGLRLQEHAVFLNVVSGLTVTETAGDLAIAAAICSSCLELPIPN 484


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  512 bits (1318), Expect = e-142
 Identities = 275/436 (63%), Positives = 323/436 (74%), Gaps = 3/436 (0%)
 Frame = +1

Query: 250  RGGDRASPKSGDHLSMGMSVSKNKKGKTKTYWVCSGCGKEFGKWWGSCTSCGEE--LKEF 423
            +G +R     G  + +G    K K GK K  WVC  CG   G+WWG C SC     +KE 
Sbjct: 55   KGKERGRVIGGGGVFIGR---KKKAGKEKVQWVCCNCGYSAGQWWGMCRSCSVSGTMKE- 110

Query: 424  LEPENVDCKTTGYSVT-DKVVGSWFHQKAGELLPQRVTDVNKGINQLTWKIPLSGLFGAE 600
             +  + D   +G+SV  D VVGSW  Q+ GE+ P R+T+VNKG++   W+IPLSG FG E
Sbjct: 111  AKFSDADTVVSGFSVLEDGVVGSWLPQQEGEMRPLRLTEVNKGLDHHHWRIPLSGPFGDE 170

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXKSTLLLQIAAMIAEGDGSGRPAPVVYVSGEESVEQI 780
                                    KSTLLLQIAA+IA+GD  G   PVVYVSGEESVEQI
Sbjct: 171  VSRVFGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAKGDSDGEACPVVYVSGEESVEQI 230

Query: 781  ANRADRMRIGTEDLFLYSGTDIEDILEKIHALSPRALIVDSIQTVYLKGVAGSAGGMVQV 960
             NRADR+RI + D++LYS  D+EDIL+K+  LSP ALIVDSIQTVYLKG+ GS GG++QV
Sbjct: 231  GNRADRLRIES-DIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGIMQV 289

Query: 961  KECTQSLLRFAKKTNIPVLLIGHVTKAGDLAGPRVLEHIVDVVLYMEGEKYSAHRFLRSV 1140
            KECT +LLRFAKKTNIPVLLIGHVTK+GD+AGPRVLEHIVDVVLYMEGEKYS+HR LR+V
Sbjct: 290  KECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRAV 349

Query: 1141 KNRFGSTDELGVFEMSQDGLQAVPNPSDIFLSEQHSDSEILVGLAVAVIIDGSRSFLLEI 1320
            KNRFGS DELGVFEMS  GLQAV N S++FLSEQ  DSEIL GLAVAVI+DGSR+FL+EI
Sbjct: 350  KNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEI 409

Query: 1321 QALCLPDTLVPRQFNGVQKKRSEMIISVLTKQAGLMLQNNAIFVNVVSGVNLQETAGDLA 1500
            QALCL  +   RQ NG+Q+KR++MIISVL KQAGL LQ +A+F+NVVSG+ L ETAGDLA
Sbjct: 410  QALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLA 469

Query: 1501 IAAAICSSFLEFPIPN 1548
            IAAAICSS LE PIPN
Sbjct: 470  IAAAICSSCLEIPIPN 485


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