BLASTX nr result

ID: Aconitum21_contig00000704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000704
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   205   1e-50
ref|XP_002320386.1| methyl binding domain protein [Populus trich...   205   1e-50
ref|XP_002331766.1| methyl binding domain protein [Populus trich...   204   2e-50
ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycin...   195   9e-48
ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-contain...   192   7e-47

>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  205 bits (521), Expect = 1e-50
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = +2

Query: 143 SISMYSVQCGKCFKWRIIPTQEEYEEIRKDFIDDPWFCNKKPNVSCEDPADIDYDSTRTW 322
           S+  Y+ QC KC KWR+I T+EEYEEIR   +++P++CN+KP +SCEDPADI+ D++RTW
Sbjct: 3   SVDTYAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTW 62

Query: 323 VMDKPNLPKTPAGFKKTLVVRRDFSKCDAYYRLPTGKKVRTMSEIERFLKANPKYKSKVK 502
           V+DKP LPKTP GFK++LV+RRDFSK DAYY  PTGKK+RT +EI  FL+ANPKYK  V 
Sbjct: 63  VIDKPGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYKG-VS 121

Query: 503 LSDFNFTTPKVMEDTVP 553
           + DFNFT+PKVME+TVP
Sbjct: 122 IEDFNFTSPKVMEETVP 138


>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  205 bits (521), Expect = 1e-50
 Identities = 94/153 (61%), Positives = 118/153 (77%), Gaps = 2/153 (1%)
 Frame = +2

Query: 101 PSSTQWQKGNPSTS--SISMYSVQCGKCFKWRIIPTQEEYEEIRKDFIDDPWFCNKKPNV 274
           P + +    NP  +  SI  Y+ QC KC KWR+I T+EEYEEIR    + P+ CN+KP V
Sbjct: 8   PETPKTSSKNPRVAVRSIDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGV 67

Query: 275 SCEDPADIDYDSTRTWVMDKPNLPKTPAGFKKTLVVRRDFSKCDAYYRLPTGKKVRTMSE 454
           SC+DPADI+Y++TRTWV+D+P +PKTP GFK++LV+RRDFSK DAYY  PTGKK+RT +E
Sbjct: 68  SCDDPADIEYNATRTWVIDRPGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNE 127

Query: 455 IERFLKANPKYKSKVKLSDFNFTTPKVMEDTVP 553
           I  F+ ANPKYK  V LSDFNFT+PKVMEDT+P
Sbjct: 128 IAAFIDANPKYKD-VNLSDFNFTSPKVMEDTIP 159


>ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
           gi|224117178|ref|XP_002331767.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
           gi|222874359|gb|EEF11490.1| methyl binding domain
           protein [Populus trichocarpa]
           gi|222874360|gb|EEF11491.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
          Length = 182

 Score =  204 bits (518), Expect = 2e-50
 Identities = 93/153 (60%), Positives = 120/153 (78%), Gaps = 2/153 (1%)
 Frame = +2

Query: 101 PSSTQWQKGNPSTS--SISMYSVQCGKCFKWRIIPTQEEYEEIRKDFIDDPWFCNKKPNV 274
           P + +    NP  +  SI  Y+ QC KC KWR+IPT+EEYEEIR    ++P+ C++KP V
Sbjct: 8   PETPKTSPKNPRVAVRSIDTYAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYVCDRKPGV 67

Query: 275 SCEDPADIDYDSTRTWVMDKPNLPKTPAGFKKTLVVRRDFSKCDAYYRLPTGKKVRTMSE 454
           SC+DPADI+Y++TRTWV+D+P +PKTP GFK++LV+RRDFSK DAYY  PTGKK+RT +E
Sbjct: 68  SCDDPADIEYNATRTWVIDRPGVPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNE 127

Query: 455 IERFLKANPKYKSKVKLSDFNFTTPKVMEDTVP 553
           I  F++ANPKYK  V LS FNFT+PKVMEDT+P
Sbjct: 128 IAAFIEANPKYKD-VNLSAFNFTSPKVMEDTIP 159


>ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
           gi|255641529|gb|ACU21038.1| unknown [Glycine max]
          Length = 177

 Score =  195 bits (496), Expect = 9e-48
 Identities = 91/171 (53%), Positives = 125/171 (73%)
 Frame = +2

Query: 74  KAAVEVIMLPSSTQWQKGNPSTSSISMYSVQCGKCFKWRIIPTQEEYEEIRKDFIDDPWF 253
           K+  E+   PSS+   K   S  S+ +Y+ QC  C KWR I TQEE+EEIR    ++P+ 
Sbjct: 2   KSGQEISKTPSSS---KRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPFL 58

Query: 254 CNKKPNVSCEDPADIDYDSTRTWVMDKPNLPKTPAGFKKTLVVRRDFSKCDAYYRLPTGK 433
           C++K N SC++P DI+YDSTRTWV+DKPNLPKTP GFK++LV+R+D+SK DAYY  P GK
Sbjct: 59  CSRKANSSCDEPGDIEYDSTRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGK 118

Query: 434 KVRTMSEIERFLKANPKYKSKVKLSDFNFTTPKVMEDTVPGM*QEKDLGMK 586
           K+RT +EI  FLK NP++K  V  SDF+F++PK+M+DT+P + ++KD   K
Sbjct: 119 KLRTRNEIAAFLKDNPEFKG-VSASDFDFSSPKIMQDTIPEIIEQKDSANK 168


>ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           [Glycine max]
          Length = 193

 Score =  192 bits (488), Expect = 7e-47
 Identities = 90/171 (52%), Positives = 123/171 (71%)
 Frame = +2

Query: 74  KAAVEVIMLPSSTQWQKGNPSTSSISMYSVQCGKCFKWRIIPTQEEYEEIRKDFIDDPWF 253
           K   E+   PSS+   K   S  S+ +Y+ QC  C KWR I TQEE+EEIR    ++P+ 
Sbjct: 18  KGGQEISKTPSSS---KRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVAEEPFL 74

Query: 254 CNKKPNVSCEDPADIDYDSTRTWVMDKPNLPKTPAGFKKTLVVRRDFSKCDAYYRLPTGK 433
           C++K N SC++P DI YDS+RTWV+DKPNLPKTP GFK++LV+R+D+SK DAYY  P GK
Sbjct: 75  CSRKANSSCDEPGDIKYDSSRTWVIDKPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGK 134

Query: 434 KVRTMSEIERFLKANPKYKSKVKLSDFNFTTPKVMEDTVPGM*QEKDLGMK 586
           K+RT +EI  FLK NP++K  V  SDF+F++PK+M+DT+P + ++KD   K
Sbjct: 135 KLRTRNEIAAFLKDNPEFKG-VSASDFDFSSPKIMQDTIPEVVEQKDSANK 184


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