BLASTX nr result
ID: Aconitum21_contig00000561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00000561
(1594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote... 647 0.0
emb|CBI16387.3| unnamed protein product [Vitis vinifera] 636 e-180
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 635 e-180
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2... 597 e-168
ref|XP_002513488.1| nuclear acid binding protein, putative [Rici... 595 e-168
>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
1 [Vitis vinifera]
Length = 447
Score = 647 bits (1670), Expect = 0.0
Identities = 313/424 (73%), Positives = 358/424 (84%), Gaps = 4/424 (0%)
Frame = -2
Query: 1593 STATPTAQYTQHGHHQPTTLEEIRTLWIGDLQYWVDENYLHTCFAHTGEVLSIKIIRNKI 1414
S AT ++ + + QPT++EE+RTLWIGDLQYWVDENYLH+CFAHTGEV+SIKIIRNKI
Sbjct: 18 SAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKI 77
Query: 1413 TGQPEGYGFVEFVSHGAAERVLQSYNGALMPGTEQTFRLNWASFGIGERRPDAGPDHSIF 1234
TGQPEGYGFVEFVSH AAER+LQ+YNG MPGTEQTFRLNWASFGIGERRPDAGP+HSIF
Sbjct: 78 TGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIF 137
Query: 1233 VGDLSPDVTDYTLQETFRVQYPSVRGAKVVTDPSTGRSKGYGFVKFADEMERNRAMTEMN 1054
VGDL+PDVTDY LQETFR QYPSVRGAKVVTDP+TGR+KGYGFVKF+DEMERNRAMTEMN
Sbjct: 138 VGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMN 197
Query: 1053 GVYCSARPMRISAATPKKTTGFQQPY-TAPKAVYPAPAYSTPVVQPFPAVENDINNTTIY 877
GVYCS RPMRISAATPKKTTGFQQ Y A KA+YPAPAY+TP +Q PA +NDINNTTI+
Sbjct: 198 GVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIF 256
Query: 876 VGSLDPNITEEELRQIFAQFGELVSVKIPPTKGCGFVQFVNRQSAEEAMLRLNGTMIGQL 697
VG+LDPN+TEEEL+QIF+QFGELV VKIP +GCGFVQF R SAEEA+ R+ GT+IGQL
Sbjct: 257 VGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQL 316
Query: 696 AIRLSWGKS---KQEQTGAWAQPVDPNQWSAAYYGYGQGYESYAYGAAQDPSLXXXXXXX 526
+R+SWG+S KQ+ G+W Q DP+QWS+AYYGYGQGY++Y YGA QDPSL
Sbjct: 317 VVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYA 376
Query: 525 XXXXXXXQVEGMPETVAMAATTPAVEQREEPYDPLSIPDVDKLNAAYLSVHGSTMVGRPL 346
Q EG+ + AMA PAVEQR+E YDPL+ PDVDKLNAAYL+VHGS ++GR L
Sbjct: 377 GYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSL 436
Query: 345 WLKT 334
WLKT
Sbjct: 437 WLKT 440
>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 636 bits (1641), Expect = e-180
Identities = 310/424 (73%), Positives = 354/424 (83%), Gaps = 4/424 (0%)
Frame = -2
Query: 1593 STATPTAQYTQHGHHQPTTLEEIRTLWIGDLQYWVDENYLHTCFAHTGEVLSIKIIRNKI 1414
S AT ++ + + QPT++EE+RTLWIGDLQYWVDENYLH+CFAHTGEV+SIKIIRNKI
Sbjct: 18 SAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKI 77
Query: 1413 TGQPEGYGFVEFVSHGAAERVLQSYNGALMPGTEQTFRLNWASFGIGERRPDAGPDHSIF 1234
TGQPEGYGFVEFVSH AAER+LQ+YNG MPGTEQTFRLNWASFGIGERRPDAGP+HSIF
Sbjct: 78 TGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIF 137
Query: 1233 VGDLSPDVTDYTLQETFRVQYPSVRGAKVVTDPSTGRSKGYGFVKFADEMERNRAMTEMN 1054
VGDL+PDVTDY LQETFR QYPSVRGAKVVTDP+TGR+KGYGFVKF+DEMERNRAMTEMN
Sbjct: 138 VGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMN 197
Query: 1053 GVYCSARPMRISAATPKKTTGFQQPY-TAPKAVYPAPAYSTPVVQPFPAVENDINNTTIY 877
GVYCS RPMRISAATPKKTTGFQQ Y A KA+YPAPAY+TP +Q PA +NDINNTTI+
Sbjct: 198 GVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIF 256
Query: 876 VGSLDPNITEEELRQIFAQFGELVSVKIPPTKGCGFVQFVNRQSAEEAMLRLNGTMIGQL 697
VG+LDPN+TEEEL+QIF+QFGELV VKIP +GCGFVQF R SAEEA+ R+ GT+IGQL
Sbjct: 257 VGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQL 316
Query: 696 AIRLSWGKS---KQEQTGAWAQPVDPNQWSAAYYGYGQGYESYAYGAAQDPSLXXXXXXX 526
+R+SWG+S KQ+ G+W Q DP+QWS+AYYGYGQGY++Y YGA QDPSL
Sbjct: 317 VVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYA 376
Query: 525 XXXXXXXQVEGMPETVAMAATTPAVEQREEPYDPLSIPDVDKLNAAYLSVHGSTMVGRPL 346
+ AMA PAVEQR+E YDPL+ PDVDKLNAAYL+VHGS ++GR L
Sbjct: 377 GYLQYPQ--QARYYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSL 434
Query: 345 WLKT 334
WLKT
Sbjct: 435 WLKT 438
>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
2 [Vitis vinifera]
Length = 438
Score = 635 bits (1638), Expect = e-180
Identities = 309/421 (73%), Positives = 353/421 (83%), Gaps = 1/421 (0%)
Frame = -2
Query: 1593 STATPTAQYTQHGHHQPTTLEEIRTLWIGDLQYWVDENYLHTCFAHTGEVLSIKIIRNKI 1414
S AT ++ + + QPT++EE+RTLWIGDLQYWVDENYLH+CFAHTGEV+SIKIIRNKI
Sbjct: 18 SAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKI 77
Query: 1413 TGQPEGYGFVEFVSHGAAERVLQSYNGALMPGTEQTFRLNWASFGIGERRPDAGPDHSIF 1234
TGQPEGYGFVEFVSH AAER+LQ+YNG MPGTEQTFRLNWASFGIGERRPDAGP+HSIF
Sbjct: 78 TGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIF 137
Query: 1233 VGDLSPDVTDYTLQETFRVQYPSVRGAKVVTDPSTGRSKGYGFVKFADEMERNRAMTEMN 1054
VGDL+PDVTDY LQETFR QYPSVRGAKVVTDP+TGR+KGYGFVKF+DEMERNRAMTEMN
Sbjct: 138 VGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMN 197
Query: 1053 GVYCSARPMRISAATPKKTTGFQQPY-TAPKAVYPAPAYSTPVVQPFPAVENDINNTTIY 877
GVYCS RPMRISAATPKKTTGFQQ Y A KA+YPAPAY+TP +Q PA +NDINNTTI+
Sbjct: 198 GVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIF 256
Query: 876 VGSLDPNITEEELRQIFAQFGELVSVKIPPTKGCGFVQFVNRQSAEEAMLRLNGTMIGQL 697
VG+LDPN+TEEEL+QIF+QFGELV VKIP +GCGFVQF R SAEEA+ R+ GT+IGQL
Sbjct: 257 VGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQL 316
Query: 696 AIRLSWGKSKQEQTGAWAQPVDPNQWSAAYYGYGQGYESYAYGAAQDPSLXXXXXXXXXX 517
+R+SWG+S A+ DP+QWS+AYYGYGQGY++Y YGA QDPSL
Sbjct: 317 VVRISWGRSPT------AKQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYL 370
Query: 516 XXXXQVEGMPETVAMAATTPAVEQREEPYDPLSIPDVDKLNAAYLSVHGSTMVGRPLWLK 337
Q EG+ + AMA PAVEQR+E YDPL+ PDVDKLNAAYL+VHGS ++GR LWLK
Sbjct: 371 QYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLK 430
Query: 336 T 334
T
Sbjct: 431 T 431
>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 597 bits (1540), Expect = e-168
Identities = 296/418 (70%), Positives = 330/418 (78%)
Frame = -2
Query: 1587 ATPTAQYTQHGHHQPTTLEEIRTLWIGDLQYWVDENYLHTCFAHTGEVLSIKIIRNKITG 1408
A PTA G+HQP TLEE+RTLWIGDLQYW DE+YL +CFAHTGEV+SIKIIRNK+TG
Sbjct: 2 AAPTAP---GGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTG 58
Query: 1407 QPEGYGFVEFVSHGAAERVLQSYNGALMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVG 1228
QPEGYGFVEFVSH AAER+LQ+YNG MPGTEQTFRLNWASFGIGERRPDAGP+HSIFVG
Sbjct: 59 QPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVG 118
Query: 1227 DLSPDVTDYTLQETFRVQYPSVRGAKVVTDPSTGRSKGYGFVKFADEMERNRAMTEMNGV 1048
DL+PDVTDY LQETFRV YPSVRGAKVVTDP+TGRSKGYGFVKFADE ERNRAMTEMNGV
Sbjct: 119 DLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGV 178
Query: 1047 YCSARPMRISAATPKKTTGFQQPYTAPKAVYPAPAYSTPVVQPFPAVENDINNTTIYVGS 868
+CS RPMRIS ATPKKTT FQQ Y PKA YPAPAY+ PV + + D+ NTTI+VG+
Sbjct: 179 FCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPV--QVVSADGDVTNTTIFVGN 236
Query: 867 LDPNITEEELRQIFAQFGELVSVKIPPTKGCGFVQFVNRQSAEEAMLRLNGTMIGQLAIR 688
LDPN TEE+LRQ F Q GE+ SVKIP +GCGFVQF R SAEEA+ R+ G +IGQ +R
Sbjct: 237 LDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVR 296
Query: 687 LSWGKSKQEQTGAWAQPVDPNQWSAAYYGYGQGYESYAYGAAQDPSLXXXXXXXXXXXXX 508
+SWGK KQ+ T W Q VD QW+ AYYGYGQGY++YAYG DPSL
Sbjct: 297 ISWGK-KQDLTATWGQQVD--QWN-AYYGYGQGYDAYAYGGTHDPSLYAYNAYAGYPQYP 352
Query: 507 XQVEGMPETVAMAATTPAVEQREEPYDPLSIPDVDKLNAAYLSVHGSTMVGRPLWLKT 334
QVEG P+ MA P E REE YDPL+ PDVDKLNAAYLS HGS + GR LW+KT
Sbjct: 353 QQVEGAPD---MAGVVPVAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRTLWMKT 407
>ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein,
putative [Ricinus communis]
Length = 412
Score = 595 bits (1535), Expect = e-168
Identities = 298/418 (71%), Positives = 334/418 (79%)
Frame = -2
Query: 1587 ATPTAQYTQHGHHQPTTLEEIRTLWIGDLQYWVDENYLHTCFAHTGEVLSIKIIRNKITG 1408
A PTA G+HQP TLEE+RTLWIGDLQYWVDENYL +CFAHTGEVLSIKIIRNKITG
Sbjct: 2 AAPTAT-NPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITG 60
Query: 1407 QPEGYGFVEFVSHGAAERVLQSYNGALMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVG 1228
QPEGYGFVEFVSH AAER+LQ+YNG MPGTEQTFRLNWASFGIGERRPDAGP+HSIFVG
Sbjct: 61 QPEGYGFVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVG 120
Query: 1227 DLSPDVTDYTLQETFRVQYPSVRGAKVVTDPSTGRSKGYGFVKFADEMERNRAMTEMNGV 1048
DLSPDVTDY LQETFR YPSVRGAKVVTDP+TGRSKGYGFVKF DE ERNRAMTEMNGV
Sbjct: 121 DLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGV 180
Query: 1047 YCSARPMRISAATPKKTTGFQQPYTAPKAVYPAPAYSTPVVQPFPAVENDINNTTIYVGS 868
+CS RPMRISAATPKKT +QQ Y KA+YP PAY+ P VQ PA +NDI NTTI+VG+
Sbjct: 181 FCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAP-VQVVPA-DNDITNTTIFVGN 238
Query: 867 LDPNITEEELRQIFAQFGELVSVKIPPTKGCGFVQFVNRQSAEEAMLRLNGTMIGQLAIR 688
LDPN+TEEELR IF QFGE+V VKIP +GCGFVQF R SAEEA+ R+ G +IGQ +R
Sbjct: 239 LDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVR 298
Query: 687 LSWGKSKQEQTGAWAQPVDPNQWSAAYYGYGQGYESYAYGAAQDPSLXXXXXXXXXXXXX 508
+SWG+ + T + +QWS AYYGYGQGY++YAYGA QDPSL
Sbjct: 299 ISWGRKQARST------LILDQWS-AYYGYGQGYDAYAYGATQDPSLYAYGAYAGYPQYP 351
Query: 507 XQVEGMPETVAMAATTPAVEQREEPYDPLSIPDVDKLNAAYLSVHGSTMVGRPLWLKT 334
QV+G+ + M P VEQREE YDPL+ PDVDKLN AYLSVHG+ ++GRPLW+KT
Sbjct: 352 QQVDGVQD---MTGAIPVVEQREELYDPLAAPDVDKLNGAYLSVHGNAILGRPLWMKT 406