BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000295
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]   222   3e-56
emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]   217   1e-54
emb|CBI29077.3| unnamed protein product [Vitis vinifera]              216   3e-54
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   213   2e-53

>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  223 bits (568), Expect = 2e-56
 Identities = 102/200 (51%), Positives = 144/200 (72%)
 Frame = +2

Query: 2   WNTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANM 181
           WN+++AG+ K G VE +  +F EMP R+V SW++M+  YAQ  +PN AL LFD+M    +
Sbjct: 326 WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
           KP  A +VS LSACA++GALD+G  +H Y++ N++  ++IV T L+DMYAKCG I  A +
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445

Query: 362 VFDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGL 541
           VF+A ESKDV  W  +I G+A++G+ K+A QLF+EM++AGV PND+TFV +L ACSH G+
Sbjct: 446 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 505

Query: 542 VELAKKYFDSMRIVYNIDPK 601
           V+  +K  D M   Y I+PK
Sbjct: 506 VDEGQKLLDCMSSSYGIEPK 525



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/181 (27%), Positives = 96/181 (53%)
 Frame = +2

Query: 5   NTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANMK 184
           ++L+  YA    +  ++++F+    R+V SW+ MI  Y +  +   A ++FD M   ++ 
Sbjct: 234 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDV- 292

Query: 185 PNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVRV 364
            +W  +++G    A VG +D  KR+   + +  +    +   +++  + KCG++E+A  +
Sbjct: 293 ISWNTMINGY---AIVGKIDEAKRLFDEMPERNL----VSWNSMLAGFVKCGNVEDAFGL 345

Query: 365 FDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGLV 544
           F     +DV  W +M+   A  G   +AL LF +M   GV+P + T V +L AC+H G +
Sbjct: 346 FSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 405

Query: 545 E 547
           +
Sbjct: 406 D 406



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/175 (23%), Positives = 82/175 (46%)
 Frame = +2

Query: 50  SREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANMKPNWAAIVSGLSACAN 229
           ++ IF  +     S ++++I A +    P  AL L+  M ++ +KP+       + AC  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 230 VGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVRVFDAFESKDVFVWTAM 409
                 G  +H +V ++    D+ + ++LI +YA    +  A ++F+   ++DV  W AM
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 410 IGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGLVELAKKYFDSM 574
           I G   +     A  +F  M    V  + +++  ++   +  G ++ AK+ FD M
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEM 318


>emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  222 bits (566), Expect = 3e-56
 Identities = 101/200 (50%), Positives = 143/200 (71%)
 Frame = +2

Query: 2   WNTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANM 181
           WN++++G+ K G VE +  +F EMP R+V SW++M+  YAQ  +PN AL LFD+M    +
Sbjct: 131 WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
           KP  A +VS LSACA++GALD+G  +H Y++ N++  ++IV T L+DMYAKCG I  A +
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250

Query: 362 VFDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGL 541
           VF+A ESKDV  W  +I G+A++GH K+A QLF+EM++A V PND+TFV +L ACSH G+
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310

Query: 542 VELAKKYFDSMRIVYNIDPK 601
           V+  +K  D M   Y I+PK
Sbjct: 311 VDEGQKLLDCMSSSYGIEPK 330



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/181 (28%), Positives = 94/181 (51%)
 Frame = +2

Query: 5   NTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANMK 184
           N+L+  YA    +  ++++F    +R+V SW+ MI  Y +  +     ++FD M   ++ 
Sbjct: 39  NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV- 97

Query: 185 PNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVRV 364
            +W  I++G    A VG +D  KR+   + +  +    +   +++  + KCG++E A  +
Sbjct: 98  ISWNTIINGY---AIVGKIDEAKRLFDEMPERNL----VSWNSMLSGFVKCGNVEEAFGL 150

Query: 365 FDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGLV 544
           F     +DV  W +M+   A  G   +AL LF +M   GV+P + T V +L AC+H G +
Sbjct: 151 FSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 210

Query: 545 E 547
           +
Sbjct: 211 D 211


>emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
          Length = 496

 Score =  217 bits (553), Expect = 1e-54
 Identities = 101/199 (50%), Positives = 142/199 (71%)
 Frame = +2

Query: 5   NTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANMK 184
           N+++ G+ K G VE +  +F EMP R+V SW++M+  YAQ  +PN AL LFD+M    +K
Sbjct: 131 NSMLXGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVK 190

Query: 185 PNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVRV 364
           P+ A +VS LSACA++GALD+G  +H Y++ N++  ++IV T L+DMYAKCG I  A +V
Sbjct: 191 PSEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQV 250

Query: 365 FDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGLV 544
           F+A ESKDV  W  +I G+A+ GH K+A QLF+EM++AGV PND+TFV +L ACSH G+V
Sbjct: 251 FNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMV 310

Query: 545 ELAKKYFDSMRIVYNIDPK 601
           +  +K  D M   Y I+PK
Sbjct: 311 DEGQKLLDCMSSSYGIEPK 329



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 53/182 (29%), Positives = 85/182 (46%)
 Frame = +2

Query: 2   WNTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANM 181
           WN ++ GY K G +  +R +FD M  R+V SW+TMI  YA   + + A  LFDEM + N+
Sbjct: 68  WNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 127

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
                                                  +   +++  + KCG++E+A  
Sbjct: 128 ---------------------------------------VSXNSMLXGFVKCGNVEDAFG 148

Query: 362 VFDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGL 541
           +F     +DV  W +M+   A  G   +AL LF +M   GV+P++ T V +L AC+H G 
Sbjct: 149 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSACAHLGA 208

Query: 542 VE 547
           ++
Sbjct: 209 LD 210


>emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  216 bits (549), Expect = 3e-54
 Identities = 100/200 (50%), Positives = 139/200 (69%)
 Frame = +2

Query: 2   WNTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANM 181
           WN ++ GY K   +  +R +FD M  R+V SW+TMI  YA   +PN AL LFD+M    +
Sbjct: 235 WNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGV 294

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
           KP  A +VS LSACA++GALD+G  +H Y++ N++  ++IV T L+DMYAKCG I  A +
Sbjct: 295 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 354

Query: 362 VFDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGL 541
           VF+A ESKDV  W  +I G+A++G+ K+A QLF+EM++AGV PND+TFV +L ACSH G+
Sbjct: 355 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 414

Query: 542 VELAKKYFDSMRIVYNIDPK 601
           V+  +K  D M   Y I+PK
Sbjct: 415 VDEGQKLLDCMSSSYGIEPK 434



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
 Frame = +2

Query: 50  SREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANMKPNWAAIVSGLSACAN 229
           ++ IF  +     S ++++I A +    P  AL L+  M ++ +KP+       + AC  
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 230 VGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVRVFDAFESKDVFVWTA- 406
                 G  +H +V ++    D+ + ++LI +YA    +  A ++F+   ++DV  W A 
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 407 ------------------------------MIGGLAVNGHGKKALQLFREMEDAGVRPND 496
                                         MI G A+ G   +AL LF +M   GV+P +
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298

Query: 497 VTFVGVLCACSHGGLVE 547
            T V +L AC+H G ++
Sbjct: 299 ATVVSLLSACAHLGALD 315


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  213 bits (542), Expect = 2e-53
 Identities = 100/200 (50%), Positives = 143/200 (71%)
 Frame = +2

Query: 2   WNTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEMEKANM 181
           W T+V+GYA  G +E +RE+F+  P R+V  W+ MI  Y Q+++ + A+ LF EM+   +
Sbjct: 307 WTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKV 366

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
           KP+   +VS L+ CA  GA+++GK IH ++D+N++  DA+V T LI+MYAKCG IE A+ 
Sbjct: 367 KPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALE 426

Query: 362 VFDAFESKDVFVWTAMIGGLAVNGHGKKALQLFREMEDAGVRPNDVTFVGVLCACSHGGL 541
           +F     KD   WT++I GLA+NG   KAL+LF +M+ AGVRP+D+TF+GVL ACSHGGL
Sbjct: 427 IFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGL 486

Query: 542 VELAKKYFDSMRIVYNIDPK 601
           VE  +K+F+SMR+ Y I PK
Sbjct: 487 VEEGRKFFNSMRMEYQIKPK 506



 Score =  118 bits (296), Expect = 7e-25
 Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 35/227 (15%)
 Frame = +2

Query: 5   NTLVAGYAKSGLVERSREIFDEMPERNVSSWSTMITAYAQWDQPNRALVLFDEM-EKANM 181
           N+L+  YA+  L +  + +FDEMP+R+V SW+ MI+ Y +  +   A+ +F  M E++ +
Sbjct: 176 NSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGL 235

Query: 182 KPNWAAIVSGLSACANVGALDRGKRIHLYVDQNKMRADAIVATTLIDMYAKCGSIENAVR 361
            P+ A +VS LSAC  +  L+ GK+IH YV  N ++   I+   L+DMY KCG +  A  
Sbjct: 236 MPDEATVVSTLSACTALKRLELGKKIHHYVRDN-VKFTPIIGNALLDMYCKCGCLSIARA 294

Query: 362 VFDAFESKDVFVWTAMIGGLA--------------------------VNGHGK-----KA 448
           VF+   SK+V  WT M+ G A                          +NG+ +     +A
Sbjct: 295 VFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEA 354

Query: 449 LQLFREMEDAGVRPNDVTFVGVLCACSHGGLVELAK---KYFDSMRI 580
           + LFREM+   V+P+    V +L  C+  G +E  K   ++ D  RI
Sbjct: 355 VALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRI 401



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
 Frame = +2

Query: 95  WSTMITAYAQWDQPNRALVLFDEMEKANMKPNWAAIVSGLSACANVGALDRGKRIHLYVD 274
           ++ +I A+A+     R LVLF ++ +  + P+         A   +G + + +++   V 
Sbjct: 105 YNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVT 164

Query: 275 QNKMRADAIVATTLIDMYAKCGSIENAVRVFDAFESKDVFVWTAMIGGLAVNGHGKKALQ 454
           +  +  D  V  +LIDMYA+    +    +FD    +DV  W  MI G       + A+ 
Sbjct: 165 KTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAIN 224

Query: 455 LF-REMEDAGVRPNDVTFVGVLCACSHGGLVELAKKYFDSMR 577
           +F R  E++G+ P++ T V  L AC+    +EL KK    +R
Sbjct: 225 VFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVR 266