BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000284
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   235   5e-60
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   230   1e-58
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   226   2e-57
gb|AEJ33935.1| chloroplast putative ribulose-1,5-bisphosphate ca...   226   3e-57
sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carbox...   224   1e-56

>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  235 bits (599), Expect = 5e-60
 Identities = 109/126 (86%), Positives = 115/126 (91%), Gaps = 1/126 (0%)
 Frame = -1

Query: 579 GGRVQCMKVWPPLGLLKFETLSYLPPLSNESLAKEVDYLLRNGWVPCLEFSLV-GIISRD 403
           GGRVQCMKVWPPLGL KFETLSYLPPL+NE LAKEVDYLLR+GWVPCLEF L  G + R+
Sbjct: 53  GGRVQCMKVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRE 112

Query: 402 YHSSPGYYDGRYWTMWKLPMFGCTDSSQVMAEVEECKKEYPNAFVRIIGFDNKRQVQCIS 223
            H SPGYYDGRYWTMWKLPMFGCTDSSQV+ EVEECKKEYPNAF+RIIGFDN RQVQCIS
Sbjct: 113 NHRSPGYYDGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCIS 172

Query: 222 FIAFKP 205
           FIAFKP
Sbjct: 173 FIAFKP 178


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  230 bits (587), Expect = 1e-58
 Identities = 105/126 (83%), Positives = 114/126 (90%), Gaps = 1/126 (0%)
 Frame = -1

Query: 579 GGRVQCMKVWPPLGLLKFETLSYLPPLSNESLAKEVDYLLRNGWVPCLEFSLV-GIISRD 403
           GGRVQCMKVWPPLGL KFETLSYLP L+ E L+KEVDYLLR+GWVPCLEF L  G + R+
Sbjct: 53  GGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYRE 112

Query: 402 YHSSPGYYDGRYWTMWKLPMFGCTDSSQVMAEVEECKKEYPNAFVRIIGFDNKRQVQCIS 223
           +H SPGYYDGRYWTMWKLPMFGCTDSSQV+ EVEECKKEYPNA++RIIGFDN RQVQCIS
Sbjct: 113 HHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCIS 172

Query: 222 FIAFKP 205
           FIAFKP
Sbjct: 173 FIAFKP 178


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  226 bits (576), Expect = 2e-57
 Identities = 103/126 (81%), Positives = 114/126 (90%), Gaps = 1/126 (0%)
 Frame = -1

Query: 579 GGRVQCMKVWPPLGLLKFETLSYLPPLSNESLAKEVDYLLRNGWVPCLEFSLV-GIISRD 403
           GGRVQCM+VWPP+G  KFETLSYLPPLS ESLAKEVDYLLR+GWVPCLEF L  G + R+
Sbjct: 51  GGRVQCMQVWPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYRE 110

Query: 402 YHSSPGYYDGRYWTMWKLPMFGCTDSSQVMAEVEECKKEYPNAFVRIIGFDNKRQVQCIS 223
           +HSSPGYYDGRYWTMWKLPMFGCTDS+QV+ E+EE KK YP AF+RIIGFDNKRQVQCIS
Sbjct: 111 HHSSPGYYDGRYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCIS 170

Query: 222 FIAFKP 205
           FIA+KP
Sbjct: 171 FIAYKP 176


>gb|AEJ33935.1| chloroplast putative ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit [Wolffia
           australiana]
          Length = 177

 Score =  226 bits (575), Expect = 3e-57
 Identities = 98/125 (78%), Positives = 114/125 (91%)
 Frame = -1

Query: 579 GGRVQCMKVWPPLGLLKFETLSYLPPLSNESLAKEVDYLLRNGWVPCLEFSLVGIISRDY 400
           GG+ +CM+VWPP GL KFETLSYLPPLS E+LAKEV+YL+RNGW+PC+EFS  G + R+Y
Sbjct: 52  GGKARCMQVWPPEGLKKFETLSYLPPLSTEALAKEVEYLIRNGWIPCIEFSKEGFVYREY 111

Query: 399 HSSPGYYDGRYWTMWKLPMFGCTDSSQVMAEVEECKKEYPNAFVRIIGFDNKRQVQCISF 220
           H+SPGYYDGRYWTMWKLPMFGCTD+SQV+AEVEE KK YP+ FVRIIGFDNKRQVQC+SF
Sbjct: 112 HASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPDYFVRIIGFDNKRQVQCVSF 171

Query: 219 IAFKP 205
           IA+KP
Sbjct: 172 IAYKP 176


>sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|217946|dbj|BAA03103.1|
           riburose-1,5-bisphosphate carboxylase/oxygenase small
           subunit precursor [Lactuca sativa]
          Length = 181

 Score =  224 bits (570), Expect = 1e-56
 Identities = 99/126 (78%), Positives = 113/126 (89%), Gaps = 1/126 (0%)
 Frame = -1

Query: 579 GGRVQCMKVWPPLGLLKFETLSYLPPLSNESLAKEVDYLLRNGWVPCLEFSLV-GIISRD 403
           GGRVQCMKVWPP+GL K+ETLSYLPPLS+E+L+KE+DYL+RN W+PCLEF L  G + R+
Sbjct: 52  GGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYRE 111

Query: 402 YHSSPGYYDGRYWTMWKLPMFGCTDSSQVMAEVEECKKEYPNAFVRIIGFDNKRQVQCIS 223
           +H SPGYYDGRYWTMWKLPMFGCTDS+QVM EV ECKKEYPNAF+R+IGFDN RQVQCIS
Sbjct: 112 HHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCIS 171

Query: 222 FIAFKP 205
           FI  KP
Sbjct: 172 FIVAKP 177