BLASTX nr result

ID: Aconitum21_contig00000225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000225
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 prec...   275   3e-85
gb|ACF82848.1| unknown [Zea mays]                                     275   3e-85
ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [S...   273   2e-84
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia...   271   6e-84
ref|NP_001105698.1| light harvesting chlorophyll a/b binding pro...   271   6e-84

>ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
           gi|733456|gb|AAA64415.1| chlorophyll a/b-binding
           apoprotein CP26 precursor [Zea mays]
          Length = 283

 Score =  275 bits (704), Expect(2) = 3e-85
 Identities = 129/154 (83%), Positives = 135/154 (87%)
 Frame = -2

Query: 778 IDEELAKWYGPERRIYLPDGLLDRSEIPEYLTGEVPGDYGYDPLGLGKKPENFSKYQAFE 599
           I +ELAKWYGP+RRIYLPDGLLDRSE+PEYLTGEVPGDYGYDP GLGKKPE+F+KYQA+E
Sbjct: 58  ISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYE 117

Query: 598 LIHARWAMLGAAGAVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINXXXX 419
           LIHARWAMLGAAGAVIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG SIPIN    
Sbjct: 118 LIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVVA 177

Query: 418 XXXXXXXXXXAEYYRITNGLDFEDKLHPGGPFDP 317
                     AEYYRITNGLD EDKLHPGGPFDP
Sbjct: 178 VIAEVVLVGGAEYYRITNGLDLEDKLHPGGPFDP 211



 Score = 67.0 bits (162), Expect(2) = 3e-85
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 200 AYVTGEGPIENLSAHLSDPFANNLLTVLQGSVERTPTL 87
           AYVTGEGP+ENL+ HLSDPF NNLLTV+ G+ ERTP+L
Sbjct: 246 AYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283


>gb|ACF82848.1| unknown [Zea mays]
          Length = 283

 Score =  275 bits (704), Expect(2) = 3e-85
 Identities = 129/154 (83%), Positives = 135/154 (87%)
 Frame = -2

Query: 778 IDEELAKWYGPERRIYLPDGLLDRSEIPEYLTGEVPGDYGYDPLGLGKKPENFSKYQAFE 599
           I +ELAKWYGP+RRIYLPDGLLDRSE+PEYLTGEVPGDYGYDP GLGKKPE+F+KYQA+E
Sbjct: 58  ISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYE 117

Query: 598 LIHARWAMLGAAGAVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINXXXX 419
           LIHARWAMLGAAGAVIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG SIPIN    
Sbjct: 118 LIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVVA 177

Query: 418 XXXXXXXXXXAEYYRITNGLDFEDKLHPGGPFDP 317
                     AEYYRITNGLD EDKLHPGGPFDP
Sbjct: 178 VIAEVILVGGAEYYRITNGLDLEDKLHPGGPFDP 211



 Score = 67.0 bits (162), Expect(2) = 3e-85
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 200 AYVTGEGPIENLSAHLSDPFANNLLTVLQGSVERTPTL 87
           AYVTGEGP+ENL+ HLSDPF NNLLTV+ G+ ERTP+L
Sbjct: 246 AYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283


>ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
           gi|241936406|gb|EES09551.1| hypothetical protein
           SORBIDRAFT_05g007070 [Sorghum bicolor]
          Length = 282

 Score =  273 bits (698), Expect(2) = 2e-84
 Identities = 128/154 (83%), Positives = 134/154 (87%)
 Frame = -2

Query: 778 IDEELAKWYGPERRIYLPDGLLDRSEIPEYLTGEVPGDYGYDPLGLGKKPENFSKYQAFE 599
           I +ELAKWYGP+RRIYLPDGLLDRSE+PEYLTGEVPGDYGYDP GLGKKPE+F+KYQA+E
Sbjct: 57  ISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYE 116

Query: 598 LIHARWAMLGAAGAVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINXXXX 419
           LIHARWAMLGAAGAVIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG SIPIN    
Sbjct: 117 LIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVVA 176

Query: 418 XXXXXXXXXXAEYYRITNGLDFEDKLHPGGPFDP 317
                     AEYYRI NGLD EDKLHPGGPFDP
Sbjct: 177 VIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDP 210



 Score = 67.0 bits (162), Expect(2) = 2e-84
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 200 AYVTGEGPIENLSAHLSDPFANNLLTVLQGSVERTPTL 87
           AYVTGEGP+ENL+ HLSDPF NNLLTV+ G+ ERTP+L
Sbjct: 245 AYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 282


>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
          Length = 285

 Score =  271 bits (694), Expect(2) = 6e-84
 Identities = 127/153 (83%), Positives = 134/153 (87%)
 Frame = -2

Query: 775 DEELAKWYGPERRIYLPDGLLDRSEIPEYLTGEVPGDYGYDPLGLGKKPENFSKYQAFEL 596
           DEELAKWYGP+RRI+LPDGLLDRSEIPEYL GEVPGDYGYDP GL KKPE+F+KYQA+EL
Sbjct: 61  DEELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 120

Query: 595 IHARWAMLGAAGAVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINXXXXX 416
           IHARWAMLGAAG VIPEAFNKFGA+CGPEAVWFKTGALLLDGNTLNYFGK+IPIN     
Sbjct: 121 IHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV 180

Query: 415 XXXXXXXXXAEYYRITNGLDFEDKLHPGGPFDP 317
                    AEYYRITNGLD EDKLHPGGPFDP
Sbjct: 181 VAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDP 213



 Score = 66.6 bits (161), Expect(2) = 6e-84
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 200 AYVTGEGPIENLSAHLSDPFANNLLTVLQGSVERTPTL 87
           AYVTG+GP+ENL+AHLSDPF NNLLTV+ G+ ER PTL
Sbjct: 248 AYVTGKGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 285


>ref|NP_001105698.1| light harvesting chlorophyll a/b binding protein5 precursor [Zea
           mays] gi|733454|gb|AAA64414.1| chlorophyll a/b-binding
           apoprotein CP26 precursor [Zea mays]
           gi|414591311|tpg|DAA41882.1| TPA: chlorophyll
           a/b-binding apoprotein CP26 Precursor [Zea mays]
          Length = 283

 Score =  271 bits (693), Expect(2) = 6e-84
 Identities = 127/154 (82%), Positives = 134/154 (87%)
 Frame = -2

Query: 778 IDEELAKWYGPERRIYLPDGLLDRSEIPEYLTGEVPGDYGYDPLGLGKKPENFSKYQAFE 599
           I +ELAKWYGP+RRIYLPDGLLDRSE+PEYLTGEVPGDYGYDP GLGKKPE+F+KYQA+E
Sbjct: 58  ISDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYE 117

Query: 598 LIHARWAMLGAAGAVIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKSIPINXXXX 419
           LIHARWAMLGAAGAVIPEA NKFGANCGPEAVWFKTGALLLDGNTL+YFG SIPIN    
Sbjct: 118 LIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNSIPINLVVA 177

Query: 418 XXXXXXXXXXAEYYRITNGLDFEDKLHPGGPFDP 317
                     AEYYRI NGLD EDKLHPGGPFDP
Sbjct: 178 VIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDP 211



 Score = 67.0 bits (162), Expect(2) = 6e-84
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 200 AYVTGEGPIENLSAHLSDPFANNLLTVLQGSVERTPTL 87
           AYVTGEGP+ENL+ HLSDPF NNLLTV+ G+ ERTP+L
Sbjct: 246 AYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283


Top