BLASTX nr result

ID: Aconitum21_contig00000173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000173
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002972199.1| hypothetical protein SELMODRAFT_96367 [Selag...    94   2e-17
ref|XP_001784798.1| predicted protein [Physcomitrella patens sub...    92   3e-17
ref|NP_568900.1| transcription elongation factor B, polypeptide ...    89   5e-16
emb|CBI16050.3| unnamed protein product [Vitis vinifera]               88   9e-16
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...    88   9e-16

>ref|XP_002972199.1| hypothetical protein SELMODRAFT_96367 [Selaginella moellendorffii]
           gi|302791489|ref|XP_002977511.1| hypothetical protein
           SELMODRAFT_106838 [Selaginella moellendorffii]
           gi|300154881|gb|EFJ21515.1| hypothetical protein
           SELMODRAFT_106838 [Selaginella moellendorffii]
           gi|300160498|gb|EFJ27116.1| hypothetical protein
           SELMODRAFT_96367 [Selaginella moellendorffii]
          Length = 99

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/44 (93%), Positives = 44/44 (100%)
 Frame = -2

Query: 523 TPILEKICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 392
           TPILEK+CQYFYWSLQFASGKETEFHIEPE+TLEL+MAANYLHT
Sbjct: 56  TPILEKVCQYFYWSLQFASGKETEFHIEPEMTLELLMAANYLHT 99


>ref|XP_001784798.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162663632|gb|EDQ50386.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 99

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = -2

Query: 523 TPILEKICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 392
           TPILEK+CQYFYWSLQF+SGKETEFHIEPE+TL+LMMAANYLHT
Sbjct: 56  TPILEKVCQYFYWSLQFSSGKETEFHIEPEITLDLMMAANYLHT 99


>ref|NP_568900.1| transcription elongation factor B, polypeptide 1 [Arabidopsis
           thaliana] gi|297790272|ref|XP_002863037.1| SKP1 family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297793455|ref|XP_002864612.1| SKP1 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|9759236|dbj|BAB09760.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028385|gb|AAK76669.1|
           putative elongin protein [Arabidopsis thaliana]
           gi|20465563|gb|AAM20264.1| unknown protein [Arabidopsis
           thaliana] gi|297308839|gb|EFH39296.1| SKP1 family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310447|gb|EFH40871.1| SKP1 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332009765|gb|AED97148.1| transcription elongation
           factor B, polypeptide 1 [Arabidopsis thaliana]
          Length = 96

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = -2

Query: 523 TPILEKICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 392
           T ILEKICQYFYWSLQ++ GKETEFHIEPELTLELMMAANYLHT
Sbjct: 53  TTILEKICQYFYWSLQYSRGKETEFHIEPELTLELMMAANYLHT 96


>emb|CBI16050.3| unnamed protein product [Vitis vinifera]
          Length = 74

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -2

Query: 523 TPILEKICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 392
           T ILEKICQYFYWSLQFASGK+TEF IEPELTLELMMAANYLHT
Sbjct: 31  TTILEKICQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLHT 74


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -2

Query: 523 TPILEKICQYFYWSLQFASGKETEFHIEPELTLELMMAANYLHT 392
           T ILEKICQYFYWSLQFASGK+TEF IEPELTLELMMAANYLHT
Sbjct: 55  TTILEKICQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLHT 98


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