BLASTX nr result

ID: Aconitum21_contig00000131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000131
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...   292   6e-77
ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|2...   291   9e-77
ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medi...   290   2e-76
ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|2...   284   1e-74
ref|XP_003527544.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...   282   6e-74

>ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera]
            gi|296084203|emb|CBI24591.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score =  292 bits (747), Expect = 6e-77
 Identities = 153/249 (61%), Positives = 179/249 (71%), Gaps = 13/249 (5%)
 Frame = +3

Query: 3    REPMAKAKKLSCNHLFHLACLKSWLDQGLSEIYSCPTCRRPLF---SRPETNTRSHPGEV 173
            REPMAKAKKL CNHLFHLACL+SWLDQGL+EIYSCPTCR+PLF   SR + N R+  GEV
Sbjct: 342  REPMAKAKKLHCNHLFHLACLRSWLDQGLTEIYSCPTCRKPLFTGRSRDDANPRT--GEV 399

Query: 174  LNGERLAQQVNVGQERPAIPGQGLPIGTFSDRPQTTSESFPWRGLNLDSSWTNT----GL 341
             + E+LA+Q++ G +RP      LP G F ++     E   WR   LD SW +T    GL
Sbjct: 400  SSDEQLARQISSGLDRPGPAAHALPAGVFPNQTHDALEISAWREAGLDPSWLHTWPNQGL 459

Query: 342  DGAGPSTAIRSAGLGPVQMMMRHLAAVGETYAQTTIDDTAWSLWPVTHPNAVPGSSVPSA 521
            DGAGPSTAIRS GLG VQMMMRHLA+VGETYAQT ++D AWSLWP+ +P+    S +P  
Sbjct: 460  DGAGPSTAIRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPM-NPSQAAASGLPIP 518

Query: 522  AETALRFTGRNGGLRFRNVSAD------NIRSMVDTVREVLPHIPDEIIFQDLQRTNSAT 683
               A+R+ G NGGL  R  S        NI +M +TVREVLPHIPDEIIFQDLQ+TNSAT
Sbjct: 519  PAAAVRYPGGNGGLHMRTASRSANDNLANILAMAETVREVLPHIPDEIIFQDLQQTNSAT 578

Query: 684  VTVNNLLQM 710
            VTVNNLLQM
Sbjct: 579  VTVNNLLQM 587


>ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|222840933|gb|EEE78480.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  291 bits (745), Expect = 9e-77
 Identities = 154/249 (61%), Positives = 179/249 (71%), Gaps = 13/249 (5%)
 Frame = +3

Query: 3    REPMAKAKKLSCNHLFHLACLKSWLDQGLSEIYSCPTCRRPLF-SRPETNTRSHPGEVLN 179
            REPMAKAK+L C+HLFHLACL+SWLDQGL+EIYSCPTCR+PLF  RPE    +H GEVL 
Sbjct: 339  REPMAKAKRLLCSHLFHLACLRSWLDQGLNEIYSCPTCRKPLFLGRPENEANTHTGEVLA 398

Query: 180  GERLAQQVNVGQERPAIPGQGLPIGTFSDRPQTTSESFPWRGLNLDSSW----TNTGLDG 347
             E+LA Q+N G +R   PG+ L  G F  + Q ++ES PWR   LDSSW    +  G DG
Sbjct: 399  DEQLAHQINEGFDRQNTPGRALLDGAFPTQIQNSTESSPWRSAGLDSSWLPNWSGQGADG 458

Query: 348  AGPSTAIRSAGLGPVQMMMRHLAAVGETYAQTTIDDTAWSLWPVTHPNAVP-GSSVPSAA 524
            AGPSTA+RS GLG VQMMMRHLA+VGETYAQT ++D AWSLWP++   A P GSS P AA
Sbjct: 459  AGPSTAMRSVGLGGVQMMMRHLASVGETYAQTALEDAAWSLWPMSPSQATPSGSSTPPAA 518

Query: 525  ETALRFTGRN-GGLRFRNVSAD------NIRSMVDTVREVLPHIPDEIIFQDLQRTNSAT 683
                   GR+ GGL  R  S        NI +M +TVREVLPH+PDE+I QDLQRTNSAT
Sbjct: 519  ------AGRHPGGLHMRTASHSTNDFIANILAMAETVREVLPHVPDELILQDLQRTNSAT 572

Query: 684  VTVNNLLQM 710
            VTVNNLL M
Sbjct: 573  VTVNNLLHM 581


>ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula]
            gi|355487192|gb|AES68395.1| E3 ubiquitin-protein ligase
            synoviolin [Medicago truncatula]
          Length = 589

 Score =  290 bits (742), Expect = 2e-76
 Identities = 146/248 (58%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
 Frame = +3

Query: 3    REPMAKAKKLSCNHLFHLACLKSWLDQGLSEIYSCPTCRRPLFS-RPETNTRSHPGEVLN 179
            REPMAKAKKL+CNHLFHLACL+SWLDQGL+E+Y+CPTCR+PLF+ RPE  T S  G + +
Sbjct: 342  REPMAKAKKLNCNHLFHLACLRSWLDQGLTEMYTCPTCRKPLFAGRPENETNSSTGVISS 401

Query: 180  GERLAQQVNVGQERPAIPGQGLPIGTFSDRPQTTSESFPWRGLNLDS----SWTNTGLDG 347
             E+LA+Q++ G +R       +P G F +     +E  PWR   LDS    SW N G+DG
Sbjct: 402  DEQLARQMSAGFDRQNSARHNMPAGLFPNPTLNNAEGVPWRSAGLDSGWLHSWPNQGVDG 461

Query: 348  AGPSTAIRSAGLGPVQMMMRHLAAVGETYAQTTIDDTAWSLWPVT-HPNAVPGSSVPSAA 524
            AGPSTAIR+ GLG VQMMMRHLA+VGETYAQTT DD +W+LWP+     +  G S P+A 
Sbjct: 462  AGPSTAIRTVGLGRVQMMMRHLASVGETYAQTTFDDASWNLWPINPSQTSASGPSQPTAP 521

Query: 525  ETALRFTGRNGGLRFRNVSAD------NIRSMVDTVREVLPHIPDEIIFQDLQRTNSATV 686
               +R  G NGGL  R  S        N+ +M +TVREVLPHIPD+IIFQDLQRTNS TV
Sbjct: 522  SPGVRLPGGNGGLHIRTASRSANDNLANVLAMAETVREVLPHIPDDIIFQDLQRTNSVTV 581

Query: 687  TVNNLLQM 710
            TVNNLLQM
Sbjct: 582  TVNNLLQM 589


>ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|222871161|gb|EEF08292.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  284 bits (727), Expect = 1e-74
 Identities = 149/247 (60%), Positives = 175/247 (70%), Gaps = 12/247 (4%)
 Frame = +3

Query: 3    REPMAKAKKLSCNHLFHLACLKSWLDQGLSEIYSCPTCRRPLF-SRPETNTRSHPGEVLN 179
            REPMAKAK+L C+H+FHL CL+SWLDQGL+EIYSCPTCR+PLF  RPE    +H GE L 
Sbjct: 326  REPMAKAKRLHCSHIFHLVCLRSWLDQGLNEIYSCPTCRKPLFVDRPENEASTHTGEALT 385

Query: 180  GERLAQQVNVGQERPAIPGQGLPIGTFSDRPQTTSESFPWRGLNLDSSWTNT----GLDG 347
             E+LA Q+N G++R   PG  L  G F ++ + + E  PWR   LDSSW  T    G DG
Sbjct: 386  DEQLAHQINEGRDRQNTPGHVLSAGVFPNQIRNSMEGSPWRSAGLDSSWLPTWPSQGGDG 445

Query: 348  AGPSTAIRSAGLGPVQMMMRHLAAVGETYAQTTIDDTAWSLWPVTHPNAVPGSS-VPSAA 524
            AGPSTA+RS GLG VQMMMRHLA+VGETYAQT ++D AWSLWP    +A P +S +P AA
Sbjct: 446  AGPSTAMRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPTNPSHATPSTSFIPPAA 505

Query: 525  ETALRFTGRNGGL------RFRNVSADNIRSMVDTVREVLPHIPDEIIFQDLQRTNSATV 686
                R  G  GGL      R  N +  NI +M +TVREVLPHIPDE+I QDLQRTNSATV
Sbjct: 506  --GGRRPGGTGGLHVSTTSRTTNDNIANILAMAETVREVLPHIPDELILQDLQRTNSATV 563

Query: 687  TVNNLLQ 707
            TVNNLLQ
Sbjct: 564  TVNNLLQ 570


>ref|XP_003527544.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
          Length = 586

 Score =  282 bits (721), Expect = 6e-74
 Identities = 144/248 (58%), Positives = 176/248 (70%), Gaps = 12/248 (4%)
 Frame = +3

Query: 3    REPMAKAKKLSCNHLFHLACLKSWLDQGLSEIYSCPTCRRPLFSR-PETNTRSHPGEVLN 179
            REPMAKAK+L+CNHLFHLACL+SWLDQGL+E+Y+CPTCR+PLF+  P   T S  G + +
Sbjct: 342  REPMAKAKRLNCNHLFHLACLRSWLDQGLAEMYTCPTCRKPLFAGVPGNETNSDAGTISS 401

Query: 180  GERLAQQVNVGQERPAIPGQGLPIGTFSDRPQTTSESFPWRGLNLDS----SWTNTGLDG 347
             E+LA+Q++ G +RP      +P G + ++   T E  PWRG  LDS    SW N G+DG
Sbjct: 402  DEQLARQISAGLDRPNSARHTMPTGFYPNQTLNTPEGVPWRGAGLDSGWLHSWPNQGVDG 461

Query: 348  AGPSTAIRSAGLGPVQMMMRHLAAVGETYAQTTIDDTAWSLWPVTHPNA-VPGSSVPSAA 524
            AGPSTAIR+ GLG VQMMMRHLA+VGETYAQTT++DTAW+LWP+    A   GS++P   
Sbjct: 462  AGPSTAIRTVGLGRVQMMMRHLASVGETYAQTTLEDTAWNLWPINPSQASASGSTIPPPG 521

Query: 525  ETALRFTGRNGGLRFRNVSAD------NIRSMVDTVREVLPHIPDEIIFQDLQRTNSATV 686
                R   R G L  R  S        NI +M +TVREVLPHIPD++IFQDLQRTNS TV
Sbjct: 522  G---RLPERTGSLHLRTASQSSNDNVANILAMAETVREVLPHIPDDMIFQDLQRTNSVTV 578

Query: 687  TVNNLLQM 710
            TVNNLLQM
Sbjct: 579  TVNNLLQM 586


Top