BLASTX nr result

ID: Aconitum21_contig00000035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00000035
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871512.1| hypothetical protein ARALYDRAFT_909184 [Arab...   111   7e-23
ref|XP_002299649.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002523210.1| elongation factor 1-beta, putative [Ricinus ...   109   3e-22
ref|NP_196772.1| Elongation factor 1-beta 1 [Arabidopsis thalian...   107   1e-21
ref|XP_002314248.1| predicted protein [Populus trichocarpa] gi|1...   105   6e-21

>ref|XP_002871512.1| hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp.
           lyrata] gi|297317349|gb|EFH47771.1| hypothetical protein
           ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata]
          Length = 231

 Score =  111 bits (278), Expect = 7e-23
 Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
 Frame = +1

Query: 118 VTFSDLHTEAGLKSLEQHLAGKSYISGDAISGDDIKVYAAVLSKP--SLPSSGKWYDNVS 291
           VTFSDLHTE GLK+LE+HLAGK+YISGD +S DD+KVYAAVL KP    P++ KWYD+V+
Sbjct: 3   VTFSDLHTEQGLKTLEEHLAGKTYISGDQLSLDDVKVYAAVLEKPGDGFPNASKWYDSVA 62

Query: 292 EALSQSFPGKAAGVRVSS 345
             L++SFPGKA GVRV S
Sbjct: 63  SHLAKSFPGKAVGVRVGS 80


>ref|XP_002299649.1| predicted protein [Populus trichocarpa] gi|222846907|gb|EEE84454.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  109 bits (273), Expect = 3e-22
 Identities = 64/147 (43%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
 Frame = +1

Query: 118 VTFSDLHTEAGLKSLEQHLAGKSYISGDAISGDDIKVYAAVLSKP--SLPSSGKWYDNVS 291
           VTFSD+HTE+GLKSL+++LAGKSYISGD IS DDIKVY AVL  P  +  ++ KWYD+VS
Sbjct: 3   VTFSDIHTESGLKSLDEYLAGKSYISGDQISKDDIKVYGAVLENPGDAFTNASKWYDSVS 62

Query: 292 EALSQSFPGKAAGVRVSSQAGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
             L+ SFPGKA GVRV + A                                        
Sbjct: 63  SQLASSFPGKATGVRVGAAAAAPVEAAPAKEAAGDDDDDDDLDLFGDETEEDKKAAEERE 122

Query: 472 XXXXXXXXXXXXXXXXVLLDVKPWDDE 552
                           VLLDVKPWDDE
Sbjct: 123 KAKKGSSKKKESGKSSVLLDVKPWDDE 149


>ref|XP_002523210.1| elongation factor 1-beta, putative [Ricinus communis]
           gi|223537506|gb|EEF39131.1| elongation factor 1-beta,
           putative [Ricinus communis]
          Length = 226

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
 Frame = +1

Query: 118 VTFSDLHTEAGLKSLEQHLAGKSYISGDAISGDDIKVYAAVLSKP--SLPSSGKWYDNVS 291
           VTFSDLHTE+GLKSL++ LAGKSYISGD ++ DDIKVYAAVL KP  S P++ KWY++VS
Sbjct: 3   VTFSDLHTESGLKSLDEFLAGKSYISGDQLTKDDIKVYAAVLEKPGASFPNASKWYESVS 62

Query: 292 EALSQSFPGKAAGVRVSSQ 348
             L+ SFPGKA GVRV  +
Sbjct: 63  SHLATSFPGKAVGVRVGGK 81


>ref|NP_196772.1| Elongation factor 1-beta 1 [Arabidopsis thaliana]
           gi|84028935|sp|Q84WM9.2|EF1B1_ARATH RecName:
           Full=Elongation factor 1-beta 1; Short=EF-1-beta 1;
           AltName: Full=Elongation factor 1-beta' 1;
           Short=EF-1-beta' 1; AltName: Full=Elongation factor
           1B-alpha 1; AltName: Full=eEF-1B alpha 1
           gi|6686819|emb|CAB64729.1| elongation factor 1B
           alpha-subunit [Arabidopsis thaliana]
           gi|9759378|dbj|BAB10029.1| elongation factor 1B
           alpha-subunit [Arabidopsis thaliana]
           gi|89001045|gb|ABD59112.1| At5g12110 [Arabidopsis
           thaliana] gi|332004381|gb|AED91764.1| Elongation factor
           1-beta 1 [Arabidopsis thaliana]
          Length = 228

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/76 (68%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
 Frame = +1

Query: 118 VTFSDLHTEAGLKSLEQHLAGKSYISGDAISGDDIKVYAAVLSKP--SLPSSGKWYDNVS 291
           VTFSDLHTE GLK+LE+HLAGK+YISGD +S DD+KVYAAVL  P    P++ KWYD+V+
Sbjct: 3   VTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVA 62

Query: 292 EALSQSFPGKAAGVRV 339
             L++SFPGKA GVRV
Sbjct: 63  SHLAKSFPGKADGVRV 78


>ref|XP_002314248.1| predicted protein [Populus trichocarpa] gi|118481035|gb|ABK92471.1|
           unknown [Populus trichocarpa]
           gi|118486898|gb|ABK95283.1| unknown [Populus
           trichocarpa] gi|222850656|gb|EEE88203.1| predicted
           protein [Populus trichocarpa]
          Length = 225

 Score =  105 bits (261), Expect = 6e-21
 Identities = 61/147 (41%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
 Frame = +1

Query: 118 VTFSDLHTEAGLKSLEQHLAGKSYISGDAISGDDIKVYAAVLSKP--SLPSSGKWYDNVS 291
           VTFSDLHTE+GLKSL + L GKSYISGD IS DDIKVY AVL KP    P++ KWY++VS
Sbjct: 3   VTFSDLHTESGLKSLNEFLVGKSYISGDQISKDDIKVYGAVLEKPGRDFPNASKWYESVS 62

Query: 292 EALSQSFPGKAAGVRVSSQAGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 471
             L+ SFPGKA GV +  +                                         
Sbjct: 63  SQLALSFPGKAVGVSICGKTAAAAPVEAAPAKEAAGDDDDDLDLFGDETEEDKKAAEERE 122

Query: 472 XXXXXXXXXXXXXXXXVLLDVKPWDDE 552
                           VL+DVKPWDDE
Sbjct: 123 KAKKASSKKKESGKSSVLMDVKPWDDE 149


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