BLASTX nr result

ID: Achyranthes23_contig00056410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00056410
         (256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006417471.1| hypothetical protein EUTSA_v10006652mg [Eutr...    57   3e-06
ref|XP_006840418.1| hypothetical protein AMTR_s00045p00157300, p...    55   7e-06
ref|XP_006306623.1| hypothetical protein CARUB_v10008140mg [Caps...    55   7e-06
ref|XP_002446695.1| hypothetical protein SORBIDRAFT_06g020700 [S...    55   1e-05

>ref|XP_006417471.1| hypothetical protein EUTSA_v10006652mg [Eutrema salsugineum]
           gi|557095242|gb|ESQ35824.1| hypothetical protein
           EUTSA_v10006652mg [Eutrema salsugineum]
          Length = 1042

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/72 (45%), Positives = 39/72 (54%)
 Frame = -3

Query: 254 TTSPLFGVATTLSSTNGFGISPEPSFGVWTTPGFQESKTPAFGVTPPSSTSCFGWRPPSS 75
           ++SP FG     S T  FG S  P+FG  +TP F  S TPAFG    SST  FG     +
Sbjct: 231 SSSPAFGA----SGTPAFGASGAPAFGASSTPAFGASSTPAFGA---SSTPAFGASSTPT 283

Query: 74  FGLATTSEFDFG 39
           FG + TS F FG
Sbjct: 284 FGASNTSSFSFG 295


>ref|XP_006840418.1| hypothetical protein AMTR_s00045p00157300, partial [Amborella
           trichopoda] gi|548842136|gb|ERN02093.1| hypothetical
           protein AMTR_s00045p00157300, partial [Amborella
           trichopoda]
          Length = 1086

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
 Frame = -3

Query: 254 TTSPLFGVATT----LSSTNGFGISPEPSFGVWTTPGFQESKTPAFG----------VTP 117
           TT+P FG  TT     SST  FG+S  P+FG  + P F  S TP FG           TP
Sbjct: 194 TTTPAFGSTTTPAFGASSTPAFGVSSSPAFGASSAPAFGASSTPVFGGSSIPAFGTSSTP 253

Query: 116 ---PSSTSCFGWRPPSSFGLATTSEFDFG 39
               SST  FG     +FG ++T  F FG
Sbjct: 254 AFGASSTPAFGASSTPAFGASSTPSFGFG 282


>ref|XP_006306623.1| hypothetical protein CARUB_v10008140mg [Capsella rubella]
           gi|482575334|gb|EOA39521.1| hypothetical protein
           CARUB_v10008140mg [Capsella rubella]
          Length = 1123

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/71 (49%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
 Frame = -3

Query: 236 GVATTLSSTNGFGISPEPSFGVWTTPGFQESKTPAFGV--TP---PSSTSCFGWRPPSSF 72
           G A   SST  FG S  P+FG   TP F  S TPAFG   TP    SST  FG     SF
Sbjct: 309 GGAFGASSTPAFGASSTPAFGASGTPAFGASSTPAFGTSSTPAFGASSTPAFGASSTPSF 368

Query: 71  GLATTSEFDFG 39
           G + TS F FG
Sbjct: 369 GASNTSSFSFG 379



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/74 (45%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = -3

Query: 239 FGVATTLSSTN--GFGISPEPSFGVWTTPGFQESKTPAFGVTPPSSTSCFGWRPPSSFGL 66
           FG +T   +TN   FG S  PSFG  +TP F  S TPAFG T   +T  FG    SSFG+
Sbjct: 224 FGSSTPFGATNTPAFGASSTPSFGATSTPSFGASSTPAFGAT---NTPAFGASNSSSFGV 280

Query: 65  ATTSEFDFGGCGPT 24
             T  F   G  PT
Sbjct: 281 TNTPAF---GASPT 291


>ref|XP_002446695.1| hypothetical protein SORBIDRAFT_06g020700 [Sorghum bicolor]
           gi|241937878|gb|EES11023.1| hypothetical protein
           SORBIDRAFT_06g020700 [Sorghum bicolor]
          Length = 943

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = -3

Query: 251 TSPLFGVATT-LSSTNGFGISPEPSFGVWTTPGFQESKTPAFGVTPP----SSTSCFGWR 87
           T P FG +T   S+T  FG +  P+FG  TTP F  + TPAFG T P    ++T  FG  
Sbjct: 159 TQPTFGSSTFGASTTPAFGTTTTPTFGTTTTPAFGTTTTPAFGTTTPAFGTTTTPAFGAT 218

Query: 86  PPSSFGLATTSEF 48
              +FG A+TS F
Sbjct: 219 TTPAFGSASTSLF 231


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