BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00055384
         (286 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...    77   3e-12
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...    74   2e-11
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ...    74   2e-11
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...    74   2e-11
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...    74   2e-11
emb|CBI28010.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...    73   3e-11
ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polyme...    72   8e-11
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...    72   8e-11
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme...    71   1e-10
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...    70   2e-10
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...    70   2e-10
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...    70   3e-10
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...    70   3e-10
ref|XP_004975068.1| PREDICTED: probable RNA-dependent RNA polyme...    69   5e-10
ref|XP_004975067.1| PREDICTED: probable RNA-dependent RNA polyme...    69   5e-10
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...    69   8e-10
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ...    68   1e-09
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...    67   2e-09
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...    67   3e-09

>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
           gi|482565615|gb|EOA29804.1| hypothetical protein
           CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
 Frame = -2

Query: 279 KDGKTSSMKCYFVHIDTFSQSYDIEK-------CPREARSCFMHLDTLTSMSKYAARLQL 121
           KD  T   KCYF+  D+ + S D+EK          EAR  FMH+ TL S++ Y AR  L
Sbjct: 305 KDVSTKRAKCYFIRTDS-TASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSL 363

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKT  L +DL    +N E+I DIPC   DG  V+D+NK
Sbjct: 364 ILSKTKKLEVDL--TGVNFEIIKDIPCHDQDGKDVLDKNK 401


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
 Frame = -2

Query: 270 KTSSMKCYFVHIDTFSQSYDIE------KCPREARSCFMHLDTLTSMSKYAARLQLVLSK 109
           KT+S+KCYFV  ++     D E      K   +AR  FMH+  +++M+KYAARL L+LSK
Sbjct: 320 KTASLKCYFVRFESIGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSK 379

Query: 108 TITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           TI L  DLD+  + +E I DI C+  +G ++ DE+
Sbjct: 380 TIKLQTDLDS--VTIERIEDILCRDENGCIIQDED 412


>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
           vulgaris]
          Length = 689

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTF-----SQSYDIE-KCPREARSCFMHLDTLTSMSKYAARLQL 121
           +KD  +SS+KCYFV + +      S +Y +  K   EAR  FMH   L S+ KY AR  L
Sbjct: 272 KKDPTSSSVKCYFVRMQSCWSIDGSANYILSNKTVSEARGLFMHAHLLPSLDKYMARFSL 331

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKT  L IDL T  +NV+ I D+ CQ  +G+++ D  K
Sbjct: 332 ILSKTFKLNIDLAT--VNVQTIQDVYCQDENGNIIYDNEK 369


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE-----KCPREARSCFMHLDTLTSMSKYAARLQLV 118
           +KD  TS +KC+FV +++ +   + +     K  R+ARS FMH+D L+S+S Y AR  L+
Sbjct: 182 KKDPTTSPVKCFFVRMESVASIDNQDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLI 241

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVV 16
           LSKT+ L +DL   DI  + I D PC+  DG+VV
Sbjct: 242 LSKTMNLEVDLSCVDI--KTIADEPCRDKDGNVV 273


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE-----KCPREARSCFMHLDTLTSMSKYAARLQLV 118
           +KD  TS +KC+FV +++ +   + +     K  R+ARS FMH+D L+S+S Y AR  L+
Sbjct: 204 KKDPTTSPVKCFFVRMESVASIDNQDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLI 263

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVV 16
           LSKT+ L +DL   DI  + I D PC+  DG+VV
Sbjct: 264 LSKTMNLEVDLSCVDI--KTIADEPCRDKDGNVV 295


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIEKCPREARSCFMHLDTLTSMSKYAARLQLVLSKTI 103
           +K   TSS+KCYFV +++ + S    K   EAR  FMH   ++S++KY AR  L+LSKT+
Sbjct: 263 KKKNPTSSVKCYFVFMESSALS---GKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTV 319

Query: 102 TLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
            L +DL T  +N++ I D P +  DG VV DE+
Sbjct: 320 KLDVDLST--VNIQRIDDEPGRDEDGHVVYDED 350


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIEKCPREARSCFMHLDTLTSMSKYAARLQLVLSKTI 103
           +K   TSS+KCYFV +++ + S    K   EAR  FMH   ++S++KY AR  L+LSKT+
Sbjct: 271 KKKNPTSSVKCYFVFMESSALS---GKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTV 327

Query: 102 TLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
            L +DL T  +N++ I D P +  DG VV DE+
Sbjct: 328 KLDVDLST--VNIQRIDDEPGRDEDGHVVYDED 358


>ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Cucumis
           sativus]
          Length = 560

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE------KCPREARSCFMHLDTLTSMSKYAARLQL 121
           +K+  TS++KCYFV +++ +    IE      +   EARS FMH   ++S++ Y AR  L
Sbjct: 379 KKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSL 438

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKTI L IDL T  +NV+ I DIPC+   G+V+  + K
Sbjct: 439 ILSKTINLKIDLST--VNVQRIGDIPCKDIYGNVIYRDGK 476


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 6/100 (6%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE------KCPREARSCFMHLDTLTSMSKYAARLQL 121
           +K+  TS++KCYFV +++ +    IE      +   EARS FMH   ++S++ Y AR  L
Sbjct: 354 KKNPTTSAVKCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSL 413

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKTI L IDL T  +NV+ I DIPC+   G+V+  + K
Sbjct: 414 ILSKTINLKIDLST--VNVQRIGDIPCKDIYGNVIYRDGK 451


>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 759

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFS----QSYDI-EKCPREARSCFMHLDTLTSMSKYAARLQLV 118
           +K+ K  S+KCYFV +++ +    ++Y + +K   EAR  FMH+  ++SM+KY AR  L+
Sbjct: 342 DKEEKIDSVKCYFVRMESLNPYENETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLI 401

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           LS T+ L +DL++  +N++ I DI C    G ++ DE+
Sbjct: 402 LSTTVKLQVDLNS--VNIDRIEDIYCHDKSGRIIYDED 437


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843311|ref|XP_006475557.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
           sinensis] gi|557554498|gb|ESR64512.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDT-----FSQSYDIE-KCPREARSCFMHLDTLTSMSKYAARLQL 121
           +KD  TS +KCYFV +++         Y +  K   EAR  FMH+ T++S++ Y +RL L
Sbjct: 311 KKDPSTSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSL 370

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKT+ L +D     IN+E I D PC+  DG+VV  + +
Sbjct: 371 ILSKTMKLEVDFSR--INIERIEDEPCRDKDGNVVYKDGE 408


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843309|ref|XP_006475556.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
           sinensis] gi|557554497|gb|ESR64511.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDT-----FSQSYDIE-KCPREARSCFMHLDTLTSMSKYAARLQL 121
           +KD  TS +KCYFV +++         Y +  K   EAR  FMH+ T++S++ Y +RL L
Sbjct: 313 KKDPSTSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSL 372

Query: 120 VLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           +LSKT+ L +D     IN+E I D PC+  DG+VV  + +
Sbjct: 373 ILSKTMKLEVDFSR--INIERIEDEPCRDKDGNVVYKDGE 410


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 1110

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/98 (37%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFS----QSYDI-EKCPREARSCFMHLDTLTSMSKYAARLQLV 118
           +K+ K  S+KCYFV +++ +    ++Y + +K   EAR  FMH+  ++SM+KY AR  L 
Sbjct: 398 DKEEKIDSVKCYFVRMESLNPYEKETYILRDKMVHEARCNFMHVHMVSSMAKYMARFSLT 457

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           LS T+ L +DL++  +N++ I DI C    G ++ DE+
Sbjct: 458 LSTTVKLQVDLNS--VNIDRIEDICCHDKSGRIIYDED 493


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE-----KCPREARSCFMHLDTLTSMSKYAARLQLV 118
           +KD  TS +KC+FV +++ +   + +     K  R+ARS FMH+D L+S+S Y AR  L+
Sbjct: 182 KKDPTTSPVKCFFVCMESVASVDNQDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLI 241

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVV 16
           LSKT+ L +DL   DI  + I D PC+  DG+ V
Sbjct: 242 LSKTMNLEVDLSFVDI--KPIADEPCRDKDGNAV 273


>ref|XP_004975068.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like isoform X2
           [Setaria italica]
          Length = 1145

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = -2

Query: 285 GEKDGKTSSMKCYFVHIDTFSQSYDIE-KCPREARSCFMHLDTLTSMSKYAARLQLVLSK 109
           GE    TSS++CYFV  ++  ++Y +  K   + R  FM + T  ++  Y  R  L+LSK
Sbjct: 469 GEIKKCTSSVRCYFVCTESVDETYILSNKTVGQCRKLFMDIHTAPTLPNYMKRFSLILSK 528

Query: 108 TITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           T+TL +DL T  +NV +I D PC+   G VV+++ K
Sbjct: 529 TVTLEVDLST--VNVILIDDEPCRNEHGKVVIEDGK 562


>ref|XP_004975067.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like isoform X1
           [Setaria italica]
          Length = 1150

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = -2

Query: 285 GEKDGKTSSMKCYFVHIDTFSQSYDIE-KCPREARSCFMHLDTLTSMSKYAARLQLVLSK 109
           GE    TSS++CYFV  ++  ++Y +  K   + R  FM + T  ++  Y  R  L+LSK
Sbjct: 469 GEIKKCTSSVRCYFVCTESVDETYILSNKTVGQCRKLFMDIHTAPTLPNYMKRFSLILSK 528

Query: 108 TITLPIDLDTEDINVEVIHDIPCQYADGSVVVDENK 1
           T+TL +DL T  +NV +I D PC+   G VV+++ K
Sbjct: 529 TVTLEVDLST--VNVILIDDEPCRNEHGKVVIEDGK 562


>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
 Frame = -2

Query: 270 KTSSMKCYFVHIDTFSQSYD------IEKCPREARSCFMHLDTLTSMSKYAARLQLVLSK 109
           KT+S+KCYFV  ++     D        K   +AR  FMH+  +++M+KYAARL L+LSK
Sbjct: 320 KTASLKCYFVRFESIETCNDGGSYVFSTKRISQARCQFMHVHMVSNMAKYAARLSLILSK 379

Query: 108 TITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           TI L ++L    + +E I DI C+  +G ++ DE+
Sbjct: 380 TIKLQVNL--ASVTIERIEDILCRDENGCIIKDED 412


>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 934

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE-------KCPREARSCFMHLDTLTSMSKYAARLQ 124
           +KD  T  +KCYF+  D+ + S D+        K   EAR  FMH++TL+S+  Y AR  
Sbjct: 325 KKDAATKGVKCYFIRTDS-TASNDMRNPYIFSGKSMHEARMHFMHVNTLSSLPNYMARFS 383

Query: 123 LVLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           L+LSKT TL +D+    I  E I DI C   D   V+D+N
Sbjct: 384 LILSKTKTLEVDM--TGITFEQIDDIHCHDQDNKDVLDKN 421


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
           gi|548857326|gb|ERN15132.1| hypothetical protein
           AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
 Frame = -2

Query: 279 KDGKTSSMKCYFVHIDTFSQS-----YDIE-KCPREARSCFMHLDTLTSMSKYAARLQLV 118
           K+  T+ +KCYFV + + ++S     Y +  K  +EARS FM + T+ +++KY AR  L+
Sbjct: 291 KNANTTGVKCYFVCMKSDAESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLI 350

Query: 117 LSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           LSKTI L +DL +  +N+E I+D PC      +V D+N
Sbjct: 351 LSKTIKLEVDLGS--VNIERINDKPCLDNHNEIVYDQN 386


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
 Frame = -2

Query: 282 EKDGKTSSMKCYFVHIDTFSQSYDIE-------KCPREARSCFMHLDTLTSMSKYAARLQ 124
           +KD  T  +KCYF+  D+ + S D++       K   EAR  FMH++TL+S+  Y +R  
Sbjct: 300 KKDVSTKGVKCYFIRTDS-TASIDMQNPYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFS 358

Query: 123 LVLSKTITLPIDLDTEDINVEVIHDIPCQYADGSVVVDEN 4
           L+LSKT TL +D+    I  E I DI C   D   V+D+N
Sbjct: 359 LILSKTKTLEVDM--TGITFEQIDDIHCHDQDDKDVLDKN 396