BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00055259
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_569141.1| polyprotein [Tobacco vein clearing virus] gi|64...   107   2e-21
ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]...   100   2e-19
emb|CAB42622.1| putative polyprotein (aspartic proteinase, rever...   100   3e-19
ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-li...    94   1e-17
ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus] ...    79   5e-13
ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassav...    78   1e-12
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]...    72   6e-11
emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]               70   3e-10
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...    70   4e-10
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                       69   5e-10
gb|ABW80581.1| polyprotein [Dahlia mosaic virus]                       69   7e-10
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                   69   9e-10
emb|CAH68829.1| polyprotein [Carnation etched ring virus]              68   1e-09
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]             68   1e-09
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]          67   2e-09
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...    67   3e-09
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]             66   6e-09
ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote...    66   6e-09
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                       65   7e-09
ref|YP_001931961.1| replicase [Lamium leaf distortion virus] gi|...    65   9e-09

>ref|NP_569141.1| polyprotein [Tobacco vein clearing virus]
           gi|6425075|gb|AAF08289.1|AF190123_3 polyprotein [Tobacco
           vein clearing virus]
          Length = 635

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/107 (49%), Positives = 72/107 (67%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPN 184
           SF G +NQ+RE+IP+L+  LKPLQKKLKKD++++  E+D                LY+P+
Sbjct: 440 SFLGIVNQVREYIPKLAENLKPLQKKLKKDVEYSFDEKDKEQIKKIKILCKKLPKLYFPD 499

Query: 185 VNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEE 325
            NKKF +IVETD+S  SY GVLK+RY  EK E  CRY SG++ + +E
Sbjct: 500 ENKKFTYIVETDSSNYSYGGVLKYRYNKEKIEHHCRYYSGSYTEPQE 546


>ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]
           gi|325698381|gb|ADZ45064.1| replicase [Sweet potato vein
           clearing virus]
          Length = 619

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPN 184
           SF G INQ+RE++P ++  L  LQKKLKKD+++    +D                L +P+
Sbjct: 425 SFLGLINQVREYVPNIAKELLFLQKKLKKDVEYHFDSQDQEKLKKIKEKCSNLPKLLFPD 484

Query: 185 VNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
             K+F WIVETDAS+ SY GVLK++Y+ +K E  CRY SGTFK NE+N
Sbjct: 485 ETKQFDWIVETDASEISYGGVLKYKYHQDKIEYHCRYYSGTFKDNEKN 532


>emb|CAB42622.1| putative polyprotein (aspartic proteinase, reverse transcriptase,
           ribonuclease H) [Nicotiana tabacum]
          Length = 636

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/102 (49%), Positives = 67/102 (65%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPN 184
           SF G +NQ+RE+IP+L+  LKPLQKKLKKDI++   E+D                LY+P+
Sbjct: 440 SFLGLVNQVREYIPKLAENLKPLQKKLKKDIEYHFDEKDKIHIQKIKNMCKKLPKLYFPD 499

Query: 185 VNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTF 310
             K+F +IVETD+S  SY GVLK++Y  EK E  CRY SG++
Sbjct: 500 EKKQFTYIVETDSSDHSYGGVLKYKYDNEKIEHHCRYYSGSY 541


>ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-like [Solanum
           lycopersicum]
          Length = 428

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/102 (46%), Positives = 65/102 (63%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPN 184
           SF G +NQ+RE+IP+L+  LKPL KKLKKDI++    +D                LY+P+
Sbjct: 233 SFLGLVNQVREYIPKLAEHLKPLYKKLKKDIEYHFDNKDKEHIKNIKKLCKKLPKLYFPD 292

Query: 185 VNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTF 310
            N+ F +I+ETD+S  SY GVLK++Y  EK E  CRY SG++
Sbjct: 293 ENRTFTYIIETDSSDHSYGGVLKYKYDKEKVEHHCRYCSGSY 334


>ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus]
           gi|327415369|gb|ADR03142.2| replicase [Sweet potato
           caulimo-like virus]
          Length = 641

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLK----KDIQWT*MEEDXXXXXXXXXXXXXXXXL 172
           S  G +NQ+R F+P LS  L P+QKKLK    +  +WT  E++                +
Sbjct: 439 SILGLVNQIRNFLPNLSKILLPIQKKLKIKNEEVWEWT-KEDEQNIIKLKDYCKDNVIKM 497

Query: 173 YYPNVNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            YP   K   WI+E DASKE Y   LK  Y  +K E  CRYNSGTFK++E+N
Sbjct: 498 TYPVEEKDMNWIIEVDASKEYYGNCLK--YKKDKIEYICRYNSGTFKEHEKN 547


>ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassava vein mosaic virus]
           gi|81945490|sp|Q89703.1|POL_CSVMV RecName: Full=Putative
           enzymatic polyprotein; Includes: RecName: Full=Protease;
           Short=PR; Includes: RecName: Full=Reverse transcriptase;
           Short=RT; Includes: RecName: Full=Ribonuclease H
           gi|665934|gb|AAA79873.1| ORF III [Cassava vein mosaic
           virus] gi|1399884|gb|AAB03327.1| ORF 3 [Cassava vein
           mosaic virus]
          Length = 652

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLK-KDIQ-WT*MEEDXXXXXXXXXXXXXXXX-LY 175
           S  G +NQ+R FIP L+  L P+QKKLK KD + WT  +ED                 + 
Sbjct: 443 SILGLLNQIRHFIPHLAQILLPIQKKLKIKDEEIWTWTKEDEEKIKLIQDYSKNLVIKMK 502

Query: 176 YPNVNKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEE 325
           YP   +   WI+E DAS  +Y   LK++    K E  CRYNSGTFK+NE+
Sbjct: 503 YPINKEDMNWIIEVDASNNAYGSCLKYKPKNSKIEYLCRYNSGTFKENEQ 552


>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
           gi|401620160|gb|AFP95350.1| reverse transcriptase
           [Soybean Putnam virus]
          Length = 699

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/107 (37%), Positives = 53/107 (49%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +    ++IP+L+   KPLQ KLKKD+ WT   +D                LY+P +
Sbjct: 508 FLGILTYASDYIPKLAEIRKPLQSKLKKDVPWTWTHDDINYMSKIKKNLKSFPTLYHPKL 567

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
                 I+ETDAS   + G+LK R      E  CRY SG+FK  E N
Sbjct: 568 TDTL--IIETDASGSFWGGILKARTENSDSELICRYTSGSFKAAELN 612


>emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]
          Length = 517

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/74 (47%), Positives = 48/74 (64%)
 Frame = +2

Query: 5   SFSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPN 184
           SF G +NQ+RE+IP+L+  LKPLQKKLKKDI++   E+D                LY+P+
Sbjct: 440 SFLGLVNQVREYIPKLAENLKPLQKKLKKDIEYHFDEKDKIHIQKIKNMCKKLPKLYFPD 499

Query: 185 VNKKFIWIVETDAS 226
             K+F +IVETD+S
Sbjct: 500 EKKQFTYIVETDSS 513


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
           gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
           unnamed protein product [Carnation etched ring virus]
           gi|225356|prf||1301227E ORF 5
          Length = 659

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/107 (37%), Positives = 56/107 (52%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +    ++IP+L++  KPLQ KLK+D  WT  + D                LY+P  
Sbjct: 467 FLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLKSFPKLYHPEP 526

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
           N K   ++ETDAS+E + G+LK  +     E  CRY SG+FK  E N
Sbjct: 527 NDKL--VIETDASEEFWGGILKAIH--NSHEYICRYASGSFKAAERN 569


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 42/107 (39%), Positives = 56/107 (52%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   KPLQ KLKKD  W   + D                LY P  
Sbjct: 619 FLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKKNLISFPKLYLPK- 677

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            K+F+ I+ETDAS + + GVLK +     KE+ CRY SG+FK  E+N
Sbjct: 678 EKEFL-IIETDASNDFWGGVLKAK--TADKEEVCRYTSGSFKTAEKN 721


>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
          Length = 812

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/107 (39%), Positives = 55/107 (51%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   KPLQ KLKKD  W   + D                LY P  
Sbjct: 623 FLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLPK- 681

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            K+F+ I+ETDAS + + GVLK +     KE+ CRY SG+FK  E N
Sbjct: 682 EKEFL-IIETDASNDFWGGVLKAK--TADKEEVCRYTSGSFKTAERN 725


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 41/107 (38%), Positives = 57/107 (53%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   +PLQ KLKKD  W   + D                LY P  
Sbjct: 621 FLGILTYAESYIPKLAELRRPLQVKLKKDYVWEWKQSDTSYIKKIKKNLTSFPKLYLPK- 679

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            K+F+ I+ETDAS + + GVLK +    +KE+ CRY SG+FK  E+N
Sbjct: 680 EKEFL-IIETDASNDYWGGVLKAK--TAEKEEVCRYTSGSFKTAEKN 723


>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
          Length = 656

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/105 (37%), Positives = 55/105 (52%)
 Frame = +2

Query: 14  GTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNVNK 193
           G +    ++IP+L++  KPLQ KLK+D  WT  + D                LY+P  N 
Sbjct: 466 GILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLKSFPKLYHPEPND 525

Query: 194 KFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
           K   ++ETDAS+E + G+LK  +     E  CRY SG+FK  E N
Sbjct: 526 KL--VIETDASEEFWGGILKAIH--NSHEYICRYASGSFKAAERN 566


>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 814

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 41/107 (38%), Positives = 56/107 (52%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   KPLQ KLKKD  W   + D                LY P  
Sbjct: 625 FLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLPK- 683

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            ++F+ I+ETDAS + + GVLK +     KE+ CRY SG+FK  E+N
Sbjct: 684 EEEFL-IIETDASNDFWGGVLKAK--TADKEEVCRYTSGSFKTAEKN 727


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/107 (38%), Positives = 56/107 (52%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +N +  + P+++N   PLQ KLKK+I W+  E+D                LY P+ 
Sbjct: 507 FLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRKIKSLVKSLPDLYNPSP 566

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
             K   I+E DAS + +  VLK +   E KE  CRY SGTFK  E+N
Sbjct: 567 EDK--PIIECDASDDHWGAVLKAK-LPEGKEVICRYASGTFKPAEKN 610


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
           banding virus]
          Length = 708

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/107 (37%), Positives = 56/107 (52%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +N +  + P+++N   PLQ KLKK+I W+  E+D                LY P+ 
Sbjct: 516 FLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRKIKSLVKTLPDLYNPSP 575

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
             K   I+E DAS + +  +LK +   E KE  CRY SGTFK  E+N
Sbjct: 576 EDK--PIIECDASDDHWGAILKAK-LPEGKEVICRYASGTFKPAEKN 619


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/107 (36%), Positives = 54/107 (50%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   +PLQ KLKKD  W   + D                LY P  
Sbjct: 632 FLGVLTYAESYIPKLAELRRPLQVKLKKDFVWEWKQSDTNYVKKIKKNLTSFPKLYLP-- 689

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
           NK+   I+ET AS E + GVLK +    + E+ C+Y SG+FK  E+N
Sbjct: 690 NKEDFLIIETGASNEFWGGVLKVK--TAETEEICKYTSGSFKTAEKN 734


>ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Figwort mosaic virus]
           gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58813|emb|CAA29527.1|
           unnamed protein product [Figwort mosaic virus]
          Length = 666

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 40/107 (37%), Positives = 53/107 (49%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   KPLQ KLKKD+ W   + D                LY P  
Sbjct: 476 FLGVLTYAETYIPKLAEIRKPLQVKLKKDVTWNWTQSDSDYVKKIKKNLGSFPKLYLPKP 535

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
                 I+ETDAS   + GVLK R   +  E  CRY+SG+FK+ E+N
Sbjct: 536 EDHL--IIETDASDSFWGGVLKARAL-DGVELICRYSSGSFKQAEKN 579


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/107 (37%), Positives = 53/107 (49%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +     +IP+L+   +PLQ KLKKD  W   + D                LY P  
Sbjct: 617 FLGVLTYAESYIPKLAELRRPLQVKLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLP-- 674

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
            +K   I+ETDAS + + GVLK +     KE  CRY SG+FK  E+N
Sbjct: 675 KEKEFPIIETDASNDFWGGVLKAK--TADKEAVCRYTSGSFKTAEKN 719


>ref|YP_001931961.1| replicase [Lamium leaf distortion virus]
           gi|172041757|gb|ACB69767.1| replicase [Lamium leaf
           distortion virus]
          Length = 696

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/107 (34%), Positives = 57/107 (53%)
 Frame = +2

Query: 8   FSGTINQLREFIPELSNTLKPLQKKLKKDIQWT*MEEDXXXXXXXXXXXXXXXXLYYPNV 187
           F G +    ++IP+L++   PLQ+KLK+D+ W     D                L++P  
Sbjct: 501 FLGILTYASDYIPQLASMRAPLQEKLKEDVPWNWKHSDTEYVEEIKKSLTDFPKLHHPAT 560

Query: 188 NKKFIWIVETDASKESYVGVLKFRYYGEKKEQACRYNSGTFKKNEEN 328
           ++K   I+E DAS + + G+LK  +  E  E+ CRY SG+FKK E N
Sbjct: 561 DEKL--IIECDASGKYWGGILKAIHQSE--ERICRYTSGSFKKAELN 603