BLASTX nr result
ID: Achyranthes23_contig00055236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00055236
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261... 92 1e-34
ref|XP_004231642.1| PREDICTED: uncharacterized protein LOC101267... 75 3e-27
ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578... 119 1e-24
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] 84 1e-24
gb|ABA99152.1| retrotransposon protein, putative, unclassified [... 68 2e-24
ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group] g... 76 2e-24
ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515... 115 1e-23
ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669... 114 3e-23
ref|XP_006584420.1| PREDICTED: uncharacterized protein LOC102664... 114 3e-23
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777... 87 3e-23
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi... 72 2e-22
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 75 1e-21
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 71 3e-20
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 69 4e-20
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group] 69 4e-20
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group... 67 4e-20
ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670... 103 6e-20
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 66 2e-18
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 69 7e-18
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 69 7e-18
>ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261089 [Solanum
lycopersicum]
Length = 1140
Score = 92.0 bits (227), Expect(2) = 1e-34
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Frame = +1
Query: 4 PWTFSPWASWPTPPCPIPTQ----HRTPQQRPSIHPQQGLLGPRP-QAHLTDA------- 147
PW + W TPPCP P Q + RP P +G+LG RP QA+ + A
Sbjct: 266 PWPYWGNGPWATPPCPYPAQGPGLNPWTGARPYQPPSRGILGSRPNQAYFSSAPSSYPGY 325
Query: 148 TPTNIQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQN--VIVGNGQGI 321
PTNI++A++T++L P+ +Y DTGATSHMT++ G LS FNLS N + VGNG I
Sbjct: 326 VPTNIEQAMHTMSLTDPN--YYMDTGATSHMTNSQGNLSPYFNLSNHVNNAITVGNGSKI 383
Query: 322 SIRG 333
I+G
Sbjct: 384 PIKG 387
Score = 81.3 bits (199), Expect(2) = 1e-34
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 371 LVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLMRCNNKGD 538
L L +V++ P +IKNLISVRKFT DN VS EFDPFG SVKDL+TG+ ++RCN+ GD
Sbjct: 398 LQLKNVLHVPKIIKNLISVRKFTTDNHVSVEFDPFGFSVKDLQTGSKIVRCNSSGD 453
>ref|XP_004231642.1| PREDICTED: uncharacterized protein LOC101267661 [Solanum
lycopersicum]
Length = 693
Score = 75.5 bits (184), Expect(2) = 3e-27
Identities = 53/118 (44%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Frame = +1
Query: 19 PWA-SWPTPPCPIPTQHRTPQQRPSIHPQQG-LLGPRP---QAHLTDA--------TPTN 159
PW WP PPCP PT+ T RP QQ LL PRP QA++ TPT+
Sbjct: 197 PWVYGWPIPPCPHPTRGWT---RPGTPNQQAILLCPRPRNQQAYMVSGQQQQSGSMTPTD 253
Query: 160 IQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLST--PQNVIVGNGQGISI 327
IQ A++T++ DTGATSHMTS+SG FNLST N++VGNG I I
Sbjct: 254 IQAAMHTMS----------DTGATSHMTSSSGKFLYYFNLSTHPNNNIVVGNGHKIPI 301
Score = 72.8 bits (177), Expect(2) = 3e-27
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +2
Query: 338 GSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLM 517
G T L S +P L L +V +AP +IKNLISVRKFT+DN V+ FDPFG S+KD +TG +
Sbjct: 305 GHTCLPSYNPTLSLYNVFHAPKIIKNLISVRKFTIDNSVTVAFDPFGFSIKDFQTGKQIT 364
Query: 518 RCNN 529
R +N
Sbjct: 365 RNSN 368
>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
Length = 614
Score = 119 bits (297), Expect = 1e-24
Identities = 65/144 (45%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +1
Query: 4 PWTFSPWASWPTPPCPIPTQH-RTPQQRPSIHPQQGLLGPRPQ-AHLTDATPTNIQEALN 177
PW +PWA W PPCP P+ P P +LG RPQ A+ T TPT+I+ A++
Sbjct: 311 PW-MAPWAPWAIPPCPYPSNSWAKPNYGQQQKPHPHILGTRPQQAYTTAPTPTDIEVAMH 369
Query: 178 TLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQGISIRGNWLHKINL 357
TL + PPD WY DTGATSHMTS G L+S FN+S ++VGNGQ I I G K++
Sbjct: 370 TLGITPPDANWYMDTGATSHMTSAQGNLTSYFNISNKCGIMVGNGQPIPIHGYGHTKLSF 429
Query: 358 PTPPSCLKSCHLCT*PHQKPNFCS 429
P PP L+ ++ PH N S
Sbjct: 430 PCPP--LQLNNVLHAPHLVKNLVS 451
Score = 93.2 bits (230), Expect(2) = 2e-18
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +2
Query: 332 GIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTL 511
G G TKL+ P PPL LN+V++AP+L+KNL+S+RKFT DN VS EFDPFG VKD +TG
Sbjct: 421 GYGHTKLSFPCPPLQLNNVLHAPHLVKNLVSIRKFTTDNSVSVEFDPFGFPVKDFQTGRP 480
Query: 512 LMRCNNKG 535
+MRC ++G
Sbjct: 481 VMRCESRG 488
Score = 25.8 bits (55), Expect(2) = 2e-18
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 594 SPTLWHDRLRHFG 632
+P+LWHDRL H G
Sbjct: 507 APSLWHDRLGHPG 519
>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
Length = 826
Score = 84.3 bits (207), Expect(3) = 1e-24
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = +2
Query: 335 IGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLL 514
IGS + PH LVLN V+ +P++IKNLIS+R+FT DN EFDPFGLSVKDL+T ++
Sbjct: 506 IGSRIFSFPHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVI 565
Query: 515 MRCNNKGD 538
RCN+ GD
Sbjct: 566 ARCNSSGD 573
Score = 53.1 bits (126), Expect(3) = 1e-24
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +1
Query: 160 IQEALNTLTLQPPDEA-WYFDTGATSHMTSNSGTLSSIF--NLSTPQNVIVGNG 312
+ + NT+TL PP + WY D+GA SHM+S++G LS+ LSTP ++IVGNG
Sbjct: 445 LAQNFNTMTLNPPAPSEWYADSGAGSHMSSDAGILSTTSPPTLSTPSSIIVGNG 498
Score = 22.3 bits (46), Expect(3) = 1e-24
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 585 LLPSP-TLWHDRLRHFG 632
LL +P +LWH RL H G
Sbjct: 587 LLAAPASLWHRRLGHLG 603
>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 989
Score = 68.2 bits (165), Expect(3) = 2e-24
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +2
Query: 338 GSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLM 517
G+T LT LN+V+ +P LIKNLISVR+FT DN + EFDP G SVKDL + +++
Sbjct: 213 GTTTLTDS-----LNNVLVSPRLIKNLISVRQFTTDNNCAVEFDPAGCSVKDLESQKVII 267
Query: 518 RCNNKG 535
RCN+ G
Sbjct: 268 RCNSSG 273
Score = 63.2 bits (152), Expect(3) = 2e-24
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Frame = +1
Query: 25 ASWPTPPCPIPTQHRTPQQRPSIHPQQGLLGPRPQAHLTDA-----TPTNIQEA------ 171
AS PP P Q+ + + QQG P P T +PT + A
Sbjct: 94 ASQQLPPAPFQQQYLQQATPAAYYGQQG--APLPSLGATTPPGFYNSPTGLPAAWDQQSL 151
Query: 172 ---LNTLTLQ-PPDEAWYFDTGATSHMTSNSGTLS--SIFNLSTPQNVIVGNGQGISI 327
+T+TLQ PP+ WYFD+GATSHMTS+S TLS + TP +++VGNG + I
Sbjct: 152 ASTFSTMTLQQPPNNEWYFDSGATSHMTSDSHTLSHPTSSRYPTPSSIVVGNGSLLPI 209
Score = 27.7 bits (60), Expect(3) = 2e-24
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 552 PLHISQAHLPHLLPSPTLWHDRLRHFG 632
PLH+ A SP+LWH RL H G
Sbjct: 277 PLHLPSAAALAAGSSPSLWHRRLGHPG 303
>ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group]
gi|255676213|dbj|BAH93053.1| Os05g0293200 [Oryza sativa
Japonica Group]
Length = 1621
Score = 75.9 bits (185), Expect(3) = 2e-24
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +2
Query: 338 GSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLM 517
GS ++ PH +LN+V+ +P +IKNLIS +FT DN+ S E DPFGLSVKD T T ++
Sbjct: 589 GSARINYPHYSFLLNNVLVSPAIIKNLISAHRFTRDNWCSVELDPFGLSVKDYPTKTKIV 648
Query: 518 RCNNKGD 538
RCN+ D
Sbjct: 649 RCNSSED 655
Score = 62.0 bits (149), Expect(3) = 2e-24
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 85 PSIHPQQGLLGPRPQ--AHLTDATPTNIQEALNTLTLQPP-DEAWYFDTGATSHMTSNSG 255
PS+ P + P+PQ A + P + NT TL PP + WY D+GA+SHMTSN+G
Sbjct: 502 PSVVPPSPHMMPQPQQWAGPSQWDPQVLATNYNTATLTPPASDEWYMDSGASSHMTSNTG 561
Query: 256 TLSSIFNLSTPQNVIVGNGQGISIRGNWLHKINLP 360
TL+ T ++VGNG + I +IN P
Sbjct: 562 TLTLAPTSPTSSCLVVGNGSLLPITATGSARINYP 596
Score = 20.8 bits (42), Expect(3) = 2e-24
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 603 LWHDRLRHFG 632
LWH RL H G
Sbjct: 682 LWHRRLGHIG 691
>ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515410 [Cicer arietinum]
Length = 909
Score = 115 bits (288), Expect = 1e-23
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 9/136 (6%)
Frame = +1
Query: 4 PWTFSPWA----SWPTPPCPIPTQHRTPQQRPSIHP-QQGLLGPRPQAHLTDA---TPTN 159
PW PW W PPCP P+ T RP+ P QQGLLGP PQA+ PTN
Sbjct: 293 PWQQYPWGWMSPPWALPPCPYPSSQWT---RPNGPPKQQGLLGPHPQAYAASTPSLAPTN 349
Query: 160 IQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLS-TPQNVIVGNGQGISIRGN 336
I+ A++T++L PPD WY D GATSHMT++ G LSS N+S + Q++IVG+GQ I IRG
Sbjct: 350 IEAAMHTMSLNPPDGQWYMDIGATSHMTASQGNLSSYSNMSNSNQHIIVGSGQQIPIRGY 409
Query: 337 WLHKINLPTPPSCLKS 384
++ PT P L++
Sbjct: 410 GHSTLSTPTKPLKLQN 425
Score = 115 bits (288), Expect = 1e-23
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 9/136 (6%)
Frame = +1
Query: 4 PWTFSPWA----SWPTPPCPIPTQHRTPQQRPSIHP-QQGLLGPRPQAHLTDA---TPTN 159
PW PW W PPCP P+ T RP+ P QQGLLGP PQA+ PTN
Sbjct: 740 PWQQYPWGWMSPPWALPPCPYPSSQWT---RPNGPPKQQGLLGPHPQAYAASTPSLAPTN 796
Query: 160 IQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLS-TPQNVIVGNGQGISIRGN 336
I+ A++T++L PPD WY D GATSHMT++ G LSS N+S + Q++IVG+GQ I IRG
Sbjct: 797 IEAAMHTMSLNPPDGQWYMDIGATSHMTASQGNLSSYSNMSNSNQHIIVGSGQQIPIRGY 856
Query: 337 WLHKINLPTPPSCLKS 384
++ PT P L++
Sbjct: 857 GHSTLSTPTKPLKLQN 872
Score = 62.8 bits (151), Expect = 8e-08
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 332 GIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKD 493
G G + L++P PL L +V++AP +IKNLI VR+ T DN VS FDPFG SV D
Sbjct: 855 GYGHSTLSTPTKPLKLQNVLHAPQIIKNLIYVRRLTTDNNVSIAFDPFGFSVND 908
Score = 59.3 bits (142), Expect = 9e-07
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +2
Query: 332 GIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGT 508
G G + L++P PL L +V++AP +IKNLI VR+ T DN VS FDPFG S T T
Sbjct: 408 GYGHSTLSTPTKPLKLQNVLHAPQIIKNLIYVRRLTTDNNVSIAFDPFGFSCHPALTVT 466
>ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669234 [Glycine max]
Length = 922
Score = 114 bits (284), Expect = 3e-23
Identities = 64/133 (48%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Frame = +1
Query: 4 PWTFSPWASWPTPPCPIPTQHRTPQQRPSI----HPQQGLLGPRPQ-AHLTDA-TPTNIQ 165
PW PW W PPCP PT P RP+ H Q +LG RPQ A++T A T T+I+
Sbjct: 238 PW---PWMQWVIPPCPYPT---APWARPNYQQPPHQQPSILGSRPQQAYITTAPTLTDIE 291
Query: 166 EALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQGISIRGNWLH 345
A++TL + P WY DTGATSHMTS SG L+S FN+S + +IVGNGQ I I G
Sbjct: 292 AAMHTLGITSPYPNWYMDTGATSHMTSTSGNLTSYFNMSNHRGIIVGNGQSIPIHGYSQT 351
Query: 346 KINLPTPPSCLKS 384
+ P PP LK+
Sbjct: 352 NLPSPHPPLALKN 364
Score = 93.2 bits (230), Expect(2) = 5e-17
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +2
Query: 332 GIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTL 511
G T L SPHPPL L +V++AP LIKNL+SVRKFT DN V+ EFDPFG VKD +TG
Sbjct: 347 GYSQTNLPSPHPPLALKNVLHAPKLIKNLVSVRKFTTDNSVTVEFDPFGFFVKDFQTGMP 406
Query: 512 LMRCNNKG 535
LMRC ++G
Sbjct: 407 LMRCESQG 414
Score = 20.8 bits (42), Expect(2) = 5e-17
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 594 SPTLWHDRLRH 626
+P+LWH +L H
Sbjct: 436 APSLWHKQLGH 446
>ref|XP_006584420.1| PREDICTED: uncharacterized protein LOC102664358 [Glycine max]
Length = 281
Score = 114 bits (284), Expect = 3e-23
Identities = 59/116 (50%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Frame = +1
Query: 4 PWTFSPWASWPTPPCPIPTQHRTPQQRPSIHP----QQGLLGPRPQAHLTDATPT--NIQ 165
PW PW W PPCP P TP RP+ Q G+LG RPQ T TPT I+
Sbjct: 170 PW---PWMQWVVPPCPYPA---TPWVRPNYQQTPRQQPGILGSRPQQAYTATTPTPTGIE 223
Query: 166 EALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQGISIRG 333
A++TL + PPD WY DTGATSHMTS SG L+S FN+S + + +GNGQ I IRG
Sbjct: 224 AAMHTLDITPPDLNWYMDTGATSHMTSTSGNLTSYFNMSNHRGITIGNGQSIPIRG 279
>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
Length = 1188
Score = 87.0 bits (214), Expect(3) = 3e-23
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +2
Query: 320 FRFGGIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLR 499
F +GS+ +P LVL++V+ AP +IKNLISVR+FT+DN S EFDPFGLS+KDL+
Sbjct: 404 FPVTSVGSSSFVTPRRSLVLSNVLVAPGIIKNLISVRRFTIDNNCSIEFDPFGLSMKDLQ 463
Query: 500 TGTLLMRCNNKGD 538
T +++ RCN+ GD
Sbjct: 464 TRSVIARCNSSGD 476
Score = 47.0 bits (110), Expect(3) = 3e-23
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 178 TLTLQPPDEAWYFDTGATSHMTSNSGTLSSIF-NLSTPQNVIVGNGQGISI 327
+L + P WY D+GA SHM +N+G L+S + + S P ++IVGNG +
Sbjct: 356 SLNVPSPSNEWYIDSGAGSHMANNAGILTSSYPSSSHPSSIIVGNGASFPV 406
Score = 20.8 bits (42), Expect(3) = 3e-23
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 603 LWHDRLRHFG 632
LWH RL H G
Sbjct: 500 LWHRRLGHLG 509
>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
Length = 964
Score = 72.0 bits (175), Expect(3) = 2e-22
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +2
Query: 338 GSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLM 517
GST L+ PH VLN+V+ +P +IKNLI VR+F DN VS EFD GL VKD + +++
Sbjct: 610 GSTHLSFPHRSFVLNNVLVSPEIIKNLIVVRRFARDNDVSVEFDKDGLDVKDFHSRNMIV 669
Query: 518 RCNNKGD 538
CN+ GD
Sbjct: 670 WCNSFGD 676
Score = 58.2 bits (139), Expect(3) = 2e-22
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +1
Query: 169 ALNTLTL-QPPDEAWYFDTGATSHMTSNSGTL--SSIFNLSTPQNVIVGNGQGISIRGNW 339
A NT++L QPP WY D+GA+SHMTS++GTL SS N +TP ++IVG+G + I
Sbjct: 551 AFNTVSLSQPPSSDWYIDSGASSHMTSDAGTLSFSSQPNPNTPSHIIVGDGSPLPITATG 610
Query: 340 LHKINLP 360
++ P
Sbjct: 611 STHLSFP 617
Score = 22.3 bits (46), Expect(3) = 2e-22
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 594 SPTLWHDRLRHFG 632
S LWH RL H G
Sbjct: 694 SSVLWHHRLGHLG 706
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 75.5 bits (184), Expect(3) = 1e-21
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +2
Query: 335 IGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLL 514
IG +K+ P+ L ++ +P +IKNLISVR+F +DN+ S EFDPFG SVKDLRT T++
Sbjct: 604 IGHSKICHPNCSFTLRDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVI 663
Query: 515 MRCNNKG 535
R N+ G
Sbjct: 664 ARFNSSG 670
Score = 52.8 bits (125), Expect(3) = 1e-21
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +1
Query: 169 ALNTLTL-QPPDEAWYFDTGATSHMTSNSGTLSSIF--NLSTPQNVIVGNGQGISI 327
+ NT TL QP WY DTGAT+HMTS++G LS N ++P +++VGNG I +
Sbjct: 546 SFNTTTLHQPATNDWYMDTGATAHMTSDTGILSLSHPPNPNSPSHIVVGNGSTIPV 601
Score = 21.2 bits (43), Expect(3) = 1e-21
Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 13/32 (40%)
Frame = +3
Query: 576 LPHLLPSPT-------------LWHDRLRHFG 632
L H LP P LWH RL H G
Sbjct: 675 LHHALPPPPAATALLANSSTDLLWHRRLGHLG 706
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 71.2 bits (173), Expect(2) = 3e-20
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +2
Query: 335 IGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLL 514
+G T + H L ++ +P +IKNLISVR+F +DN+ S EFDPFG +VKD+ T T++
Sbjct: 616 VGHTNIQHKHSTFTLRDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFTVKDMHTRTVI 675
Query: 515 MRCNNKG 535
R N+ G
Sbjct: 676 ARYNSSG 682
Score = 53.5 bits (127), Expect(2) = 3e-20
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +1
Query: 7 WTFSPWASWPTPPCPIPTQHRTPQQRPSIHPQQGLLGPRPQAHLTDATP----TNIQEAL 174
W +P + TP P+Q TP GP P A ++ A
Sbjct: 512 WLGAPPSYQVTPAPSGPSQPATPA------------GPAPTGWFQGAPSQWDQASLPGAF 559
Query: 175 NTLTLQ-PPDEAWYFDTGATSHMTSNSGTLSSIFNLST--PQNVIVGNGQGISI 327
NT TLQ PP WY D GAT+HMTS++ LS ++ P ++I+GNG I I
Sbjct: 560 NTATLQQPPSNEWYMDIGATAHMTSDACILSFTHPPTSHDPSHIIIGNGSSIPI 613
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 69.3 bits (168), Expect(2) = 4e-20
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 335 IGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLL 514
IG+TK L +++ AP+L++NL+S+R+FT DN S EFD FG SVK LRT ++
Sbjct: 407 IGTTKFD-------LKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVI 459
Query: 515 MRCNNKGD 538
+RCN++GD
Sbjct: 460 LRCNSRGD 467
Score = 55.1 bits (131), Expect(2) = 4e-20
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Frame = +1
Query: 4 PWT-FSPWASWPTPPCPIPTQHRTPQQRPSIHPQQGLLGPRPQAHLTDATP--------- 153
PW F+PWA Q + RPS GLLGP PQAH T A P
Sbjct: 282 PWVCFNPWA----------VQQQQSPWRPS--NSAGLLGPYPQAHTTFAGPYVSPPMPGL 329
Query: 154 ------------TNIQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNV 297
+ ALN L++Q P W DTGATSHM+S G L + ++ +
Sbjct: 330 PPMQQSQPNWDQAGLIAALNQLSVQSPSP-WVLDTGATSHMSSTDGILDTRLP-NSYTFI 387
Query: 298 IVGNGQGISI 327
VGNG I +
Sbjct: 388 TVGNGHTIPV 397
>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 69.3 bits (168), Expect(2) = 4e-20
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 335 IGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLL 514
IG+TK L +++ AP+L++NL+S+R+FT DN S EFD FG SVK LRT ++
Sbjct: 426 IGTTKFD-------LKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVI 478
Query: 515 MRCNNKGD 538
+RCN++GD
Sbjct: 479 LRCNSRGD 486
Score = 55.1 bits (131), Expect(2) = 4e-20
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Frame = +1
Query: 4 PWT-FSPWASWPTPPCPIPTQHRTPQQRPSIHPQQGLLGPRPQAHLTDATP--------- 153
PW F+PWA Q + RPS GLLGP PQAH T A P
Sbjct: 301 PWVCFNPWA----------VQQQQSPWRPS--NSAGLLGPYPQAHTTFAGPYVSPPMPGL 348
Query: 154 ------------TNIQEALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNV 297
+ ALN L++Q P W DTGATSHM+S G L + ++ +
Sbjct: 349 PPMQQSQPNWDQAGLIAALNQLSVQSPSP-WVLDTGATSHMSSTDGILDTRLP-NSYTFI 406
Query: 298 IVGNGQGISI 327
VGNG I +
Sbjct: 407 TVGNGHTIPV 416
>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709048|gb|ABF96843.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 594
Score = 67.0 bits (162), Expect(2) = 4e-20
Identities = 28/54 (51%), Positives = 42/54 (77%)
Frame = +2
Query: 377 LNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLMRCNNKGD 538
L HV+ AP+L++NL+S+R+FT DN S EFD FG S+KD +T +++RCN+ G+
Sbjct: 406 LRHVLVAPSLVRNLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCNSHGE 459
Score = 57.4 bits (137), Expect(2) = 4e-20
Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 RTPQQRPSIHPQQGLLGPRPQAHLTDATP----------------TNIQEALNTLTLQPP 198
R QQ+P P G+LGP PQAH A P + ALN +TL P
Sbjct: 289 RPGQQQPWRSPSAGILGPYPQAHTAFAGPYSSPPPAGSVQLAWDQAGLVAALNGMTLHNP 348
Query: 199 DEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVI-VGNGQGISI 327
+ +W +TGATSHM+S G L + L Q I VGNG I +
Sbjct: 349 N-SWVLNTGATSHMSSTDGIL--VTRLPNSQTYITVGNGHSIPV 389
>ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670172 [Glycine max]
Length = 363
Score = 103 bits (256), Expect = 6e-20
Identities = 57/127 (44%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 4 PWTFSPWASWPTPPCPIPTQHRTPQQRPSIHP----QQGLLGPRPQAHLTDATPT--NIQ 165
PW PW W PPCP P P RP+ Q G+LG RPQ T PT +I+
Sbjct: 200 PW---PWMQWVVPPCPYPA---APWVRPNYQQPPRQQPGILGSRPQQAYTATAPTRTDIE 253
Query: 166 EALNTLTLQPPDEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQGISIRGNWLH 345
A++TL + P+ WY DT ATSHMTS S L+S FN+S + + VGNGQ I I G
Sbjct: 254 AAMHTLGITSPNPNWYMDTSATSHMTSTSNNLTSYFNMSNHRGITVGNGQSIPIHG--YG 311
Query: 346 KINLPTP 366
+ NLP+P
Sbjct: 312 QTNLPSP 318
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +2
Query: 332 GIGSTKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKD 493
G G T L SPHP L L +V++AP LIKNL+ VRKFT DN V+ EFD FG SVKD
Sbjct: 309 GYGQTNLPSPHPSLALKNVLHAPKLIKNLVLVRKFTTDNSVTVEFDSFGFSVKD 362
>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
Length = 1455
Score = 65.9 bits (159), Expect(2) = 2e-18
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +2
Query: 377 LNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLMRCNNKGD 538
L HV+ AP+L++NL+SVR+FT DN S EFD FG S KD +T +++RCN+ G+
Sbjct: 487 LRHVLVAPSLVRNLLSVRQFTRDNKCSIEFDEFGFSFKDPQTRRVILRCNSHGE 540
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Frame = +1
Query: 67 RTPQQRPSIHPQQGLLGPRPQAHLTDATP----------------TNIQEALNTLTLQPP 198
R QQ+P P G+LGP PQAH P + ALN +TL P
Sbjct: 370 RPGQQQPWRAPSAGILGPYPQAHTAFTGPYSSPPPAGSVQPAWDQAGLVAALNGMTLHNP 429
Query: 199 DEAWYFDTGATSHMTSNSGTLSSIFNLSTPQNVI-VGNGQGISI 327
+ +W +TGATSHM+S G L + L Q I VG+G I I
Sbjct: 430 N-SWVLNTGATSHMSSIDGIL--VTRLPNSQTYITVGSGHSIPI 470
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 68.9 bits (167), Expect(2) = 7e-18
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +2
Query: 341 STKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLMR 520
ST + + L L++V+ +P LIKNLISV+K T DN VS EFDP G S+KDL+T + +R
Sbjct: 412 STHIPTSSTDLHLHNVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLR 471
Query: 521 CNNKGD 538
C++ GD
Sbjct: 472 CDSPGD 477
Score = 47.8 bits (112), Expect(2) = 7e-18
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Frame = +1
Query: 4 PWTFSPWA----SWPTP---PCPIPTQHRTPQQRPSIHPQQGLLGPRPQA----HLTDAT 150
PW ++PW +WP P P R P Q Q LL P A H T A
Sbjct: 284 PWGYNPWTGFVQAWPFPFRAPGAGVLGPRPPFQAQQAMTAQHLLPALPPASPGVHSTGAW 343
Query: 151 PTNIQ----EALNTLTLQPPDEA-WYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQ 315
+ ++ T PP A W+ DTGA++HM+S G L+ L + VGNG
Sbjct: 344 DNSALYSALQSAGVATTTPPSAADWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGA 403
Query: 316 GISI 327
+ +
Sbjct: 404 KLPV 407
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 68.9 bits (167), Expect(2) = 7e-18
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +2
Query: 341 STKLTSPHPPLVLNHVIYAPNLIKNLISVRKFTLDNFVSCEFDPFGLSVKDLRTGTLLMR 520
ST + + L L++V+ +P LIKNLISV+K T DN VS EFDP G S+KDL+T + +R
Sbjct: 412 STHIPTSSTDLHLHNVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLR 471
Query: 521 CNNKGD 538
C++ GD
Sbjct: 472 CDSPGD 477
Score = 47.8 bits (112), Expect(2) = 7e-18
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Frame = +1
Query: 4 PWTFSPWA----SWPTP---PCPIPTQHRTPQQRPSIHPQQGLLGPRPQA----HLTDAT 150
PW ++PW +WP P P R P Q Q LL P A H T A
Sbjct: 284 PWGYNPWTGFVQAWPFPFRAPGAGVLGPRPPFQAQQAMTAQHLLPALPPASPGVHSTGAW 343
Query: 151 PTNIQ----EALNTLTLQPPDEA-WYFDTGATSHMTSNSGTLSSIFNLSTPQNVIVGNGQ 315
+ ++ T PP A W+ DTGA++HM+S G L+ L + VGNG
Sbjct: 344 DNSALYSALQSAGVATTTPPSAADWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGA 403
Query: 316 GISI 327
+ +
Sbjct: 404 KLPV 407