BLASTX nr result
ID: Achyranthes23_contig00055110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00055110
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 67 4e-15
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 65 9e-15
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 65 1e-14
dbj|BAA22288.1| polyprotein [Oryza australiensis] 67 1e-14
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 66 1e-14
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 67 1e-14
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 64 2e-14
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 64 2e-14
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 64 2e-14
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 64 2e-14
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 63 4e-14
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 65 3e-13
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 62 3e-13
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 60 1e-12
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 60 1e-12
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 61 3e-12
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 61 3e-12
gb|EMT07582.1| Wall-associated receptor kinase 5 [Aegilops tausc... 61 8e-12
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 57 2e-11
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-... 47 7e-10
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 67.4 bits (163), Expect(2) = 4e-15
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFTND SRYGYVYLM H FQNEVQ
Sbjct: 384 VHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSDSFEKFKEFQNEVQ 437
Score = 39.3 bits (90), Expect(2) = 4e-15
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ E+A++LLG++HT
Sbjct: 363 GKMTKAPFTGQSEKASELLGLVHT 386
>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 64.7 bits (156), Expect(2) = 9e-15
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT I GPM+ A+ G+ YFITFT+D SRYGYVYLM H FQNEVQ
Sbjct: 458 VHTDICGPMSSTAKGGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKKFQNEVQ 511
Score = 40.8 bits (94), Expect(2) = 9e-15
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHTYI 185
GKMTK+ F+GQ ERA++LLG++HT I
Sbjct: 437 GKMTKAPFTGQSERASELLGLVHTDI 462
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 64.7 bits (156), Expect(2) = 1e-14
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
IHT + GPM+ AR Y YFITFT+D SRYGYVYLM H FQNEVQ
Sbjct: 143 IHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFKEFQNEVQ 196
Score = 40.4 bits (93), Expect(2) = 1e-14
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+G ERA+DLLG+IHT
Sbjct: 122 GKMTKAPFTGHSERASDLLGLIHT 145
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 67.0 bits (162), Expect(2) = 1e-14
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -2
Query: 204 VSYIHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
++ +HT + GPM+ AR GY YFITFT+D SRYGY+YLM H FQNEVQ
Sbjct: 496 LALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQ 552
Score = 37.7 bits (86), Expect(2) = 1e-14
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+G ERA+DLL ++HT
Sbjct: 478 GKMTKAPFTGHSERASDLLALVHT 501
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 66.2 bits (160), Expect(2) = 1e-14
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -2
Query: 204 VSYIHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
++ IHT + GPM+ AR G+ YFITFT+D SRYGY+YLM H FQNEVQ
Sbjct: 584 LALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSESFEKFKEFQNEVQ 640
Score = 38.5 bits (88), Expect(2) = 1e-14
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+G+ ERA+DLL +IHT
Sbjct: 566 GKMTKTPFTGRNERASDLLALIHT 589
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 66.6 bits (161), Expect(2) = 1e-14
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -2
Query: 204 VSYIHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
++ +HT + GPM+ AR G+ YFITFT+D SRYGYVYLM H FQNEVQ
Sbjct: 491 LALVHTDVCGPMSSTARSGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKEFQNEVQ 547
Score = 38.1 bits (87), Expect(2) = 1e-14
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ERA++LL ++HT
Sbjct: 473 GKMTKAPFTGQSERASELLALVHT 496
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 63.9 bits (154), Expect(2) = 2e-14
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT++ SRYGYVYLM H FQNEVQ
Sbjct: 464 VHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQ 517
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ERA++LLG++HT
Sbjct: 443 GKMTKAPFTGQSERASELLGLVHT 466
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 63.9 bits (154), Expect(2) = 2e-14
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT++ SRYGYVYLM H FQNEVQ
Sbjct: 377 VHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQ 430
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ERA++LLG++HT
Sbjct: 356 GKMTKAPFTGQSERASELLGLVHT 379
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT+D S+YGYVYLM H FQNEVQ
Sbjct: 551 VHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNEVQ 604
Score = 40.0 bits (92), Expect(2) = 2e-14
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK F+GQ ERA++LLG++HT
Sbjct: 530 GKMTKGPFTGQSERASELLGLVHT 553
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT+D S+YGYVYLM H FQNEVQ
Sbjct: 478 VHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNEVQ 531
Score = 40.0 bits (92), Expect(2) = 2e-14
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK F+GQ ERA++LLG++HT
Sbjct: 457 GKMTKGPFTGQSERASELLGLVHT 480
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 62.8 bits (151), Expect(2) = 4e-14
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQK 31
+HT + GPM+ AR G+ YFITFT+D SRYGYVYLM H FQNE K
Sbjct: 443 VHTDVCGPMSSTARGGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKKFQNEETK 497
Score = 40.4 bits (93), Expect(2) = 4e-14
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ERA++LLG++HT
Sbjct: 422 GKMTKAPFTGQSERASELLGLVHT 445
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT+D SRYGYVYLM H FQNEVQ
Sbjct: 975 VHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKEFQNEVQ 1028
Score = 35.4 bits (80), Expect(2) = 3e-13
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ER ++LL ++HT
Sbjct: 954 GKMTKAPFTGQSERTSELLVLVHT 977
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 62.4 bits (150), Expect(2) = 3e-13
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = -2
Query: 204 VSYIHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
++ +HT + GPM+ AR G+ YF TFT+D SRYGYVYLM H F NEVQ
Sbjct: 472 LALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQ 528
Score = 38.1 bits (87), Expect(2) = 3e-13
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ ERA++LL ++HT
Sbjct: 454 GKMTKAPFTGQSERASELLALVHT 477
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 59.7 bits (143), Expect(2) = 1e-12
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT+D SR GYVYLM H FQNE Q
Sbjct: 591 VHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSESVEKFKKFQNEEQ 644
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ +RA++LLG++HT
Sbjct: 570 GKMTKAPFTGQSKRASELLGLVHT 593
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 59.7 bits (143), Expect(2) = 1e-12
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFITFT+D SR GYVYLM H FQNE Q
Sbjct: 591 VHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSESVEKFKKFQNEEQ 644
Score = 38.9 bits (89), Expect(2) = 1e-12
Identities = 15/24 (62%), Positives = 22/24 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GKMTK+ F+GQ +RA++LLG++HT
Sbjct: 570 GKMTKAPFTGQSKRASELLGLVHT 593
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 61.2 bits (147), Expect(2) = 3e-12
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFI FT+D SRYGYVYLM H F NEVQ
Sbjct: 48 VHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQ 101
Score = 35.8 bits (81), Expect(2) = 3e-12
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GK+TK+ F+GQ ERA++LL ++HT
Sbjct: 27 GKITKAPFTGQSERASELLRLVHT 50
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 61.2 bits (147), Expect(2) = 3e-12
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+HT + GPM+ AR G+ YFI FT+D SRYGYVYLM H F NEVQ
Sbjct: 48 VHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQ 101
Score = 35.8 bits (81), Expect(2) = 3e-12
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHT 191
GK+TK+ F+GQ ERA++LL ++HT
Sbjct: 27 GKITKAPFTGQSERASELLRLVHT 50
>gb|EMT07582.1| Wall-associated receptor kinase 5 [Aegilops tauschii]
Length = 1303
Score = 60.8 bits (146), Expect(2) = 8e-12
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
IHT I GPM+V AR GY YF+TFT+DLSRY Y+YLM H FQ++V+
Sbjct: 296 IHTDICGPMSVEARDGYRYFLTFTDDLSRYVYIYLMKHNSEIFEKFKKFQSKVK 349
Score = 34.7 bits (78), Expect(2) = 8e-12
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHTYI 185
GKMTK+ FS ERA DLL IIHT I
Sbjct: 275 GKMTKTPFSETMERANDLLEIIHTDI 300
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGYVYLMHHXXXXXXXXXXFQNEVQ 34
+H + PM+ AR G+ YFITFT+D SRY YVYLM H FQNEVQ
Sbjct: 293 VHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSESFEKFKEFQNEVQ 346
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIH 194
GKMTK+ F+GQ ER+++LLG++H
Sbjct: 272 GKMTKAPFTGQSERSSELLGLVH 294
>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550176|gb|ABA92973.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 591
Score = 46.6 bits (109), Expect(2) = 7e-10
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = -2
Query: 195 IHTYIYGPMNVVARKGYSYFITFTNDLSRYGY 100
+HT++ G M+ A+ G+ YFITFT+DLSRYG+
Sbjct: 386 VHTHVCGSMSSTAKGGFGYFITFTDDLSRYGH 417
Score = 42.4 bits (98), Expect(2) = 7e-10
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = -1
Query: 262 GKMTKSSFSGQGERATDLLGIIHTYI 185
GKMTK+ F+GQ ERA++LLG++HT++
Sbjct: 365 GKMTKAPFTGQNERASELLGLVHTHV 390