BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00054574
         (579 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus...   283   2e-74
ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   274   1e-71
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   274   1e-71
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   272   5e-71
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   268   1e-69
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   264   1e-68
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   263   3e-68
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   261   9e-68
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   261   9e-68
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   260   2e-67
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   260   2e-67
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   257   1e-66
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   256   4e-66
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   254   9e-66
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   254   1e-65
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              252   6e-65
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   251   7e-65
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   251   1e-64
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           249   3e-64
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           249   3e-64

>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  283 bits (724), Expect = 2e-74
 Identities = 142/191 (74%), Positives = 164/191 (85%), Gaps = 4/191 (2%)
 Frame = -1

Query: 564 SVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAESRIS 397
           SVI+S+F +GLVQ+E     DS ++K    K MRKI+ NEVMK GARV+VPVSIAE+R+S
Sbjct: 100 SVIESHFREGLVQMEDEVTADSYTQKENLMKPMRKIRPNEVMKHGARVHVPVSIAETRVS 159

Query: 396 RRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXX 217
           +R+D IPCGTLYPNADEI YLQRLV+YKDS+IIVLNKPPKLPVKGNLPVHNSMD      
Sbjct: 160 KRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAA 219

Query: 216 LSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATF 37
           LSYDY EGP+LVHRLDRE+SGILL+GRTKDSAS+LQ LFTNIN AK+SC AWN+ACEAT+
Sbjct: 220 LSYDYDEGPKLVHRLDRETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATY 279

Query: 36  MRYWALVIGSP 4
            RYWALVIG+P
Sbjct: 280 QRYWALVIGTP 290


>ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X2 [Cicer arietinum]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71
 Identities = 137/191 (71%), Positives = 162/191 (84%), Gaps = 4/191 (2%)
 Frame = -1

Query: 564 SVIQSYFNKGLVQIEYLSVEDSLSRKKS----MRKIKHNEVMKAGARVYVPVSIAESRIS 397
           SVI+S+F +GLVQ+E L V+DS  +KK     MRKI+ NEVMK GARV+V VS+AE++IS
Sbjct: 99  SVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRKIRPNEVMKPGARVHVSVSMAETKIS 158

Query: 396 RRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXX 217
           +RFDPIP GTL PNADEI YLQRLV+YKDS+II+LNKPPKLPVKGNLPVHNSMD      
Sbjct: 159 KRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIMLNKPPKLPVKGNLPVHNSMDALAAAA 218

Query: 216 LSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATF 37
           LSYDY +GP+LVHRLDRESSGILL+GRTKDS S+LQ LF+NIN  K+SC AWN+ACE+T+
Sbjct: 219 LSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACESTY 278

Query: 36  MRYWALVIGSP 4
            RYWALVIG+P
Sbjct: 279 QRYWALVIGTP 289


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X1 [Cicer arietinum]
          Length = 479

 Score =  274 bits (701), Expect = 1e-71
 Identities = 137/191 (71%), Positives = 162/191 (84%), Gaps = 4/191 (2%)
 Frame = -1

Query: 564 SVIQSYFNKGLVQIEYLSVEDSLSRKKS----MRKIKHNEVMKAGARVYVPVSIAESRIS 397
           SVI+S+F +GLVQ+E L V+DS  +KK     MRKI+ NEVMK GARV+V VS+AE++IS
Sbjct: 99  SVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRKIRPNEVMKPGARVHVSVSMAETKIS 158

Query: 396 RRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXX 217
           +RFDPIP GTL PNADEI YLQRLV+YKDS+II+LNKPPKLPVKGNLPVHNSMD      
Sbjct: 159 KRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIMLNKPPKLPVKGNLPVHNSMDALAAAA 218

Query: 216 LSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATF 37
           LSYDY +GP+LVHRLDRESSGILL+GRTKDS S+LQ LF+NIN  K+SC AWN+ACE+T+
Sbjct: 219 LSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACESTY 278

Query: 36  MRYWALVIGSP 4
            RYWALVIG+P
Sbjct: 279 QRYWALVIGTP 289


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 476

 Score =  272 bits (695), Expect = 5e-71
 Identities = 139/191 (72%), Positives = 161/191 (84%), Gaps = 4/191 (2%)
 Frame = -1

Query: 564 SVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAESRIS 397
           SVI+S+F +GLVQ+E    +DS ++K    K MRKI+ NEVMK GARV+VPVSI E+RIS
Sbjct: 99  SVIESHFREGLVQME---ADDSSTQKEEQMKPMRKIRPNEVMKRGARVHVPVSICETRIS 155

Query: 396 RRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXX 217
           +R+D IP GTLYPNADEI YLQRLV+YKDS+IIVLNKPPKLPVKG+LPVHNSMD      
Sbjct: 156 KRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAA 215

Query: 216 LSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATF 37
           LSYDY EGP+LVHRLDRESSGILL+GRTKDS S+LQ LF+NIN AK+SC  WNEACEAT+
Sbjct: 216 LSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATY 275

Query: 36  MRYWALVIGSP 4
            RYWALVIG+P
Sbjct: 276 QRYWALVIGTP 286


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
           gi|550341843|gb|ERP62872.1| hypothetical protein
           POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  268 bits (684), Expect = 1e-69
 Identities = 131/194 (67%), Positives = 160/194 (82%), Gaps = 3/194 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK---KSMRKIKHNEVMKAGARVYVPVSIAES 406
           E+ DSVIQS+FNK LVQIE  S  DS+  +   K MRKIK ++VM+ GAR+++PVS+AE+
Sbjct: 79  EIQDSVIQSHFNKSLVQIECPSSSDSVEMEGLGKPMRKIKPSDVMEVGARIHIPVSVAET 138

Query: 405 RISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXX 226
            IS+RFD IP GTLYPNADEI YLQRLV YKDS+++VLNKPPK+PVKGN+P+HNSMD   
Sbjct: 139 AISKRFDTIPSGTLYPNADEIEYLQRLVKYKDSALLVLNKPPKVPVKGNMPIHNSMDALA 198

Query: 225 XXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACE 46
              LSY Y EGP+LVHRLDRESSG+LLMGRTK+S ++LQ LF+ IN A++ C AWN+ACE
Sbjct: 199 AAALSYGYDEGPKLVHRLDRESSGLLLMGRTKESIAHLQLLFSYINKAQSKCHAWNDACE 258

Query: 45  ATFMRYWALVIGSP 4
           AT+ RYWALVIGSP
Sbjct: 259 ATYQRYWALVIGSP 272


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  264 bits (674), Expect = 1e-68
 Identities = 130/193 (67%), Positives = 158/193 (81%), Gaps = 2/193 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSR--KKSMRKIKHNEVMKAGARVYVPVSIAESR 403
           E+ DS IQS+FNKGL  IE  +   S+    + S+RKIKHN++M+AGARV+V VS+AE+R
Sbjct: 86  EILDSAIQSHFNKGLAHIECPNGSGSIEYGGQMSLRKIKHNDIMEAGARVHVAVSVAETR 145

Query: 402 ISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXX 223
           IS+RFD IP GTLYPNADEI YLQRLV YKDS+IIVLNKPP+LPVKGNLP+HNSMD    
Sbjct: 146 ISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNKPPRLPVKGNLPLHNSMDALAA 205

Query: 222 XXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEA 43
             LSYDY EGP+LV RLDRESSG+LLMGRTK+S  +LQ LF+++N + + C AWN+AC+A
Sbjct: 206 AALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKA 265

Query: 42  TFMRYWALVIGSP 4
           T+ RYWALVIGSP
Sbjct: 266 TYQRYWALVIGSP 278


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 469

 Score =  263 bits (671), Expect = 3e-68
 Identities = 136/191 (71%), Positives = 155/191 (81%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRKKSMRKIKHNEVMKAGARVYVPVSIAESRIS 397
           E+ D+ I+S+FNKGLVQ+E    E S+   K MRKI+ +EVM+ GARVYV VSIAES++S
Sbjct: 94  EIDDAAIRSHFNKGLVQME---CESSIG--KHMRKIRPSEVMEEGARVYVAVSIAESKVS 148

Query: 396 RRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXX 217
           RRFD IP  TLYPNADEI YLQRLV YKDS+IIVLNKPPKLPVKGN+PVHNSMD      
Sbjct: 149 RRFDCIPSETLYPNADEIDYLQRLVKYKDSAIIVLNKPPKLPVKGNVPVHNSMDALAAAA 208

Query: 216 LSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATF 37
           LSYDY EGP+LVHRLDRESSGILLMGRTK+S   LQ L+T+INV K+SC AWN+AC A  
Sbjct: 209 LSYDYDEGPKLVHRLDRESSGILLMGRTKESLYLLQSLYTDINVGKSSCRAWNDACRAKC 268

Query: 36  MRYWALVIGSP 4
            RYWALVIGSP
Sbjct: 269 QRYWALVIGSP 279


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  261 bits (667), Expect = 9e-68
 Identities = 128/195 (65%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAE 409
           E+ DS IQS+FNKGLVQ+E  +  D+   +    K +RKIKHNEVM+ G RV+VPVSIAE
Sbjct: 87  EIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRKIKHNEVMEVGTRVWVPVSIAE 146

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXX 229
           +RIS+RFD IP GTLYPN DEI YLQRLV YKD +I+VLNKPPKLPVKG+LPVHNSMD  
Sbjct: 147 TRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPPKLPVKGSLPVHNSMDAL 206

Query: 228 XXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEAC 49
               LSYD+ EGP+LVHRLDRESSG+LLMGRTK+S ++L  LF ++N  K+SC AWN+AC
Sbjct: 207 AAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFNDLNTVKSSCKAWNDAC 266

Query: 48  EATFMRYWALVIGSP 4
           +  + R+WALVIG+P
Sbjct: 267 DVKYQRFWALVIGTP 281


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  261 bits (667), Expect = 9e-68
 Identities = 129/195 (66%), Positives = 160/195 (82%), Gaps = 4/195 (2%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAE 409
           E+  SV+QS+FNKGLV +E  +++DS   K    K +RKIK NEVM+AG R+YVPVS+AE
Sbjct: 93  EIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAE 152

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXX 229
           +RIS+RFD IP GTL+PNADEI YLQRLV YKD +I+VLNKPPK+P+KGNLPVHNSMD  
Sbjct: 153 ARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKPPKVPLKGNLPVHNSMDAL 212

Query: 228 XXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEAC 49
               L++DY+EGP+LVHRLDRESSG+LLMGRTK+S ++L  LF++IN AK+   AW++AC
Sbjct: 213 AAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDAC 272

Query: 48  EATFMRYWALVIGSP 4
           EAT  RYWALVIGSP
Sbjct: 273 EATCQRYWALVIGSP 287


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  260 bits (664), Expect = 2e-67
 Identities = 129/193 (66%), Positives = 151/193 (78%), Gaps = 2/193 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIE--YLSVEDSLSRKKSMRKIKHNEVMKAGARVYVPVSIAESR 403
           E+ DS IQS+F KGLVQ+E   L   D     K MRKI+  E+M+ GAR+++PVS+AE +
Sbjct: 90  EIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRKIRSGEIMETGARIHLPVSVAEMK 149

Query: 402 ISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXX 223
           ++RRFD IP GTLYPNADEI YLQRLV YKDS+IIVLNKPPKLPVKG LPVHNSMD    
Sbjct: 150 VARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALAD 209

Query: 222 XXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEA 43
             LSYDY +GP+LVHRLDRESSGILLMGRTK+S  +LQ LF+NI  AK +C AW EAC A
Sbjct: 210 AALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNA 269

Query: 42  TFMRYWALVIGSP 4
           T+ +YWALVIG P
Sbjct: 270 TYQKYWALVIGCP 282


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  260 bits (664), Expect = 2e-67
 Identities = 129/193 (66%), Positives = 151/193 (78%), Gaps = 2/193 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIE--YLSVEDSLSRKKSMRKIKHNEVMKAGARVYVPVSIAESR 403
           E+ DS IQS+F KGLVQ+E   L   D     K MRKI+  E+M+ GAR+++PVS+AE +
Sbjct: 90  EIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLKPMRKIRSGEIMETGARIHLPVSVAEMK 149

Query: 402 ISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXX 223
           ++RRFD IP GTLYPNADEI YLQRLV YKDS+IIVLNKPPKLPVKG LPVHNSMD    
Sbjct: 150 VARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALAD 209

Query: 222 XXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEA 43
             LSYDY +GP+LVHRLDRESSGILLMGRTK+S  +LQ LF+NI  AK +C AW EAC A
Sbjct: 210 AALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNA 269

Query: 42  TFMRYWALVIGSP 4
           T+ +YWALVIG P
Sbjct: 270 TYQKYWALVIGCP 282


>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  257 bits (657), Expect = 1e-66
 Identities = 127/190 (66%), Positives = 152/190 (80%)
 Frame = -1

Query: 573 VHDSVIQSYFNKGLVQIEYLSVEDSLSRKKSMRKIKHNEVMKAGARVYVPVSIAESRISR 394
           ++DS IQS+F +GLVQ+E   + +   + K MRKI+ +EVM+ GARVYVPVS+ ESR+SR
Sbjct: 92  IYDSTIQSHFKQGLVQMECPGMIEKEGQMKPMRKIRPSEVMEVGARVYVPVSVVESRVSR 151

Query: 393 RFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXXXL 214
           RFD IP GTLYPNADEI Y+QR V YKDS+IIVLNKPPKLPVKGNLPVHNSMD      L
Sbjct: 152 RFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAAL 211

Query: 213 SYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEATFM 34
           SY   +GP+LVHRLDRESSG+ LMGRTK+S S LQ L+T+ N  K+SC AW++ACEA + 
Sbjct: 212 SYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLLQWLYTDFNKGKSSCQAWDDACEARYQ 271

Query: 33  RYWALVIGSP 4
           RYWALVIGSP
Sbjct: 272 RYWALVIGSP 281


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  256 bits (653), Expect = 4e-66
 Identities = 127/194 (65%), Positives = 157/194 (80%), Gaps = 3/194 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSL---SRKKSMRKIKHNEVMKAGARVYVPVSIAES 406
           EV DSVIQS+FNKGLVQ+E  ++ DS     + K +RKIK NEVM+ GAR+++PVS+ E 
Sbjct: 85  EVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIRKIKTNEVMEPGARIFLPVSMVEG 144

Query: 405 RISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXX 226
           RIS+R+D IP GTL PNADEI YL+RLV Y+DS+I+VLNKPPK+P+KG+LPVHNSMD   
Sbjct: 145 RISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPKVPLKGHLPVHNSMDALA 204

Query: 225 XXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACE 46
              LSYDY EGP+LVHRLDRESSG+LLMGRTK+S S L  LF+++N +K+   AWN+ACE
Sbjct: 205 AAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACE 264

Query: 45  ATFMRYWALVIGSP 4
           A + RYWALVIGSP
Sbjct: 265 AMYQRYWALVIGSP 278


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  254 bits (650), Expect = 9e-66
 Identities = 124/192 (64%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLS-RKKSMRKIKHNEVMKAGARVYVPVSIAESRI 400
           E+  SVIQ++FNKGLVQ+E+  +  S   + + +RKIKH+EVM+ GAR++VP+S+AE+RI
Sbjct: 95  EIPGSVIQTHFNKGLVQLEFNELFTSKEGQTRLLRKIKHSEVMEVGARIHVPISVAETRI 154

Query: 399 SRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXX 220
           S+R+D IP GTLYPNADEIAYLQRLV YKD +I+VLNKPPKLP+KGNLPVHNSMD     
Sbjct: 155 SKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAILVLNKPPKLPLKGNLPVHNSMDALAAA 214

Query: 219 XLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEAT 40
            LSY+Y EGP+LVHRLDRESSG+ LMGRT++S S+L  LF+N   +K+   AWN+AC +T
Sbjct: 215 ALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNTKKSKSLSKAWNDACGST 274

Query: 39  FMRYWALVIGSP 4
           + RYWALVIGSP
Sbjct: 275 YQRYWALVIGSP 286


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  254 bits (649), Expect = 1e-65
 Identities = 127/194 (65%), Positives = 156/194 (80%), Gaps = 3/194 (1%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSL---SRKKSMRKIKHNEVMKAGARVYVPVSIAES 406
           EV DSVIQS+FNKGLVQ+E  ++ DS     + K +RKIK NEVM+ GAR+++PVS+ E 
Sbjct: 85  EVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIRKIKTNEVMEPGARIFLPVSMVEG 144

Query: 405 RISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXX 226
           RIS+R+D IP GTL PNADEI YL+RLV Y+DS+I+VLNKPPK+P+KGNLPVHNSMD   
Sbjct: 145 RISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPKVPLKGNLPVHNSMDALA 204

Query: 225 XXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACE 46
              LSYD  EGP+LVHRLDRESSG+LLMGRTK+S S L  LF+++N +K+   AWN+ACE
Sbjct: 205 AAALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACE 264

Query: 45  ATFMRYWALVIGSP 4
           A + RYWALVIGSP
Sbjct: 265 AMYQRYWALVIGSP 278


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  252 bits (643), Expect = 6e-65
 Identities = 126/197 (63%), Positives = 160/197 (81%), Gaps = 6/197 (3%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAE 409
           E+  SV+QS+FNKGLV +E  +++DS   K    K +RKIK NEVM+AG R+YVPVS+AE
Sbjct: 93  EIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAE 152

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRL--VMYKDSSIIVLNKPPKLPVKGNLPVHNSMD 235
           +RIS+RFD IP GTL+PNADEI YLQRL  + ++D +I+VLNKPPK+P+KGNLPVHNSMD
Sbjct: 153 ARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMD 212

Query: 234 XXXXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNE 55
                 L++DY+EGP+LVHRLDRESSG+LLMGRTK+S ++L  LF++IN AK+   AW++
Sbjct: 213 ALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDD 272

Query: 54  ACEATFMRYWALVIGSP 4
           ACEAT  RYWALVIGSP
Sbjct: 273 ACEATCQRYWALVIGSP 289


>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
           lycopersicum]
          Length = 475

 Score =  251 bits (642), Expect = 7e-65
 Identities = 125/192 (65%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLS-RKKSMRKIKHNEVMKAGARVYVPVSIAESRI 400
           E+  SVIQS+FNKGLVQ+E   +  S   + + +RKIKH+EVM+ GAR++VP+S+AE+RI
Sbjct: 95  EIPGSVIQSHFNKGLVQLELNELFTSKEGQTRLLRKIKHSEVMEVGARIHVPISVAETRI 154

Query: 399 SRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXXXXX 220
           S+R+D IP GTLYPNADEIAYLQRLV YKD +I+VLNKPPKLPVKGNL VHNSMD     
Sbjct: 155 SKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAILVLNKPPKLPVKGNLHVHNSMDALAAA 214

Query: 219 XLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEACEAT 40
            LSY+Y EGP+LVHRLDRESSG+ LMGRT++S S+L  LF+N   +K+   AWN+AC +T
Sbjct: 215 ALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNTKRSKSLSKAWNDACGST 274

Query: 39  FMRYWALVIGSP 4
           + RYWALVIGSP
Sbjct: 275 YQRYWALVIGSP 286


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  251 bits (640), Expect = 1e-64
 Identities = 121/195 (62%), Positives = 153/195 (78%), Gaps = 4/195 (2%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRKKS----MRKIKHNEVMKAGARVYVPVSIAE 409
           E++D  IQ++F KGLVQ+E+    D+   K+     MRKIKHNEVM+ G ++++PVSIAE
Sbjct: 93  EIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAIPMRKIKHNEVMQIGDKIWLPVSIAE 152

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXX 229
            RIS+R+D IP GTLYPNADEIAYLQRLV +KDS+IIVLNKPPKLPVKGN+P+HNSMD  
Sbjct: 153 MRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDAL 212

Query: 228 XXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEAC 49
               LS+   EGP+LVHRLDRE+SG+L+MGRTK+S  YL  +F++     +SC AWN+AC
Sbjct: 213 AAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKAC 272

Query: 48  EATFMRYWALVIGSP 4
           EA + +YWALVIGSP
Sbjct: 273 EAMYQQYWALVIGSP 287


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  249 bits (637), Expect = 3e-64
 Identities = 130/195 (66%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAE 409
           EVHD+VIQS+FNK LVQ+E  +  D L+ +    K MRKIK NEVM  G R+YVPVS+AE
Sbjct: 76  EVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTRIYVPVSVAE 135

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXX 229
           SRIS+RFD IP GTL+PNADEIAYLQRL    DS+I+VLNKPP+LPVKG+LPVHNSMD  
Sbjct: 136 SRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNKPPRLPVKGHLPVHNSMDAL 191

Query: 228 XXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEAC 49
               LSYDY EGP+LVHRLDR+SSG+LLMGRTK+S S+L+ LF+NI        AWN+AC
Sbjct: 192 AAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEWLFSNIK-------AWNDAC 244

Query: 48  EATFMRYWALVIGSP 4
           EA + +YWALVIGSP
Sbjct: 245 EAKYQKYWALVIGSP 259


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  249 bits (637), Expect = 3e-64
 Identities = 130/195 (66%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
 Frame = -1

Query: 576 EVHDSVIQSYFNKGLVQIEYLSVEDSLSRK----KSMRKIKHNEVMKAGARVYVPVSIAE 409
           EVHD+VIQS+FNK LVQ+E  +  D L+ +    K MRKIK NEVM  G R+YVPVS+AE
Sbjct: 76  EVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIKPNEVMVEGTRIYVPVSVAE 135

Query: 408 SRISRRFDPIPCGTLYPNADEIAYLQRLVMYKDSSIIVLNKPPKLPVKGNLPVHNSMDXX 229
           SRIS+RFD IP GTL+PNADEIAYLQRL    DS+I+VLNKPP+LPVKG+LPVHNSMD  
Sbjct: 136 SRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNKPPRLPVKGHLPVHNSMDAL 191

Query: 228 XXXXLSYDYQEGPQLVHRLDRESSGILLMGRTKDSASYLQQLFTNINVAKTSCLAWNEAC 49
               LSYDY EGP+LVHRLDR+SSG+LLMGRTK+S S+L+ LF+NI        AWN+AC
Sbjct: 192 AAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEWLFSNIK-------AWNDAC 244

Query: 48  EATFMRYWALVIGSP 4
           EA + +YWALVIGSP
Sbjct: 245 EAKYQKYWALVIGSP 259