BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00053928
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    53   2e-09
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    51   7e-09
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    51   1e-08
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    52   1e-08
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    54   1e-07
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    46   2e-07
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    45   2e-07
ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261...    46   4e-07
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    47   6e-07
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    43   7e-07
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    45   1e-06

>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = -2

Query: 324 LDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDTYALWHRHLGHLSETILKNVPR- 148
           +D+T+R   +IGKR+ G + + + +    +VH+S    + LWHR LGH S+ I+  +PR 
Sbjct: 476 VDRTTRMVTRIGKRENGSFCF-RGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRE 534

Query: 147 LKNCGTKSFYYFCDVC 100
           L + G +     CD C
Sbjct: 535 LLSSGKEILENVCDTC 550



 Score = 34.3 bits (77), Expect(2) = 2e-09
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 77  TFPFCTSQATLPFSLIQCDFWGPYR 3
           TFP   +++   F LI CD WGPYR
Sbjct: 559 TFPLSDNRSMDSFQLIHCDVWGPYR 583


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 51.2 bits (121), Expect(2) = 7e-09
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -2

Query: 321 DQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDTYALWHRHLGHLSETILKNVPR-L 145
           D+T+R    IGKR+ G + + + +    +VH+S    + LWHR LGH S+ I+  +PR L
Sbjct: 253 DRTTRMVTGIGKRENGSFCF-RGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPREL 311

Query: 144 KNCGTKSFYYFCDVC 100
            + G +     CD C
Sbjct: 312 LSSGKEILENVCDTC 326



 Score = 34.3 bits (77), Expect(2) = 7e-09
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 77  TFPFCTSQATLPFSLIQCDFWGPYR 3
           TFP   +++   F LI CD WGPYR
Sbjct: 335 TFPLSDNRSMDSFQLIHCDVWGPYR 359


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 51.2 bits (121), Expect(2) = 1e-08
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -2

Query: 321 DQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDTYALWHRHLGHLSETILKNVPR-L 145
           D+T+R    IGKR+ G + + + +    +VH+S    + LWHR LGH S+ I+  +PR L
Sbjct: 253 DRTTRMVTGIGKRENGSFCF-RGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPREL 311

Query: 144 KNCGTKSFYYFCDVC 100
            + G +     CD C
Sbjct: 312 LSSGKEILENVCDTC 326



 Score = 33.5 bits (75), Expect(2) = 1e-08
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 77  TFPFCTSQATLPFSLIQCDFWGPYR 3
           TFP   +++   F LI CD WGPYR
Sbjct: 335 TFPLRDNRSMDSFQLIHCDVWGPYR 359


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 52.4 bits (124), Expect(2) = 1e-08
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -2

Query: 330 FLLDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDT-YALWHRHLGHLSETILKNV 154
           FL D++S+  I  G+ +GG+YY      T   +H+++ D+  ALWH+ LGH S ++L ++
Sbjct: 488 FLQDRSSKTLIGSGEERGGVYYLTDV--TPAKIHTANVDSDQALWHQRLGHPSFSVLSSL 545

Query: 153 PRLKNCGTKSFYYFCDVC 100
           P      +    + CDVC
Sbjct: 546 PLFSKTSSTVTSHSCDVC 563



 Score = 32.0 bits (71), Expect(2) = 1e-08
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP   ++    FSLI CD WGPYR
Sbjct: 573 FPESINKTEECFSLIHCDVWGPYR 596


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -2

Query: 321 DQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDTYALWHRHLGHLSETILKNVPRLK 142
           D+TSRN I +GK + G+YYY K L           + Y LWHR LGH S+ +L ++  L 
Sbjct: 350 DRTSRNPIGVGKLRNGVYYY-KPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHSLG 408

Query: 141 NCGTKSFY-YFCDVC 100
           N   K    Y CD C
Sbjct: 409 NNVMKGIEDYVCDSC 423



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 80  STFPFCTSQATLPFSLIQCDFWGPYR 3
           ++F     +A   F+LI  D WGPYR
Sbjct: 431 NSFQLSNKRAFEIFNLIHVDIWGPYR 456


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = -2

Query: 327 LLDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDT-YALWHRHLGHLSETILKNVP 151
           L D+ SR  I  G+ + G+YY      T  +VH     T +ALWH+ LGH S ++L ++P
Sbjct: 472 LQDRFSRTLIGTGEERDGVYYLTDAATT--TVHKVDVTTDHALWHQRLGHPSFSVLSSLP 529

Query: 150 RLKNCGTKSFYYFCDVC 100
                        CDVC
Sbjct: 530 LFSGSSCSVSSRSCDVC 546



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP  ++++T  FSLI CD WGPYR
Sbjct: 556 FPDSSNKSTDCFSLIHCDVWGPYR 579


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = -2

Query: 327 LLDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDT-YALWHRHLGHLSETILKNVP 151
           L D+ SR  I  G+ + G+YY      T  +VH     T +ALWH+ LGH S ++L ++P
Sbjct: 472 LQDRFSRTLIGTGEERDGVYYLTDAATT--TVHKVDITTDHALWHQRLGHPSFSVLSSLP 529

Query: 150 RLKNCGTKSFYYFCDVC 100
                        CDVC
Sbjct: 530 LFSGSSCSVSSRSCDVC 546



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP  ++++T  FSLI CD WGPYR
Sbjct: 556 FPDSSNKSTDCFSLIHCDVWGPYR 579


>ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261123 [Solanum
           lycopersicum]
          Length = 943

 Score = 45.8 bits (107), Expect(2) = 4e-07
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = -2

Query: 327 LLDQTSRNQIQIGKRQGGLYYYYKE---------------LNTIGSVHSSSPDTYALWHR 193
           L D  S     IGK + GLY +Y +               + TI SV +++     +WH+
Sbjct: 480 LQDLGSGKVRMIGKEEDGLYTFYSQPGQYDHNKMLQPHHCMTTIQSVEANAN----IWHQ 535

Query: 192 HLGHLSETILKNVPRLKNCGTKSFYYFCDVCPIA 91
            LGH+   +++ +      G K   + CD+CP+A
Sbjct: 536 RLGHVPMGVIRKISSFHKFGNKFALHKCDICPLA 569



 Score = 33.5 bits (75), Expect(2) = 4e-07
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP  TS +T  F L+  D WGPYR
Sbjct: 576 FPHSTSSSTCVFQLLHMDVWGPYR 599


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 47.0 bits (110), Expect(2) = 6e-07
 Identities = 30/79 (37%), Positives = 36/79 (45%)
 Frame = -2

Query: 327 LLDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDTYALWHRHLGHLSETILKNVPR 148
           L D  S   I  GK++GGLYY +   N     H S P    LWH  LGH S +  K + R
Sbjct: 730 LQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSD--LWHLRLGHPSFSRFKLLSR 787

Query: 147 LKNCGTKSFYYFCDVCPIA 91
           L     K     C +CP A
Sbjct: 788 LLPDIHKEIGNHCPICPQA 806



 Score = 32.0 bits (71), Expect(2) = 6e-07
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP  +     PFSL+ CD WGP++
Sbjct: 813 FPKSSITTKFPFSLLHCDVWGPHK 836


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 43.1 bits (100), Expect(2) = 7e-07
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = -2

Query: 324 LDQTSRNQIQIGKRQGGLYYYYKELNTIGSVHSSSPDT-YALWHRHLGHLSETILKNVPR 148
           LD+ SR  I  G+ + G+YY          +H++   +  ALWH+ LGH S ++L ++P 
Sbjct: 51  LDRFSRTLIGSGEERDGVYYLTDVATA--KIHTAKVSSDQALWHQRLGHPSFSVLSSLPV 108

Query: 147 LKNCGTKSFYYFCDVC 100
           L +         CDVC
Sbjct: 109 LTSSSLSVGSRSCDVC 124



 Score = 35.4 bits (80), Expect(2) = 7e-07
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 74  FPFCTSQATLPFSLIQCDFWGPYR 3
           FP  T+++   FSLI CD WGPYR
Sbjct: 134 FPVSTNKSIECFSLIHCDVWGPYR 157


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = -2

Query: 321 DQTSRNQIQIGKRQGGLYYYYKELN--TIGSVHSSSPDTYALWHRHLGHLSETILKNVPR 148
           D T+R  I +GK+  GLYY  ++ N     ++H  S     LWH+ LGH S   L+ + +
Sbjct: 501 DATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSD----LWHQRLGHPSSGPLQVLAK 556

Query: 147 LKNCGTKSFYYFCDVCPIA 91
           +         + CD+CP+A
Sbjct: 557 VNPKIYFDSKHVCDICPLA 575



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 77  TFPFCTSQATLPFSLIQCDFWGPYR 3
           +FP     +  PF LI CD WGP+R
Sbjct: 581 SFPSSFISSHAPFDLIHCDIWGPHR 605