BLASTX nr result

ID: Achyranthes23_contig00052641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00052641
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...    39   5e-06
emb|CBI16054.3| unnamed protein product [Vitis vinifera]               39   5e-06

>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score = 38.9 bits (89), Expect(3) = 5e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 96  NLTQQTYEPLILTCSRQKAFSDAFDVHRNLI 4
           N TQ TYE LIL+C+RQ +     D+HR+LI
Sbjct: 75  NPTQHTYELLILSCTRQNSLPQGIDLHRHLI 105



 Score = 33.1 bits (74), Expect(3) = 5e-06
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -1

Query: 203 TSKTNHHHKSTNKNPLIQTLCKKGDLK*AL 114
           ++ T  +  S N NPLIQ+LCK+G+L  AL
Sbjct: 38  STTTRSNGDSNNNNPLIQSLCKQGNLNQAL 67



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 139 RKGTSNKPFQLL*LEPNPT 83
           ++G  N+  Q+L  EPNPT
Sbjct: 59  KQGNLNQALQVLSQEPNPT 77


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 38.9 bits (89), Expect(3) = 5e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 96  NLTQQTYEPLILTCSRQKAFSDAFDVHRNLI 4
           N TQ TYE LIL+C+RQ +     D+HR+LI
Sbjct: 75  NPTQHTYELLILSCTRQNSLPQGIDLHRHLI 105



 Score = 33.1 bits (74), Expect(3) = 5e-06
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -1

Query: 203 TSKTNHHHKSTNKNPLIQTLCKKGDLK*AL 114
           ++ T  +  S N NPLIQ+LCK+G+L  AL
Sbjct: 38  STTTRSNGDSNNNNPLIQSLCKQGNLNQAL 67



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 139 RKGTSNKPFQLL*LEPNPT 83
           ++G  N+  Q+L  EPNPT
Sbjct: 59  KQGNLNQALQVLSQEPNPT 77


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