BLASTX nr result
ID: Achyranthes23_contig00052530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00052530
(261 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004502201.1| PREDICTED: mediator of RNA polymerase II tra... 115 6e-24
ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II tra... 115 6e-24
ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Popu... 114 1e-23
ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Popu... 112 4e-23
ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II tra... 112 5e-23
ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II tra... 111 9e-23
ref|XP_006601868.1| PREDICTED: mediator of RNA polymerase II tra... 111 9e-23
ref|XP_006392648.1| hypothetical protein EUTSA_v10011178mg [Eutr... 110 2e-22
ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263... 109 4e-22
emb|CBI16537.3| unnamed protein product [Vitis vinifera] 109 4e-22
emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera] 109 4e-22
ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II tra... 108 6e-22
ref|XP_006591429.1| PREDICTED: mediator of RNA polymerase II tra... 108 6e-22
ref|XP_006591428.1| PREDICTED: mediator of RNA polymerase II tra... 108 6e-22
gb|AAG51574.1|AC027034_20 acetyl-CoA synthetase, putative; 45051... 107 1e-21
ref|NP_849809.2| RNA polymerase II transcription mediator [Arabi... 107 1e-21
ref|NP_001185237.1| RNA polymerase II transcription mediator [Ar... 107 1e-21
ref|XP_002891829.1| hypothetical protein ARALYDRAFT_314757 [Arab... 107 1e-21
ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II tra... 107 2e-21
ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II tra... 107 2e-21
>ref|XP_004502201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Cicer arietinum]
Length = 1959
Score = 115 bits (288), Expect = 6e-24
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPG-TLM 84
+G MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD SP G + M
Sbjct: 518 KGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALILSAPDCGDVNSSPAGASAM 577
Query: 83 DVADQTLLPTGFQMFESFHLTPTGMDE 3
DV+DQ LLP GF FESF TP + E
Sbjct: 578 DVSDQMLLPIGFSSFESFDPTPPSVME 604
>ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Cicer arietinum]
Length = 1949
Score = 115 bits (288), Expect = 6e-24
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPG-TLM 84
+G MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD SP G + M
Sbjct: 507 KGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALILSAPDCGDVNSSPAGASAM 566
Query: 83 DVADQTLLPTGFQMFESFHLTPTGMDE 3
DV+DQ LLP GF FESF TP + E
Sbjct: 567 DVSDQMLLPIGFSSFESFDPTPPSVME 593
>ref|XP_002304853.2| hypothetical protein POPTR_0003s21030g [Populus trichocarpa]
gi|550343676|gb|EEE79832.2| hypothetical protein
POPTR_0003s21030g [Populus trichocarpa]
Length = 1588
Score = 114 bits (285), Expect = 1e-23
Identities = 56/81 (69%), Positives = 63/81 (77%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RGAGMDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L+ G DCG+ +P G +MD
Sbjct: 138 RGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFSGPDCGEVANTPIG-VMD 196
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V DQ LLP F FESF+ +P
Sbjct: 197 VVDQMLLPAAFPSFESFNPSP 217
>ref|XP_006368536.1| hypothetical protein POPTR_0001s04140g [Populus trichocarpa]
gi|550346479|gb|ERP65105.1| hypothetical protein
POPTR_0001s04140g [Populus trichocarpa]
Length = 1587
Score = 112 bits (281), Expect = 4e-23
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RGAGMDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L+ G DCG+ SP G +MD
Sbjct: 138 RGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFSGPDCGEVANSPIG-VMD 196
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V DQ L P F FESF+ +P
Sbjct: 197 VVDQMLPPVAFPSFESFNPSP 217
>ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like [Solanum lycopersicum]
Length = 1987
Score = 112 bits (280), Expect = 5e-23
Identities = 54/81 (66%), Positives = 61/81 (75%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
R AGMDI+ALLSEFGDFGDFF NDALPFGEPPGTAE+Q L+ P D D SP ++MD
Sbjct: 511 RNAGMDIQALLSEFGDFGDFFENDALPFGEPPGTAEAQALMFPAADSVDVSSSPCPSMMD 570
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V DQ LLP GF F+SF+ P
Sbjct: 571 VQDQILLPVGFSSFDSFNQPP 591
>ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Glycine max]
Length = 1951
Score = 111 bits (278), Expect = 9e-23
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD S PG ++D
Sbjct: 512 RGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSS-PGGVID 570
Query: 80 VADQTLLPTGFQMFESFHLTPT 15
V DQ LLP GF FESF+ P+
Sbjct: 571 VPDQILLPVGFASFESFNPPPS 592
>ref|XP_006601868.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Glycine max]
Length = 1952
Score = 111 bits (278), Expect = 9e-23
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD S PG ++D
Sbjct: 513 RGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSS-PGGVID 571
Query: 80 VADQTLLPTGFQMFESFHLTPT 15
V DQ LLP GF FESF+ P+
Sbjct: 572 VPDQILLPVGFASFESFNPPPS 593
>ref|XP_006392648.1| hypothetical protein EUTSA_v10011178mg [Eutrema salsugineum]
gi|567131267|ref|XP_006392649.1| hypothetical protein
EUTSA_v10011178mg [Eutrema salsugineum]
gi|557089226|gb|ESQ29934.1| hypothetical protein
EUTSA_v10011178mg [Eutrema salsugineum]
gi|557089227|gb|ESQ29935.1| hypothetical protein
EUTSA_v10011178mg [Eutrema salsugineum]
Length = 1894
Score = 110 bits (275), Expect = 2e-22
Identities = 57/86 (66%), Positives = 64/86 (74%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG GMDI+ALLSEFGDFGDFF NDALPFGEPPGTAES L+ P D D G SP +MD
Sbjct: 483 RGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHALMFP-PDSADVGSSPV-DMMD 540
Query: 80 VADQTLLPTGFQMFESFHLTPTGMDE 3
V+DQ +LP GF FESF+ P +DE
Sbjct: 541 VSDQIVLPVGFSSFESFNPVPPIIDE 566
>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
Length = 1932
Score = 109 bits (272), Expect = 4e-22
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RGA MDI+ALLSEFGDFGDFF NDALPFGEPPGTAES L+ P DC G SP +MD
Sbjct: 486 RGAVMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHALIFPAPDC--EGSSPCTGMMD 543
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V+DQ LL GFQ F++F+ +P
Sbjct: 544 VSDQMLLSVGFQSFDNFNPSP 564
>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
Length = 1812
Score = 109 bits (272), Expect = 4e-22
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RGA MDI+ALLSEFGDFGDFF NDALPFGEPPGTAES L+ P DC G SP +MD
Sbjct: 513 RGAVMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHALIFPAPDC--EGSSPCTGMMD 570
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V+DQ LL GFQ F++F+ +P
Sbjct: 571 VSDQMLLSVGFQSFDNFNPSP 591
>emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]
Length = 1154
Score = 109 bits (272), Expect = 4e-22
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RGA MDI+ALLSEFGDFGDFF NDALPFGEPPGTAES L+ P DC G SP +MD
Sbjct: 528 RGAVMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHALIFPAPDC--EGSSPCTGMMD 585
Query: 80 VADQTLLPTGFQMFESFHLTP 18
V+DQ LL GFQ F++F+ +P
Sbjct: 586 VSDQMLLSVGFQSFDNFNPSP 606
>ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X3 [Glycine max]
Length = 1951
Score = 108 bits (271), Expect = 6e-22
Identities = 54/82 (65%), Positives = 61/82 (74%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD S PG ++D
Sbjct: 513 RGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSS-PGGVID 571
Query: 80 VADQTLLPTGFQMFESFHLTPT 15
V Q LLP GF FESF+ P+
Sbjct: 572 VPGQILLPVGFPSFESFNPPPS 593
>ref|XP_006591429.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Glycine max]
Length = 1952
Score = 108 bits (271), Expect = 6e-22
Identities = 54/82 (65%), Positives = 61/82 (74%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD S PG ++D
Sbjct: 512 RGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSS-PGGVID 570
Query: 80 VADQTLLPTGFQMFESFHLTPT 15
V Q LLP GF FESF+ P+
Sbjct: 571 VPGQILLPVGFPSFESFNPPPS 592
>ref|XP_006591428.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Glycine max]
Length = 1953
Score = 108 bits (271), Expect = 6e-22
Identities = 54/82 (65%), Positives = 61/82 (74%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
RG MDI+ALLSEFGDFGDFF ND LPFGEPPGTAESQ L++ DCGD S PG ++D
Sbjct: 513 RGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSS-PGGVID 571
Query: 80 VADQTLLPTGFQMFESFHLTPT 15
V Q LLP GF FESF+ P+
Sbjct: 572 VPGQILLPVGFPSFESFNPPPS 593
>gb|AAG51574.1|AC027034_20 acetyl-CoA synthetase, putative; 45051-31547 [Arabidopsis thaliana]
Length = 2655
Score = 107 bits (268), Expect = 1e-21
Identities = 57/86 (66%), Positives = 63/86 (73%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
R GMDI+ALLSEFGDFGDFF NDALPFGEPPGTAES LV P D D G SP +MD
Sbjct: 1218 REVGMDIKALLSEFGDFGDFFENDALPFGEPPGTAESHVLVFP-PDSADVGSSPV-DMMD 1275
Query: 80 VADQTLLPTGFQMFESFHLTPTGMDE 3
V+DQ +LP GF FESF+ P +DE
Sbjct: 1276 VSDQIVLPVGFSSFESFNPVPPIIDE 1301
>ref|NP_849809.2| RNA polymerase II transcription mediator [Arabidopsis thaliana]
gi|378548405|sp|F4I096.1|MED13_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
13; AltName: Full=Protein GRAND CENTRAL; AltName:
Full=Protein MACCHI-BOU 2 gi|332195106|gb|AEE33227.1|
RNA polymerase II transcription mediator [Arabidopsis
thaliana]
Length = 1921
Score = 107 bits (268), Expect = 1e-21
Identities = 57/86 (66%), Positives = 63/86 (73%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
R GMDI+ALLSEFGDFGDFF NDALPFGEPPGTAES LV P D D G SP +MD
Sbjct: 496 REVGMDIKALLSEFGDFGDFFENDALPFGEPPGTAESHVLVFP-PDSADVGSSPV-DMMD 553
Query: 80 VADQTLLPTGFQMFESFHLTPTGMDE 3
V+DQ +LP GF FESF+ P +DE
Sbjct: 554 VSDQIVLPVGFSSFESFNPVPPIIDE 579
>ref|NP_001185237.1| RNA polymerase II transcription mediator [Arabidopsis thaliana]
gi|332195107|gb|AEE33228.1| RNA polymerase II
transcription mediator [Arabidopsis thaliana]
Length = 2001
Score = 107 bits (268), Expect = 1e-21
Identities = 57/86 (66%), Positives = 63/86 (73%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
R GMDI+ALLSEFGDFGDFF NDALPFGEPPGTAES LV P D D G SP +MD
Sbjct: 486 REVGMDIKALLSEFGDFGDFFENDALPFGEPPGTAESHVLVFP-PDSADVGSSPV-DMMD 543
Query: 80 VADQTLLPTGFQMFESFHLTPTGMDE 3
V+DQ +LP GF FESF+ P +DE
Sbjct: 544 VSDQIVLPVGFSSFESFNPVPPIIDE 569
>ref|XP_002891829.1| hypothetical protein ARALYDRAFT_314757 [Arabidopsis lyrata subsp.
lyrata] gi|297337671|gb|EFH68088.1| hypothetical protein
ARALYDRAFT_314757 [Arabidopsis lyrata subsp. lyrata]
Length = 2638
Score = 107 bits (268), Expect = 1e-21
Identities = 56/86 (65%), Positives = 63/86 (73%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAESQELVIPGQDCGDGGGSPPGTLMD 81
R GMDI+ALLSEFGDFGDFF NDALPFGEPPGTAES L+ P D D G SP +MD
Sbjct: 1211 REVGMDIKALLSEFGDFGDFFENDALPFGEPPGTAESHALIFP-PDSADVGSSPV-DMMD 1268
Query: 80 VADQTLLPTGFQMFESFHLTPTGMDE 3
V+DQ +LP GF FESF+ P +DE
Sbjct: 1269 VSDQIVLPVGFSSFESFNPVPPIIDE 1294
>ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Solanum tuberosum]
Length = 1962
Score = 107 bits (266), Expect = 2e-21
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAE--SQELVIPGQDCGDGGGSPPGTL 87
R AGMDI+ALLSEFGDFGDFF NDALPFGEPPGTAE +Q L+ P D D SP ++
Sbjct: 511 RDAGMDIQALLSEFGDFGDFFENDALPFGEPPGTAEAQAQALMFPAADSVDVSSSPCPSM 570
Query: 86 MDVADQTLLPTGFQMFESFHLTP 18
MDV DQ LLP GF F+SF+ P
Sbjct: 571 MDVQDQILLPVGFSSFDSFNQPP 593
>ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Solanum tuberosum]
Length = 1989
Score = 107 bits (266), Expect = 2e-21
Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -2
Query: 260 RGAGMDIEALLSEFGDFGDFFVNDALPFGEPPGTAE--SQELVIPGQDCGDGGGSPPGTL 87
R AGMDI+ALLSEFGDFGDFF NDALPFGEPPGTAE +Q L+ P D D SP ++
Sbjct: 511 RDAGMDIQALLSEFGDFGDFFENDALPFGEPPGTAEAQAQALMFPAADSVDVSSSPCPSM 570
Query: 86 MDVADQTLLPTGFQMFESFHLTP 18
MDV DQ LLP GF F+SF+ P
Sbjct: 571 MDVQDQILLPVGFSSFDSFNQPP 593