BLASTX nr result

ID: Achyranthes23_contig00052354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00052354
         (513 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Popu...    71   2e-10
ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing fac...    64   3e-08
ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing fac...    64   3e-08
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...    63   5e-08
gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]    60   2e-07
ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293...    60   3e-07
emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]    60   3e-07
ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing fac...    58   1e-06
ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citr...    58   1e-06
ref|XP_001459079.1| hypothetical protein [Paramecium tetraurelia...    57   3e-06
ref|XP_001448617.1| hypothetical protein [Paramecium tetraurelia...    57   3e-06
ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing fac...    56   6e-06

>ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa]
           gi|222854422|gb|EEE91969.1| hypothetical protein
           POPTR_0006s22220g [Populus trichocarpa]
          Length = 693

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
 Frame = +3

Query: 3   NNSDFDGQMEFDRYDP--NFVDKSDEE-----YEVRGLEDLAGSQSAGISLDKNRLLNP- 158
           N    +  +EFDRYDP   F  ++++E     Y    L   +  ++AG     +  LN  
Sbjct: 184 NEVGVENGVEFDRYDPYEGFDRRNNDENLQKAYSGGTLALQSSQENAGGDHASDATLNRL 243

Query: 159 DDKRGQQICFNCGNSGHRMRDCPLDEAFQEKST----YHSDHSH-DAKAKSEVRRADSRS 323
            D + Q+ C+ CG SGH+MR+CP + A Q   T     H+D  H   + K +  +  SRS
Sbjct: 244 SDVKSQETCYKCGGSGHKMRNCPQENASQRNVTRFDSRHTDDIHRSGRGKGDPEKNGSRS 303

Query: 324 GGRLQSSNRDSRSLRRPDKDLKPSHSGKVE--IKGRRFPAENESRKDMREDNNSKRRRDR 497
             +LQSS RD+   RR   D + S SG+ E   +  R     E+    +++   KR+R +
Sbjct: 304 WEKLQSS-RDAIPGRRLKNDKESSGSGRHEEVTRNGRSAVSKETDWSCKKEYERKRQRRK 362

Query: 498 D 500
           +
Sbjct: 363 E 363


>ref|XP_006575296.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X2
           [Glycine max]
          Length = 642

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
 Frame = +3

Query: 27  MEFDRYDP---NFVDKSDEEYEVR---GLEDLAGSQSAGISLDKNRLLNPDDKRGQQICF 188
           +EFDRY+P   N     +E+Y V    G       ++   ++ ++    P+  + QQICF
Sbjct: 180 IEFDRYEPYQGNDRKHDNEDYHVGYSGGSPAAHSLENVSRAIGEDTSNRPNGSKFQQICF 239

Query: 189 NCGNSGHRMRDCPLDEAFQEKST---YHSDHSHDAKAKSE-VRRADSRSGGRLQSSNRDS 356
            CG+ GH++R+CP +   Q K        ++  D K KSE V + +S S  +LQ SN + 
Sbjct: 240 RCGDPGHKIRNCPKEHTSQRKYNRLDVWQNNRIDKKHKSEDVNKFESDSLAKLQ-SNLEP 298

Query: 357 RSLR--RPDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNSKRRRDRD 500
            SLR  R  + L  S       +   FP   E+ +  +++   K+R   D
Sbjct: 299 LSLRHQRDGRRLSGSRHHHAPWRNESFPGARETDRHKKKEYVGKKRSRND 348


>ref|XP_006575295.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
           [Glycine max]
          Length = 669

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
 Frame = +3

Query: 27  MEFDRYDP---NFVDKSDEEYEVR---GLEDLAGSQSAGISLDKNRLLNPDDKRGQQICF 188
           +EFDRY+P   N     +E+Y V    G       ++   ++ ++    P+  + QQICF
Sbjct: 180 IEFDRYEPYQGNDRKHDNEDYHVGYSGGSPAAHSLENVSRAIGEDTSNRPNGSKFQQICF 239

Query: 189 NCGNSGHRMRDCPLDEAFQEKST---YHSDHSHDAKAKSE-VRRADSRSGGRLQSSNRDS 356
            CG+ GH++R+CP +   Q K        ++  D K KSE V + +S S  +LQ SN + 
Sbjct: 240 RCGDPGHKIRNCPKEHTSQRKYNRLDVWQNNRIDKKHKSEDVNKFESDSLAKLQ-SNLEP 298

Query: 357 RSLR--RPDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNSKRRRDRD 500
            SLR  R  + L  S       +   FP   E+ +  +++   K+R   D
Sbjct: 299 LSLRHQRDGRRLSGSRHHHAPWRNESFPGARETDRHKKKEYVGKKRSRND 348


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
           gi|223530325|gb|EEF32219.1| Splicing factor,
           arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 56/177 (31%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
 Frame = +3

Query: 3   NNSDFDGQMEFDRYDP-----NFVDKSDEEYEVRGLEDLAGSQSAGISLDKNRLLN---P 158
           N +     + F+RY+P        D    +   RG           I  D +  +N    
Sbjct: 178 NENGLKNDVVFERYEPCPDYERKYDSGVHQLAYRGGSPALRRPQKDIGRDNSNEVNLKCS 237

Query: 159 DDKRGQQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHD---AKAKSEVRRADSRSGG 329
            D   Q  C+ CG SGH+MR+CP + +    ST  SD  HD       SE RR  SRS  
Sbjct: 238 RDANFQATCYQCGGSGHKMRNCPQESSSLRNST-RSDPRHDDRRGSGGSERRRFGSRSQE 296

Query: 330 RLQSSNRDSRSLRRPDKDLKPSHSGKVE--IKGRRFPAENESRKDMR-EDNNSKRRR 491
           R   S+RDS   R    D K S  GK +  I     P  NE+ K ++  D  +KR R
Sbjct: 297 R---SSRDSMPKRLLKNDTKSSSLGKDQKSIWNGSSPVGNETDKSLKTHDGGNKRSR 350


>gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 667

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
 Frame = +3

Query: 9   SDFDGQMEFDRYDPNF-VDKSDEEYEVRGLEDLAGS------QSAGISLDKNRLLN-PDD 164
           +D DG M FD Y+P+   D+ D + E R  E   GS       + G   D +R+L  P+ 
Sbjct: 180 ADKDG-MAFDHYEPDKGYDRKDRD-ENRWRESSGGSALGSSQDNVGRERDGDRVLKRPNH 237

Query: 165 KRGQQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHDAKAKS----EVRRADSRSGGR 332
            + QQ C+ CG  GH+MRDCP   + + K T       D   KS    E+ R  S+S G 
Sbjct: 238 LKFQQNCYGCGALGHKMRDCPRKHSSRRKFTRFERSQDDDIEKSRGGGELERFRSKSRGN 297

Query: 333 LQSS---------NRDSRSLRRPDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNSKR 485
           ++S+           DS  LR   K+   S + +V  +G+    +  S+++ R       
Sbjct: 298 MRSTRLRHKNDKWTSDSGQLRMSMKNGNSSDTDRV--RGKEHGVKKRSKRETRSPKRHSA 355

Query: 486 RRDR 497
           ++ +
Sbjct: 356 KKSK 359


>ref|XP_004305637.1| PREDICTED: uncharacterized protein LOC101293998 [Fragaria vesca
           subsp. vesca]
          Length = 619

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
 Frame = +3

Query: 18  DGQMEFDRYDPNFVDKSDEEYEVRGLE-DLAGS------QSAGISLDKNRLLNP-DDKRG 173
           D ++ FDRY+P   ++ ++++E R +E    GS      ++A I    +  LN  +D + 
Sbjct: 175 DHEVGFDRYEPCRSNEGEDDHETRQMEYSGCGSVPQRPQENARILKTGDTTLNRHNDLKS 234

Query: 174 QQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHDAKAKSEVRRADSRSGGRLQSSN-- 347
           Q  CF+CG+ GH++RDCP   +   K T       DA  K+    A+    G +   N  
Sbjct: 235 QNACFSCGDLGHKIRDCPRKYSSGRKPTGFDHRQDDAIGKTSKGEAELDRFGSMSWENLW 294

Query: 348 --RDSRSLRRPDKDLKPSHSGKVEIKGRRFP---AENESRKDMREDNNSKRRR 491
             +D+ S  R  K    S   ++ I     P   ++   R +M++    KR R
Sbjct: 295 LIKDTASGHRKSKWASDSGKSRMLINSGTSPVTVSKETDRTEMKDRGRKKRSR 347


>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
 Frame = +3

Query: 3   NNSDFDGQMEFDRYDP-NFVDKSDEEYEV-----------RGLEDLAGSQSAGISLDKNR 146
           N +  +  MEFDRY+P +  D+S+E   +           R  ++  G +  G ++    
Sbjct: 174 NGNGLENGMEFDRYEPYHGEDRSNEXDNIQMTYSGGSPTLRSTQEKTGREQIGDAI---- 229

Query: 147 LLNPDDKRGQQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHD-----AKAKSEVRRA 311
           LL  +  + Q  C++CG  GH+MR+C    A Q+K +      +D          E+ R 
Sbjct: 230 LLPSNIPKPQLXCYHCGRPGHKMRNCLQGNASQKKFSRFDLKRNDEINLRGSGGGELPRT 289

Query: 312 DSRSGGRLQSSNRDSRSLRRPDKDLKPSHSGKVE--IKGRRFPAENESRKDMREDNNSKR 485
            S+   +  S +RD+ SLR    D K S SGK    I+     A  ES +   ++   K+
Sbjct: 290 GSKPHEKGHSGSRDTISLRWHTNDRKASGSGKYRRLIRSGSSAARKESHRTQGKEYGGKK 349

Query: 486 R 488
           +
Sbjct: 350 Q 350


>ref|XP_006481552.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
           [Citrus sinensis]
          Length = 685

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
 Frame = +3

Query: 3   NNSDFDGQMEFDRYDPNFVDKSDEEYEVRGLEDLAGS---QSAGISLDKNRL----LNPD 161
           N +  +  ME DRY+        +E+++  +    GS   QS+   L +  L    L+P 
Sbjct: 176 NGNSIENGMELDRYESYRGSDRRDEHKIHHIAYSDGSHVPQSSQDVLTRGHLSEAPLDPS 235

Query: 162 DKRGQQI-CFNCGNSGHRMRDCPLDEAFQEK-----STYHSDHSHDAKAKSEVRRADSRS 323
           +    Q+ C++CG SGH+MR+CP     Q K       +  D     +A+S + R ++ S
Sbjct: 236 NHSKPQLTCYSCGGSGHKMRNCPRQITSQRKFKRLGHRHDDDIKRSCRAESNLERYEAGS 295

Query: 324 GGRLQSSNRDSRSLRRPDKDLKPSHSGKVE--IKGRRFPAENESRKDMREDNNSKRRRD 494
             R Q   RDS S+     + K S SG+ +  IK R      E  +  ++    KRRR+
Sbjct: 296 -QREQRPYRDSISVSGLGDEGKASGSGRHQRLIKNRSSSEAKEGVRARKDHEVKKRRRN 353


>ref|XP_006430105.1| hypothetical protein CICLE_v10011213mg [Citrus clementina]
           gi|557532162|gb|ESR43345.1| hypothetical protein
           CICLE_v10011213mg [Citrus clementina]
          Length = 685

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
 Frame = +3

Query: 3   NNSDFDGQMEFDRYDPNFVDKSDEEYEVRGLEDLAGS---QSAGISLDKNRL----LNPD 161
           N +  +  ME DRY+        +E+++  +    GS   QS+   L +  L    L+P 
Sbjct: 176 NGNSIENGMELDRYECYRGSDRRDEHKIHHIAYSDGSHVQQSSQDVLTRGHLSEAPLDPS 235

Query: 162 DKRGQQI-CFNCGNSGHRMRDCPLDEAFQEK-----STYHSDHSHDAKAKSEVRRADSRS 323
           +    Q+ C++CG SGH+MR+CP     Q K       +  D     +A+S + R ++ S
Sbjct: 236 NHSKPQLTCYSCGGSGHKMRNCPRQITSQRKFKRLGHRHDDDIKRSCRAESNLERYEAGS 295

Query: 324 GGRLQSSNRDSRSLRRPDKDLKPSHSGKVE--IKGRRFPAENESRKDMREDNNSKRRRD 494
             R Q   RDS S+     + K S SG+ +  IK R      E  +  ++    KRRR+
Sbjct: 296 -QREQRPYRDSISVSGLGDEGKASGSGRHQRLIKNRSSSEAKEGVRARKDHEAKKRRRN 353


>ref|XP_001459079.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
           gi|124426902|emb|CAK91682.1| unnamed protein product
           [Paramecium tetraurelia]
          Length = 192

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +3

Query: 138 KNRLLNPDDKRGQQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHDAKAKSEVRRADS 317
           K+R   P D     +CF C   GH  RDCP   + +    Y +  S   + +S+ R   S
Sbjct: 81  KSRKTGPSDS---DLCFKCNKGGHWARDCPNGRSPRRSRRYSNSRSRRHRRRSDSRSYSS 137

Query: 318 RSGGRLQSSNRDSRSLRR----PDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNS 479
           +S  R +  NR SR+  R    P +  KP    K  I  +R P++++S K    D+ S
Sbjct: 138 QSSSRSRRRNRYSRNKHRHSRSPKRQDKPK---KRSISRKRSPSDSQSSKRANSDSKS 192


>ref|XP_001448617.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
           gi|124416172|emb|CAK81220.1| unnamed protein product
           [Paramecium tetraurelia]
          Length = 192

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +3

Query: 138 KNRLLNPDDKRGQQICFNCGNSGHRMRDCPLDEAFQEKSTYHSDHSHDAKAKSEVRRADS 317
           K+R   P D     +CF C   GH  RDCP   + +    Y +  S   + +S+ R   S
Sbjct: 81  KSRKTGPSDS---DLCFKCSKGGHWARDCPNGRSPRRSRRYSNSRSRRHRRRSDSRSYSS 137

Query: 318 RSGGRLQSSNRDSRSLRR----PDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNS 479
           +S  R +  NR SR+  R    P +  KP    K  I  +R P++++S K    D+ S
Sbjct: 138 QSSSRSRRRNRYSRNKHRHSRSPKRQDKPK---KRSISRKRSPSDSQSSKRANSDSKS 192


>ref|XP_006588853.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X1
           [Glycine max] gi|571482098|ref|XP_006588854.1|
           PREDICTED: serine/arginine-rich splicing factor 4-like
           isoform X2 [Glycine max]
          Length = 674

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
 Frame = +3

Query: 27  MEFDRYDPNFVDKSDEEYEVRGLEDLAGSQSAGISLDKNRLLNPDDK------RGQQICF 188
           +EFDRY+P        + E   +    GS +A    + +R L  D        + QQ CF
Sbjct: 185 IEFDRYEPYQCPDRKHDNEDYHVGYSGGSPAAHSQENVSRALGEDTSNCSNGSKFQQNCF 244

Query: 189 NCGNSGHRMRDCPLDEAFQEK---STYHSDHSHDAKAKSE-VRRADSRSGGRLQSSNRDS 356
            CG+ GH+MR+CP +   Q K        ++  D K KSE   + +S S  RLQSS  ++
Sbjct: 245 RCGDPGHKMRNCPKEHTSQRKYNSKIVQQNNKIDKKHKSEDENKFESDSLARLQSS-VEA 303

Query: 357 RSLRR--PDKDLKPSHSGKVEIKGRRFPAENESRKDMREDNNSKRR 488
            S+R     + L  S       +    P   E+ K  +++   K+R
Sbjct: 304 LSMRHQIDGRRLSGSRHHHAPRRNESSPVTRETDKHNKKEYGGKKR 349


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