BLASTX nr result
ID: Achyranthes23_contig00052103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes23_contig00052103 (299 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006478455.1| PREDICTED: RNA-binding protein 7-like [Citru... 57 2e-06 ref|XP_006466554.1| PREDICTED: splicing factor 3B subunit 4-like... 57 3e-06 ref|XP_006427003.1| hypothetical protein CICLE_v10027481mg [Citr... 57 3e-06 ref|XP_006466553.1| PREDICTED: splicing factor 3B subunit 4-like... 55 1e-05 >ref|XP_006478455.1| PREDICTED: RNA-binding protein 7-like [Citrus sinensis] Length = 189 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +3 Query: 27 LPPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155 LPPGV +++ + + + +YDYSRRVFGAT+DSI RSRSGRY Sbjct: 140 LPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRSRSGRY 182 >ref|XP_006466554.1| PREDICTED: splicing factor 3B subunit 4-like isoform X2 [Citrus sinensis] Length = 189 Score = 56.6 bits (135), Expect = 3e-06 Identities = 26/42 (61%), Positives = 33/42 (78%) Frame = +3 Query: 30 PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155 PPGV + + + +R + +YDYSRRVFGAT+DSI RSRSGRY Sbjct: 141 PPGVTLEINGYETRLNVTNYDYSRRVFGATLDSISRSRSGRY 182 >ref|XP_006427003.1| hypothetical protein CICLE_v10027481mg [Citrus clementina] gi|557528993|gb|ESR40243.1| hypothetical protein CICLE_v10027481mg [Citrus clementina] Length = 163 Score = 56.6 bits (135), Expect = 3e-06 Identities = 26/42 (61%), Positives = 33/42 (78%) Frame = +3 Query: 30 PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155 PPGV + + + +R + +YDYSRRVFGAT+DSI RSRSGRY Sbjct: 112 PPGVTLEINGYETRLNVTNYDYSRRVFGATLDSISRSRSGRY 153 >ref|XP_006466553.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Citrus sinensis] Length = 189 Score = 55.1 bits (131), Expect = 1e-05 Identities = 25/42 (59%), Positives = 32/42 (76%) Frame = +3 Query: 30 PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155 PPGV +T+ + + + +YDYSRRVFGAT+DSI RSRSG Y Sbjct: 141 PPGVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSGHY 182