BLASTX nr result

ID: Achyranthes23_contig00052103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00052103
         (299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006478455.1| PREDICTED: RNA-binding protein 7-like [Citru...    57   2e-06
ref|XP_006466554.1| PREDICTED: splicing factor 3B subunit 4-like...    57   3e-06
ref|XP_006427003.1| hypothetical protein CICLE_v10027481mg [Citr...    57   3e-06
ref|XP_006466553.1| PREDICTED: splicing factor 3B subunit 4-like...    55   1e-05

>ref|XP_006478455.1| PREDICTED: RNA-binding protein 7-like [Citrus sinensis]
          Length = 189

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 34/43 (79%)
 Frame = +3

Query: 27  LPPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155
           LPPGV  +++ + +  +  +YDYSRRVFGAT+DSI RSRSGRY
Sbjct: 140 LPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRSRSGRY 182


>ref|XP_006466554.1| PREDICTED: splicing factor 3B subunit 4-like isoform X2 [Citrus
           sinensis]
          Length = 189

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 30  PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155
           PPGV  + + + +R +  +YDYSRRVFGAT+DSI RSRSGRY
Sbjct: 141 PPGVTLEINGYETRLNVTNYDYSRRVFGATLDSISRSRSGRY 182


>ref|XP_006427003.1| hypothetical protein CICLE_v10027481mg [Citrus clementina]
           gi|557528993|gb|ESR40243.1| hypothetical protein
           CICLE_v10027481mg [Citrus clementina]
          Length = 163

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 30  PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155
           PPGV  + + + +R +  +YDYSRRVFGAT+DSI RSRSGRY
Sbjct: 112 PPGVTLEINGYETRLNVTNYDYSRRVFGATLDSISRSRSGRY 153


>ref|XP_006466553.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Citrus
           sinensis]
          Length = 189

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 30  PPGVGPDTSTFRSRQDDLSYDYSRRVFGATMDSIGRSRSGRY 155
           PPGV  +T+ + +  +  +YDYSRRVFGAT+DSI RSRSG Y
Sbjct: 141 PPGVTLETNGYETHLNVTNYDYSRRVFGATLDSISRSRSGHY 182


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