BLASTX nr result
ID: Achyranthes23_contig00050184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00050184
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 76 2e-24
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 76 2e-24
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 76 4e-24
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 74 6e-24
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 74 3e-23
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 73 4e-23
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 76 1e-22
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 68 2e-22
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 72 1e-20
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 63 1e-20
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 65 5e-20
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 70 8e-20
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 64 2e-19
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 68 3e-19
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 63 4e-19
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 60 9e-19
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 68 1e-18
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 62 3e-17
gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] 59 1e-16
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 55 8e-16
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 76.3 bits (186), Expect(2) = 2e-24
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP+SDNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 287 VSNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 341
Score = 62.0 bits (149), Expect(2) = 2e-24
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
D + LIG G RRDGLYYF G +VQ ++V S ELWH+R+GHPS++V+KL+P +
Sbjct: 228 DHTRELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV 287
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 75.9 bits (185), Expect(2) = 2e-24
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP+SDNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 201 VSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 255
Score = 62.0 bits (149), Expect(2) = 2e-24
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
D + LIG G RRDGLYYF G +VQ ++V S ELWH+R+GHPS++V+KL+P +
Sbjct: 142 DHTRELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV 201
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 75.9 bits (185), Expect(2) = 4e-24
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP+SDNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 414 VSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 468
Score = 61.2 bits (147), Expect(2) = 4e-24
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
LIG G RRDGLYYF G +VQ ++V S ELWH+R+GHPS++V+KL+P +
Sbjct: 360 LIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV 414
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 74.3 bits (181), Expect(2) = 6e-24
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP++DNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 534 VSNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYKHVSSCAA 588
Score = 62.0 bits (149), Expect(2) = 6e-24
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
D + LIG G RRDGLYYF G +VQ ++V S ELWH+R+GHPS++V+KL+P +
Sbjct: 475 DHTRELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV 534
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 73.6 bits (179), Expect(2) = 3e-23
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP+SDNKA+ IFE IHCDLW SY+ SSC A
Sbjct: 282 VSNIKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYKHVSSCGA 336
Score = 60.5 bits (145), Expect(2) = 3e-23
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVP 165
D + LIG G RRDGLYYF G +VQ ++V S ELWH R+GHPS++V+KL+P
Sbjct: 223 DHTRELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHNRMGHPSEKVVKLLP 280
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 72.8 bits (177), Expect(2) = 4e-23
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D F +SDNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 533 VSNLKGSLNKACEICFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSYKHVSSCGA 587
Score = 60.8 bits (146), Expect(2) = 4e-23
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
D + LIG G RRDGLYYF G +V+ ++V S ELWH+R+GHPS++V+KL+P +
Sbjct: 474 DHTRELIGTGVRRDGLYYFGGAEGDSVEHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV 533
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 75.9 bits (185), Expect(2) = 1e-22
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 195 ISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
+S+ K L+KAC IC +AK D FP+SDNKA+ IFE IHCDLWGSY+ SSC A
Sbjct: 246 VSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGA 300
Score = 55.8 bits (133), Expect(2) = 1e-22
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 DCSGNLIGAGERRDGLYYFRGIP--TVQAITVPRL-SEFELWHRRLGHPSDRVLKLVPDI 171
D + LI G RRDGLYYF G +VQ ++V S ELWH+R+ HPS++V+KL+P +
Sbjct: 187 DHTRELIRTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMRHPSEKVVKLLPPV 246
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 68.2 bits (165), Expect(2) = 2e-22
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +3
Query: 222 KACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
K C IC QAKQ D FP+S NK S FEL+HCDLWG YRT S C
Sbjct: 535 KTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSIC 578
Score = 63.2 bits (152), Expect(2) = 2e-22
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVP 165
LIGAG +GLY+FRG+ T A+T L +LWH+RLGHPS + L L+P
Sbjct: 474 LIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLP 523
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 71.6 bits (174), Expect(2) = 1e-20
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3
Query: 183 PTKFISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
P +S S L+KAC +C +AKQ +SFP+S NK IFELI+CDLWG YRTPS A
Sbjct: 408 PESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGA 466
Score = 53.9 bits (128), Expect(2) = 1e-20
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPD 168
++GAG R G ++FR ++TV +ELWH R+GHP+ RV+ L+P+
Sbjct: 359 VMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPE 409
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 63.2 bits (152), Expect(2) = 1e-20
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPDIPS 177
LIG GE+ +GLY+ +G+ ++A ++ +ELWHRR+GHPS RV+ L+ ++ S
Sbjct: 291 LIGVGEQCEGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDS 344
Score = 62.0 bits (149), Expect(2) = 1e-20
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +3
Query: 219 DKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
+K C IC +A+Q + F SDNKA F+LIHCDLWG+YR P+SC
Sbjct: 353 NKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPASC 397
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 65.5 bits (158), Expect(2) = 5e-20
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +3
Query: 222 KACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
K C IC +AKQ D FP+S+NK S FE++HCDLWG YRT S C
Sbjct: 499 KTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSIC 542
Score = 57.8 bits (138), Expect(2) = 5e-20
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRL-SEFELWHRRLGHPSDRVLKLV 162
LIGAG++++GLY+FRG TV ++T R+ S +LWH RLGHPS +VLKL+
Sbjct: 439 LIGAGKQQNGLYFFRGTETVASMT--RMDSSSQLWHCRLGHPSSKVLKLL 486
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 70.1 bits (170), Expect(2) = 8e-20
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +3
Query: 183 PTKFISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPS 347
P + +S K+ L+ C C +AKQ D+FP+SDN++ F+LIHCD+WG YRTPS
Sbjct: 308 PRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPS 362
Score = 52.4 bits (124), Expect(2) = 8e-20
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 22 GAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVP 165
G G+R +G + FRG+ A+ + F+LWHRRLGH SD+++ L+P
Sbjct: 261 GIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLP 308
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 63.5 bits (153), Expect(2) = 2e-19
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +3
Query: 222 KACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
++C +C +AKQ + FP+S NK+ F LIHCD+WG YR PSSC A
Sbjct: 119 RSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGA 164
Score = 57.4 bits (137), Expect(2) = 2e-19
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 7 SGNLIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPDIPSDS 183
S LIG+GE RDG+YY + T + T S+ LWH+RLGHPS VL +P + S S
Sbjct: 55 SRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSS 113
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 68.2 bits (165), Expect(2) = 3e-19
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 183 PTKFISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPS 347
P + +S K+ L+ C C +AKQ D+FP+ DN++ F+LIHCD+WG YRTPS
Sbjct: 308 PRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPS 362
Score = 52.4 bits (124), Expect(2) = 3e-19
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 22 GAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVP 165
G G+R +G + FRG+ A+ + F+LWHRRLGH SD+++ L+P
Sbjct: 261 GIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLP 308
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 62.8 bits (151), Expect(2) = 4e-19
Identities = 23/54 (42%), Positives = 41/54 (75%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPDIPS 177
LIGAGE+R+GLY+ +G+ ++A ++ +ELW+RR+GHPS +++ L+ ++ S
Sbjct: 384 LIGAGEQREGLYFLKGVTPIRAYKTTSIASYELWNRRMGHPSSKIVDLIYEVDS 437
Score = 57.4 bits (137), Expect(2) = 4e-19
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 219 DKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
+K C I +A+Q + F SDNKA F+LIHCDLWG+YR P+SC
Sbjct: 446 NKFCDIFFRAQQTREVFFSSDNKAKECFDLIHCDLWGAYRVPASC 490
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 60.1 bits (144), Expect(2) = 9e-19
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 219 DKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
+K C IC +A+Q + F SDNK F+LIHCDLWG+YR P+SC
Sbjct: 282 NKFCDICFRAQQTREVFFSSDNKVKECFDLIHCDLWGAYRVPTSC 326
Score = 58.9 bits (141), Expect(2) = 9e-19
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPDIPS 177
LIG G++ +GLY+ +G+ + A ++ +ELWHRR+GHPS RV+ L+ ++ S
Sbjct: 220 LIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDLIYEVDS 273
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 68.2 bits (165), Expect(2) = 1e-18
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 183 PTKFISDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPS 347
P + +S K+ L+ C C +AKQ D+FP+SDN++ F+LIHCD+WG YR PS
Sbjct: 532 PRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPS 586
Score = 50.4 bits (119), Expect(2) = 1e-18
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 28 GERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLVP 165
G+R +G + FRG+ A+ + F+LWHRRLGH SD+++ L+P
Sbjct: 487 GKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLP 532
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 62.0 bits (149), Expect(2) = 3e-17
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 198 SDSKKKLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSC 353
S S ++ K+C IC +AKQ + F S NK + FELIHCD+WG YRTP+SC
Sbjct: 526 SSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASC 577
Score = 52.0 bits (123), Expect(2) = 3e-17
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAIT-VPRLSEFELWHRRLGHPSDRVLKLVPDIPSDS 183
LIGAGE R+G+YYF G+ + S LWH RLGHPS VL P+ S S
Sbjct: 471 LIGAGEEREGVYYFTGVLAARVNKGFKESSSATLWHHRLGHPSTGVLLSFPEFASSS 527
>gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]
Length = 1158
Score = 58.5 bits (140), Expect(2) = 1e-16
Identities = 29/48 (60%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 189 KFISDSKKKLD-KACTICPQAKQHHDSFPISDNKASHIFELIHCDLWG 329
KF S D K C IC AKQ DSFP+S NK S FELIHCDLWG
Sbjct: 319 KFSDFSSSGFDSKDCEICISAKQTRDSFPLSSNKTSFAFELIHCDLWG 366
Score = 53.5 bits (127), Expect(2) = 1e-16
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGIPTVQAITVPRLSEFELWHRRLGHPSDRVLKLV 162
LIGAGE+ +GLY+FRG+ + + ++WHRRLGHPS + ++++
Sbjct: 270 LIGAGEQLNGLYFFRGLGVAAPVQHKDSTPIDVWHRRLGHPSSKAMEML 318
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 55.1 bits (131), Expect(2) = 8e-16
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 16 LIGAGERRDGLYYFRGI--PTVQAITVPRLSEFELWHRRLGHPSDRVLKLVPD 168
LIGAGE R+G+YYF G+ P V + +LWHRRLGHPS VL +P+
Sbjct: 467 LIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPE 519
Score = 53.9 bits (128), Expect(2) = 8e-16
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 213 KLDKACTICPQAKQHHDSFPISDNKASHIFELIHCDLWGSYRTPSSCDA 359
K+D +C C ++KQ + FPIS+NK F LIH D+WG YRTPS+ A
Sbjct: 529 KID-SCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGA 576