BLASTX nr result
ID: Achyranthes23_contig00049878
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Achyranthes23_contig00049878 (207 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABF97065.1| retrotransposon protein, putative, Ty1-copia subc... 57 3e-06 emb|CAN68365.1| hypothetical protein VITISV_018176 [Vitis vinifera] 56 6e-06 gb|ABA93936.1| retrotransposon protein, putative, unclassified, ... 55 7e-06 gb|ABA97697.1| retrotransposon protein, putative, unclassified [... 55 1e-05 emb|CAN69069.1| hypothetical protein VITISV_007586 [Vitis vinifera] 55 1e-05 >gb|ABF97065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1907 Score = 56.6 bits (135), Expect = 3e-06 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 14/71 (19%) Frame = +3 Query: 6 IHQQKYTKELLKKYNIEGSKVYHTPIQTNVKLDLDEE--------------GYADADYAT 143 I Q KY K++LKK+ +E +K HTP+ +N LDL+E+ GYADADYA Sbjct: 1293 ICQTKYLKDMLKKFGMENAKPIHTPMPSNGHLDLNEQGKDVDQKGARFDLIGYADADYAG 1352 Query: 144 ILVDQLST*GT 176 VD+ ST GT Sbjct: 1353 CKVDRKSTSGT 1363 >emb|CAN68365.1| hypothetical protein VITISV_018176 [Vitis vinifera] Length = 423 Score = 55.8 bits (133), Expect = 6e-06 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 15/73 (20%) Frame = +3 Query: 6 IHQQKYTKELLKKYNIEGSKVYHTPIQTNVKLDLDEE---------------GYADADYA 140 I+Q+KYT++LLK++N+E +K TPI +++KLD DE+ G++DAD+A Sbjct: 24 INQEKYTRDLLKRFNMEYAKTMKTPISSSIKLDKDEKYIGLWYPKSDNFELIGFSDADFA 83 Query: 141 TILVDQLST*GTH 179 V++ +T GT+ Sbjct: 84 XCRVERKNTSGTY 96 >gb|ABA93936.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1533 Score = 55.5 bits (132), Expect = 7e-06 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 14/71 (19%) Frame = +3 Query: 6 IHQQKYTKELLKKYNIEGSKVYHTPIQTNVKLDLDEE--------------GYADADYAT 143 I Q KY K++LKK+ +E +K TPI TN LDLDE GY+D+DYA Sbjct: 1327 ISQTKYVKDILKKFGMEDTKPIKTPIPTNGHLDLDENGKCVDQKGCDFELLGYSDSDYAG 1386 Query: 144 ILVDQLST*GT 176 VD+ ST GT Sbjct: 1387 CKVDRKSTTGT 1397 >gb|ABA97697.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1639 Score = 55.1 bits (131), Expect = 1e-05 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 9/66 (13%) Frame = +3 Query: 6 IHQQKYTKELLKKYNIEGSKVYHTPIQTNVKLDLDEE---------GYADADYATILVDQ 158 I Q KY K++LKK+ +E +K TP+ TN LDLD+ GY+D+DYA VD+ Sbjct: 1438 ISQTKYVKDILKKFGMEDAKPIKTPMPTNGHLDLDDNGKCVDQKLLGYSDSDYAGCKVDR 1497 Query: 159 LST*GT 176 ST GT Sbjct: 1498 KSTTGT 1503 >emb|CAN69069.1| hypothetical protein VITISV_007586 [Vitis vinifera] Length = 483 Score = 55.1 bits (131), Expect = 1e-05 Identities = 26/57 (45%), Positives = 43/57 (75%) Frame = +3 Query: 6 IHQQKYTKELLKKYNIEGSKVYHTPIQTNVKLDLDEEGYADADYATILVDQLST*GT 176 I+Q KY ++LLK++N+E +K TP+ +++KLD+DE+ DAD+A+ V++ ST GT Sbjct: 73 INQAKYIRDLLKRFNMEEAKTMKTPMSSSIKLDMDEK---DADFASCKVERKSTSGT 126