BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00049459
         (266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      169   5e-40
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]   140   2e-31
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   139   4e-31
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002334173.1| predicted protein [Populus trichocarpa]           135   6e-30
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   135   6e-30
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   134   1e-29
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...   132   4e-29
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   131   8e-29
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   127   1e-27
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   127   1e-27
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr...   126   3e-27
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   126   3e-27
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   125   4e-27
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   125   8e-27
emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana]    122   6e-26
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...   122   6e-26
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...   122   6e-26
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal...   122   6e-26
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   122   6e-26

>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  169 bits (427), Expect = 5e-40
 Identities = 83/88 (94%), Positives = 87/88 (98%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EMR+KKLAPNLPQVKALFLGWFEPLKKAIEKEQK QRSRKQ+AIYGYHIDMLPADKMAVI
Sbjct: 182 EMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYHIDMLPADKMAVI 241

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM+LLMVGN+AGCVRLVQAALQIG
Sbjct: 242 VMHKMMSLLMVGNDAGCVRLVQAALQIG 269


>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
          Length = 1312

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/88 (76%), Positives = 80/88 (90%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM EKKLAPNLP VKALFLGWFEPL++AIEKEQ+ QR++KQ+A Y  HI++LPADKMAVI
Sbjct: 171 EMCEKKLAPNLPYVKALFLGWFEPLREAIEKEQRAQRTKKQKAAYAPHIELLPADKMAVI 230

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+M+G+E GCVR+VQAA+QIG
Sbjct: 231 VMHKMMGLVMMGHEEGCVRVVQAAVQIG 258


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/88 (75%), Positives = 80/88 (90%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM EKKLAPNLP VKALFLGWFEPL++AI+KEQ+ QR++KQ+A Y  HI++LPADKMAVI
Sbjct: 171 EMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVI 230

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+M+G+E GCVR+VQAA+QIG
Sbjct: 231 VMHKMMGLVMMGHEEGCVRVVQAAVQIG 258


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  137 bits (345), Expect = 1e-30
 Identities = 65/87 (74%), Positives = 79/87 (90%)
 Frame = +2

Query: 5   MREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVIV 184
           M EKKLAPNLP VKALFLGWFEPL++AI+KEQ+ QR++KQ+A Y  HI++LPADKMAVIV
Sbjct: 1   MCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIV 60

Query: 185 MHKMMALLMVGNEAGCVRLVQAALQIG 265
           MHKMM L+M+G+E GCVR+VQAA+QIG
Sbjct: 61  MHKMMGLVMMGHEEGCVRVVQAAVQIG 87


>ref|XP_002334173.1| predicted protein [Populus trichocarpa]
          Length = 160

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/88 (72%), Positives = 81/88 (92%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM E+KLAPNLP VK+LFLGWFEPLK+AIE+EQKL++S+KQ++ +  +I++LPADKMAVI
Sbjct: 67  EMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVI 126

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+MVG+E GCVR+VQAA+QIG
Sbjct: 127 VMHKMMGLVMVGHEDGCVRVVQAAVQIG 154


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
           gi|222854390|gb|EEE91937.1| hypothetical protein
           POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/88 (72%), Positives = 81/88 (92%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM E+KLAPNLP VK+LFLGWFEPLK+AIE+EQKL++S+KQ++ +  +I++LPADKMAVI
Sbjct: 173 EMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVI 232

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+MVG+E GCVR+VQAA+QIG
Sbjct: 233 VMHKMMGLVMVGHEDGCVRVVQAAVQIG 260


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 882

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/88 (72%), Positives = 79/88 (89%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM E+KLAPNLP VK L LGWFEPLK+AIEKEQK+++S+KQ++ +  +I++LPADKMAVI
Sbjct: 73  EMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVI 132

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM LLMVG+E GCVR+VQAA+QIG
Sbjct: 133 VMHKMMGLLMVGHEDGCVRVVQAAVQIG 160


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  132 bits (333), Expect = 4e-29
 Identities = 62/87 (71%), Positives = 77/87 (88%)
 Frame = +2

Query: 5   MREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVIV 184
           MREKKLAPNLP VKALFLGWFEPL++AI +EQK Q+++K +A +  HID+LPADKMA+IV
Sbjct: 168 MREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIV 227

Query: 185 MHKMMALLMVGNEAGCVRLVQAALQIG 265
           MHKMM L+MVGN+ GCV++VQAA+ IG
Sbjct: 228 MHKMMGLVMVGNQDGCVQVVQAAVHIG 254


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  131 bits (330), Expect = 8e-29
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM E+KLAPNLP VK LFLGWFEPLK+ I+ EQ LQRS+K +A +  HI++LPADKMAVI
Sbjct: 178 EMCERKLAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIELLPADKMAVI 237

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKM+ LLMVG+E GCV LVQAA+QIG
Sbjct: 238 VMHKMVGLLMVGHEDGCVPLVQAAVQIG 265


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  127 bits (320), Expect = 1e-27
 Identities = 59/87 (67%), Positives = 76/87 (87%)
 Frame = +2

Query: 5   MREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVIV 184
           MREKKLAP+LP VKALFLGWFEPL++AI KEQK Q+++K +  +  HID+LPADKMA+IV
Sbjct: 165 MREKKLAPSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIV 224

Query: 185 MHKMMALLMVGNEAGCVRLVQAALQIG 265
           MHK+M L+M+GN+ GCV++VQAA+ IG
Sbjct: 225 MHKLMGLVMMGNQDGCVQVVQAAVHIG 251


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  127 bits (320), Expect = 1e-27
 Identities = 63/88 (71%), Positives = 75/88 (85%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM EKKLAPNLP VK LFLGWFEPLK AIE+EQK QRS+KQ+A +  HI++L ADKMAVI
Sbjct: 168 EMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVI 227

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VM+KMM LLM+  + GCV++VQAA+QIG
Sbjct: 228 VMYKMMGLLMMAAQDGCVQVVQAAVQIG 255


>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556793|gb|ESR66807.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 986

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/88 (67%), Positives = 75/88 (85%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           +M EK+LAPNLP +K LFLGWF PL +AIE+EQK+QR++KQ+A Y  HI++LPADKMAVI
Sbjct: 203 KMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVI 262

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+M G+E  CV++VQAA+ IG
Sbjct: 263 VMHKMMGLVMAGHEDRCVQVVQAAVHIG 290


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556792|gb|ESR66806.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/88 (67%), Positives = 75/88 (85%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           +M EK+LAPNLP +K LFLGWF PL +AIE+EQK+QR++KQ+A Y  HI++LPADKMAVI
Sbjct: 203 KMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAVI 262

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+M G+E  CV++VQAA+ IG
Sbjct: 263 VMHKMMGLVMAGHEDRCVQVVQAAVHIG 290


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Citrus sinensis]
          Length = 1009

 Score =  125 bits (315), Expect = 4e-27
 Identities = 58/88 (65%), Positives = 76/88 (86%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           +M EK+LAPNLP +K LFLGWF PL++AIE+EQK+QR++KQ+A Y  HI++LPADK+AVI
Sbjct: 200 KMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADKVAVI 259

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VMHKMM L+M G+E  CV++VQAA+ IG
Sbjct: 260 VMHKMMGLVMAGHEDRCVQVVQAAVHIG 287


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/88 (70%), Positives = 74/88 (84%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQQAIYGYHIDMLPADKMAVI 181
           EM EKKLAPNLP VK LFLGWFEPLK AIE+EQK QRS+KQ+A +  HI++L ADKMA I
Sbjct: 168 EMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAGI 227

Query: 182 VMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VM+KMM LLM+  + GCV++VQAA+QIG
Sbjct: 228 VMYKMMGLLMMAAQDGCVQVVQAAVQIG 255


>emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
          Length = 282

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQR--SRKQQAIYGYHIDMLPADKMA 175
           EM EK LAPNLP VK +FLGWF+PLK  IE+EQKLQ+  S+K +A Y  HI++LPADKMA
Sbjct: 187 EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 246

Query: 176 VIVMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VIVMHKMM L+M G+E GC+++VQAA+ IG
Sbjct: 247 VIVMHKMMGLVMSGHEDGCIQVVQAAVSIG 276


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
           gi|557106040|gb|ESQ46365.1| hypothetical protein
           EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQR--SRKQQAIYGYHIDMLPADKMA 175
           EM EK LAPNLP VK +FLGWF+PLK  IE+EQKLQ+  S+K +A Y  HI++LPADKMA
Sbjct: 187 EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 246

Query: 176 VIVMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VIVMHKMM L+M G+E GC+++VQAA+ IG
Sbjct: 247 VIVMHKMMGLVMSGHEDGCIQVVQAAVSIG 276


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
           gi|482564829|gb|EOA29019.1| hypothetical protein
           CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQR--SRKQQAIYGYHIDMLPADKMA 175
           EM EK LAPNLP VK +FLGWF+PLK  IE+EQKLQ+  S+K +A Y  HI++LPADKMA
Sbjct: 185 EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 244

Query: 176 VIVMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VIVMHKMM L+M G+E GC+++VQAA+ IG
Sbjct: 245 VIVMHKMMGLVMSGHEDGCIQVVQAAVSIG 274


>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase
           3 [Arabidopsis thaliana]
          Length = 895

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQR--SRKQQAIYGYHIDMLPADKMA 175
           EM EK LAPNLP VK +FLGWF+PLK  IE+EQKLQ+  S+K +A Y  HI++LPADKMA
Sbjct: 187 EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 246

Query: 176 VIVMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VIVMHKMM L+M G+E GC+++VQAA+ IG
Sbjct: 247 VIVMHKMMGLVMSGHEDGCIQVVQAAVSIG 276


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
           Full=DNA-directed RNA polymerase 3, chloroplastic;
           Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|2330564|emb|CAA69717.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
           subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|110739160|dbj|BAF01496.1| chloroplast
           single subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   EMREKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQR--SRKQQAIYGYHIDMLPADKMA 175
           EM EK LAPNLP VK +FLGWF+PLK  IE+EQKLQ+  S+K +A Y  HI++LPADKMA
Sbjct: 187 EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 246

Query: 176 VIVMHKMMALLMVGNEAGCVRLVQAALQIG 265
           VIVMHKMM L+M G+E GC+++VQAA+ IG
Sbjct: 247 VIVMHKMMGLVMSGHEDGCIQVVQAAVSIG 276