BLASTX nr result

ID: Achyranthes23_contig00049355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00049355
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...    63   4e-08
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]    58   1e-06
ref|XP_006347252.1| PREDICTED: sister chromatid cohesion 1 prote...    56   4e-06
ref|XP_002312177.1| hypothetical protein POPTR_0008s07230g [Popu...    55   7e-06

>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/118 (34%), Positives = 56/118 (47%)
 Frame = -2

Query: 357 SFPSSGLGLDFLSNNSDSYSGRLXXXXXXXXXXXSAGLESLAEENQWIYEAAEVEHNLRA 178
           S PSSG G    S+ S+ +S R             + LE + EEN W +           
Sbjct: 455 SIPSSGSGHGMPSHQSEVHSAR--KRPYSGSRHSGSSLEPVEEENSWQFP---------- 502

Query: 177 SGERSQPSFKMPKRSRHGSTPDHELLVETGITQTQRAAKDEEVERMASNITMHLKTYF 4
                 P+FK+ + S    TPD ELLVETG TQTQ+   +  V++M   I M +KT+F
Sbjct: 503 -----DPNFKLARLSEKDLTPDQELLVETGPTQTQKPIINPPVDKMTDTIRMQMKTHF 555


>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/119 (33%), Positives = 56/119 (47%)
 Frame = -2

Query: 357 SFPSSGLGLDFLSNNSDSYSGRLXXXXXXXXXXXSAGLESLAEENQWIYEAAEVEHNLRA 178
           SFP S  G    S+ S+  SGR             + LE + EE+ +             
Sbjct: 447 SFPGSASGHGSPSHTSEVNSGR----------HSGSSLEPVDEEHPF------------- 483

Query: 177 SGERSQPSFKMPKRSRHGSTPDHELLVETGITQTQRAAKDEEVERMASNITMHLKTYFN 1
               + P+FK+ K S     P+HELLVETG TQTQ       +E++  +I MHLKT+F+
Sbjct: 484 --NHTDPNFKLSKLSEDFMMPEHELLVETGPTQTQNPIIPPPIEKITDSIRMHLKTHFD 540


>ref|XP_006347252.1| PREDICTED: sister chromatid cohesion 1 protein 1-like [Solanum
           tuberosum]
          Length = 700

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
 Frame = -2

Query: 357 SFPSSGLGLDFLSNNSDSYSGRLXXXXXXXXXXXSA-GLESLAEENQWIYEAAEVEHNLR 181
           S PSSG G   LS NS + S R            S  GL+ +AEEN W            
Sbjct: 536 SIPSSGSGHGLLSQNSVTNSSRSNKKRPHSSSKHSGNGLQPVAEENPW------------ 583

Query: 180 ASGERSQPSFKMPKRSR---HGSTPDHELLVETGITQTQRAAKDEEVERMASNITMHLKT 10
                  P+FK+ + S    +G T D+E+L+ETG TQTQ     + ++ M  +I M LK+
Sbjct: 584 ---HDPTPNFKLTRLSELSENGFTQDNEILMETGPTQTQHPFITQPLDMMTDSIRMQLKS 640

Query: 9   YFN 1
           +F+
Sbjct: 641 HFD 643


>ref|XP_002312177.1| hypothetical protein POPTR_0008s07230g [Populus trichocarpa]
           gi|222851997|gb|EEE89544.1| hypothetical protein
           POPTR_0008s07230g [Populus trichocarpa]
          Length = 606

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/83 (34%), Positives = 47/83 (56%)
 Frame = -2

Query: 252 AGLESLAEENQWIYEAAEVEHNLRASGERSQPSFKMPKRSRHGSTPDHELLVETGITQTQ 73
           + LE++ EE+ W +               + P+F++ + S +G TPD ELLVET  TQTQ
Sbjct: 480 SSLETVVEEDPWRF---------------ADPNFELSRLSENGPTPDQELLVETEPTQTQ 524

Query: 72  RAAKDEEVERMASNITMHLKTYF 4
                + V+++A +I M +KT+F
Sbjct: 525 HHVVGQPVDKIADSIRMQMKTHF 547


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