BLASTX nr result

ID: Achyranthes23_contig00049312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00049312
         (470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB56439.1| putative CRM domain-containing protein [Morus not...    59   7e-10
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      55   2e-09
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    55   5e-09
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]                  55   1e-08
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    54   1e-08
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    59   7e-07
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...    50   2e-06
gb|EMS66157.1| Arginyl-tRNA synthetase, cytoplasmic [Triticum ur...    57   3e-06
gb|EXC31207.1| DNA ligase 4 [Morus notabilis]                          45   5e-06
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    45   5e-06
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    55   1e-05
gb|EMS57362.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    55   1e-05

>gb|EXB56439.1| putative CRM domain-containing protein [Morus notabilis]
          Length = 506

 Score = 58.5 bits (140), Expect(2) = 7e-10
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           + +  LWW + K+G+  +YI +++D+Y  V  + RT  G T  FP+++       + P+ 
Sbjct: 167 VPREVLWWVLEKRGVHVRYIKVIKDMYDRVVTSVRTAGGYTAEFPIRIGLNQGSALSPYL 226

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I   V WCML AD
Sbjct: 227 FTIVMDELTREIQDRVPWCMLFAD 250



 Score = 30.4 bits (67), Expect(2) = 7e-10
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 124 VFIDFEKGYDKLPREV 171
           VFID EK YD++PREV
Sbjct: 156 VFIDLEKAYDRVPREV 171


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           I +  +WWA+ K  +  KYI +++D+Y  V  + RT +  T  FP+++       + P+ 
Sbjct: 135 IPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYL 194

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I G++ WCML AD
Sbjct: 195 FALVMDEVTRDIQGDIPWCMLFAD 218



 Score = 31.6 bits (70), Expect(2) = 2e-09
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 12/38 (31%)
 Frame = +1

Query: 94  EAIHLMRQ------------NKVFIDFEKGYDKLPREV 171
           EAI L+RQ            + VFID EK YDK+PR V
Sbjct: 102 EAIFLVRQLMERYREQKKDLHMVFIDLEKSYDKIPRNV 139


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 55.5 bits (132), Expect(2) = 5e-09
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           I +  +WWA+ K  +  KYI +++D+Y  V  + RT +  T  FP+++       + P+ 
Sbjct: 180 IPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYL 239

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I G++ WCML AD
Sbjct: 240 FALVMDEVTRDIQGDIPWCMLFAD 263



 Score = 30.4 bits (67), Expect(2) = 5e-09
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 91  NEAIHLMRQNKVFIDFEKGYDKLPREV 171
           N+ +H+     VFID EK YDK+PR V
Sbjct: 163 NKDLHM-----VFIDLEKAYDKIPRNV 184


>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
          Length = 589

 Score = 54.7 bits (130), Expect(2) = 1e-08
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           I +  +WWA+ K  +  KYI +++D+Y  V  + RT    T  FP+++       + P+ 
Sbjct: 423 IPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSNVDTDDFPIKIGLHQGSALSPYL 482

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I G++ WCML AD
Sbjct: 483 FALVMDEVTRDIQGDIPWCMLFAD 506



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 124 VFIDFEKGYDKLPREV 171
           VFID EK YDK+PR V
Sbjct: 412 VFIDLEKAYDKIPRNV 427


>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 3154

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
 Frame = +3

Query: 171  LWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF---PIC 323
            +WWA+ K  +  KYI +++D+Y  V  + RT +  T  FP+++       + P+    + 
Sbjct: 2213 MWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALVM 2272

Query: 324  DEIKHSI*GEVHWCMLLAD 380
            DE+   I G++ WCML AD
Sbjct: 2273 DEVTRDIQGDIPWCMLFAD 2291



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 124  VFIDFEKGYDKLPREV 171
            VFID EK YDK+PR V
Sbjct: 2197 VFIDLEKAYDKMPRNV 2212


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           I +  +WWA+ K  +  KYI +++D+Y  V  + RT +G T  FP+++       + P+ 
Sbjct: 230 IPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYL 289

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I G++ WCML AD
Sbjct: 290 FDLVMDEVTRDIQGDIPWCMLFAD 313


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
           chalumnae]
          Length = 1500

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
 Frame = +3

Query: 171 LWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF---PIC 323
           +WW M K+GI   YI +V+D+Y   KI  R+  G T  FP+++       + PF    + 
Sbjct: 518 IWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGSALSPFLFILVL 577

Query: 324 DEIKHSI*GEVHWCMLLADCI 386
           D +   I  E  WCML AD I
Sbjct: 578 DTLTKDIQKEPPWCMLFADDI 598



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 124 VFIDFEKGYDKLPR 165
           VF+D EK YD++PR
Sbjct: 502 VFVDLEKAYDRVPR 515


>gb|EMS66157.1| Arginyl-tRNA synthetase, cytoplasmic [Triticum urartu]
          Length = 544

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
 Frame = +3

Query: 171 LWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF---PIC 323
           +WWA+ K  +  KYI +++DIY  V  + RT +  T  FP+++       + P+    + 
Sbjct: 426 MWWALEKHKVPAKYITLIKDIYDNVVTSVRTSDVDTADFPIKIGLHQGSALSPYLFALVM 485

Query: 324 DEIKHSI*GEVHWCMLLAD 380
           DE+   I G++ WCML AD
Sbjct: 486 DEVTRDIQGDIPWCMLFAD 504


>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
          Length = 627

 Score = 45.4 bits (106), Expect(2) = 5e-06
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL 299
           + +  LWW + K+G+  +YI +++D+Y  V  + RT  G T  FP+++
Sbjct: 558 VPREVLWWVLEKRGVRVRYIKVIKDMYDGVVTSVRTVGGYTTEFPIRI 605



 Score = 30.4 bits (67), Expect(2) = 5e-06
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 124 VFIDFEKGYDKLPREV 171
           VFID EK YD++PREV
Sbjct: 547 VFIDLEKAYDRVPREV 562


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 45.4 bits (106), Expect(2) = 5e-06
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPL 293
           + +  LWW + KKG+  +YI +++D+Y  V  + RT  G T  FP+
Sbjct: 320 VPREVLWWVLEKKGVHVRYIKVIKDMYDGVVTSVRTVGGYTAKFPI 365



 Score = 30.4 bits (67), Expect(2) = 5e-06
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 124 VFIDFEKGYDKLPREV 171
           VFID EK YD++PREV
Sbjct: 309 VFIDLEKAYDRVPREV 324


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
 Frame = +3

Query: 165 RSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF---P 317
           R+LWWA+ K  +  KYI +++D+Y     + RT +  T  FP+++       + P+    
Sbjct: 467 RNLWWALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQGSALSPYLFAL 526

Query: 318 ICDEIKHSI*GEVHWCMLLAD 380
           + DE+   I G++ WCML AD
Sbjct: 527 LMDEVTRDIQGDIPWCMLFAD 547


>gb|EMS57362.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 643

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
 Frame = +3

Query: 156 ITKRSLWWAMTKKGILCKYIDIVQDIYGEVKINARTCEGVTVLFPLQL------VIEPF- 314
           I +  +WWA+ K  +  KYI +++D+Y  V  + RT +  T  FP+++       + P+ 
Sbjct: 379 IPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYL 438

Query: 315 --PICDEIKHSI*GEVHWCMLLAD 380
              + DE+   I G++ WCML AD
Sbjct: 439 FALVMDEVTRDIQGDIPWCMLFAD 462


Top