BLASTX nr result

ID: Achyranthes23_contig00047423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00047423
         (241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Caps...    59   9e-07
ref|XP_006468012.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006449054.1| hypothetical protein CICLE_v10015479mg [Citr...    57   3e-06
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar...    56   4e-06
ref|XP_002886503.1| pentatricopeptide repeat-containing protein ...    56   4e-06

>ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Capsella rubella]
           gi|482571041|gb|EOA35229.1| hypothetical protein
           CARUB_v10020389mg [Capsella rubella]
          Length = 408

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/59 (59%), Positives = 41/59 (69%)
 Frame = +3

Query: 63  SMALFSRFRARPNITILRLYSSFPSAILSADSKTVLSSRDKSRAALSLLKSEKNPEKIL 239
           S +LF    A P I  L    S  S ILS DSKT L+SR+KSRAALSLLKSEK+P++IL
Sbjct: 10  STSLFRHLNASPQIRSL----SSASTILSPDSKTPLTSREKSRAALSLLKSEKDPDRIL 64


>ref|XP_006468012.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Citrus sinensis]
          Length = 402

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = +3

Query: 66  MALFSRFRARPNITILRLYSSFP-SAILSADSKTVLSSRDKSRAALSLLKSEKNPEKIL 239
           MALFSR R   N+   + +     S+ILS+  KT L+S+DK+RAAL+LLKSE NPEKIL
Sbjct: 1   MALFSRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKIL 59


>ref|XP_006449054.1| hypothetical protein CICLE_v10015479mg [Citrus clementina]
           gi|557551665|gb|ESR62294.1| hypothetical protein
           CICLE_v10015479mg [Citrus clementina]
          Length = 402

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = +3

Query: 66  MALFSRFRARPNITILRLYSSFP-SAILSADSKTVLSSRDKSRAALSLLKSEKNPEKIL 239
           MALFSR R   N+   + +     S+ILS+  KT L+S+DK+RAAL+LLKSE NPEKIL
Sbjct: 1   MALFSRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKIL 59


>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g61870, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
           gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
           [Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
           to gb|U08285 membrane-associated salt-inducible protein
           from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
           come from this gene [Arabidopsis thaliana]
           gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
           thaliana] gi|32815835|gb|AAP88326.1| At1g61870
           [Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 408

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +3

Query: 63  SMALFSRFRARPNITILRLYSSFPSAILSADSKTVLSSRDKSRAALSLLKSEKNPEKIL 239
           S +LF    A P I  L    S  S ILS DSKT L+S++KS+AALSLLKSEK+P++IL
Sbjct: 10  STSLFRHLNASPQIRSL----SSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRIL 64


>ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332344|gb|EFH62762.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 408

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +3

Query: 63  SMALFSRFRARPNITILRLYSSFPSAILSADSKTVLSSRDKSRAALSLLKSEKNPEKIL 239
           S +LF    A P I  L    S  S ILS DSKT L+S++KS+AALSLLKSEK+P++IL
Sbjct: 10  STSLFRHLNASPQIRSL----SSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRIL 64


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