BLASTX nr result

ID: Achyranthes23_contig00047333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00047333
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP96757.1| chloroplast small heat shock protein [Amaranthus ...    79   6e-13
gb|AEF28143.1| chloroplast low molecular weight heat shock prote...    70   2e-10
gb|AEM05963.1| chloroplast low molecular weight heat shock prote...    70   4e-10
gb|AFZ94855.1| chloroplast small heat shock protein [Chenopodium...    68   1e-09
gb|AEM05965.1| chloroplast low molecular weight heat shock prote...    67   2e-09

>gb|AFP96757.1| chloroplast small heat shock protein [Amaranthus retroflexus]
          Length = 238

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = +1

Query: 49  MASKAIQCGVTSSPIISSRAYSKQGGLGPCLVGFPVPKR-GLKSRMVVKAQQASGENKEG 225
           MAS A+ CG   SPI+S+ +  K G LGPC V FP PK+  ++SRM V+AQQA GENKEG
Sbjct: 1   MASNALNCGAICSPIVSNTSCRKLGSLGPCSVTFPAPKQASVQSRMAVRAQQAGGENKEG 60

Query: 226 GHRNNVDVQVHK 261
            H  +VDV V K
Sbjct: 61  SH--HVDVHVQK 70


>gb|AEF28143.1| chloroplast low molecular weight heat shock protein HSP26.26m
           [Chenopodium album] gi|343198350|gb|AEM05964.1|
           chloroplast low molecular weight heat shock protein
           HSP26.23n [Chenopodium album]
          Length = 235

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
 Frame = +1

Query: 49  MASKAIQCGVTS-SPIISSRAYS-KQGGLGPCLVGFPVPKR-GLKSRMVVKAQQASGE-N 216
           MASK I C  +S +P++SS+  S K  GLGPC V FP PK+  L+SR+VVKAQQA GE N
Sbjct: 1   MASKCITCSASSPAPLVSSKTTSSKLVGLGPCSVTFPAPKKPSLRSRLVVKAQQAGGEQN 60

Query: 217 KEGGHRNNVDVQ 252
           KEG H  +V VQ
Sbjct: 61  KEGSHHVDVQVQ 72


>gb|AEM05963.1| chloroplast low molecular weight heat shock protein HSP26.04m
           [Chenopodium album]
          Length = 235

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
 Frame = +1

Query: 49  MASKAI-QCGVTSS-PIISSR-AYSKQGGLGPCLVGFPVPKR-GLKSRMVVKAQQASGEN 216
           MASK I  C  +S+ P++SSR A SK  GLGPC V FP PK+  L SR++VKAQQ  GEN
Sbjct: 1   MASKGIITCSASSAAPLVSSRTASSKLVGLGPCSVAFPAPKKPSLGSRLMVKAQQGGGEN 60

Query: 217 KEGGHRNNVDVQ 252
           KEG H  +V VQ
Sbjct: 61  KEGSHHVDVQVQ 72


>gb|AFZ94855.1| chloroplast small heat shock protein [Chenopodium album]
          Length = 234

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
 Frame = +1

Query: 49  MASKAIQCGVTSS-PIISSRAYS-KQGGLGPCLVGFPVPKR-GLKSRMVVKAQQASGENK 219
           MASK I C  +S+ P++SSR  S K  GLGPC V FP PK+  L SR+VV+AQQ   +NK
Sbjct: 1   MASKGITCSASSAAPLVSSRTTSSKLVGLGPCSVTFPAPKKPSLGSRLVVRAQQGGEQNK 60

Query: 220 EGGHRNNVDVQ 252
           EG H  +V VQ
Sbjct: 61  EGSHHVDVQVQ 71


>gb|AEM05965.1| chloroplast low molecular weight heat shock protein HSP25.99n
           [Chenopodium album]
          Length = 229

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = +1

Query: 49  MASKAIQCGVTSS-PIISSRAYS-KQGGLGPCLVGFPVPKR-GLKSRMVVKAQQASGENK 219
           MASK I C  +S+ P++SSR  S K  GLGPC V FP PK+  L SR+VV+AQQ   +NK
Sbjct: 1   MASKGITCSASSAAPLVSSRTTSSKLVGLGPCSVTFPAPKKPSLGSRLVVRAQQGGEQNK 60

Query: 220 EGGHRNNVDVQV 255
           EG H   VDVQV
Sbjct: 61  EGSH---VDVQV 69


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