BLASTX nr result
ID: Achyranthes23_contig00047233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00047233
(351 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 111 1e-28
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera] 106 1e-26
emb|CBI35129.3| unnamed protein product [Vitis vinifera] 105 2e-26
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 107 2e-25
emb|CAN62009.1| hypothetical protein VITISV_021498 [Vitis vinifera] 97 4e-23
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 94 3e-22
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera] 92 7e-22
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera] 97 7e-22
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa] 95 2e-21
emb|CAN74443.1| hypothetical protein VITISV_031468 [Vitis vinifera] 94 2e-21
emb|CAN64234.1| hypothetical protein VITISV_039557 [Vitis vinifera] 94 1e-20
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 86 2e-20
emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera] 103 2e-20
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera] 93 1e-19
emb|CAN83853.1| hypothetical protein VITISV_030683 [Vitis vinifera] 91 2e-19
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 81 3e-19
emb|CAN65122.1| hypothetical protein VITISV_018226 [Vitis vinifera] 79 3e-18
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera] 96 5e-18
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 85 2e-17
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 85 2e-17
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 111 bits (277), Expect(2) = 1e-28
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
+K + KQ T IF DN IKLSKNP+ +GRSKHIDVK+YFLR+ NDG I+ +Y
Sbjct: 1188 RKILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFLRELSNDGVIDLVY 1247
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
CRSE+Q+ADIFTK LKL +F+KLR+LLG
Sbjct: 1248 CRSENQVADIFTKPLKLAAFLKLRKLLG 1275
Score = 41.2 bits (95), Expect(2) = 1e-28
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFVA TACAC I LR+ILEEL
Sbjct: 1170 TEAEFVAATACACQAIWLRKILEEL 1194
>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
Length = 808
Score = 106 bits (264), Expect(2) = 1e-26
Identities = 52/88 (59%), Positives = 66/88 (75%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
+K + KQ T IF DN IKLSKNP+ +GRSKHIDVK+YFLRD NDG I+ ++
Sbjct: 713 RKILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFLRDLSNDGVIDLVH 772
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
C+SE+Q+A IFTK LKL +F+KLR+LLG
Sbjct: 773 CKSENQVAYIFTKPLKLAAFLKLRKLLG 800
Score = 38.9 bits (89), Expect(2) = 1e-26
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE +FVA TACAC I LR+ILEEL
Sbjct: 695 TEAKFVATTACACQAIWLRKILEEL 719
>emb|CBI35129.3| unnamed protein product [Vitis vinifera]
Length = 947
Score = 105 bits (261), Expect(2) = 2e-26
Identities = 51/86 (59%), Positives = 64/86 (74%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
+K + KQ T IF DN IKLSKNP+ +GRSKHIDVK+YFLRD NDG I+ +Y
Sbjct: 363 RKILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFLRDLSNDGVIDLVY 422
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRL 312
CRSE+Q+ADIFTK LKL F++LR++
Sbjct: 423 CRSENQVADIFTKPLKLAVFLELRKV 448
Score = 39.7 bits (91), Expect(2) = 2e-26
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFVA T CAC I LR+ILEEL
Sbjct: 345 TEAEFVAATVCACQAIWLRKILEEL 369
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 107 bits (268), Expect(2) = 2e-25
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
+KN + KQ IF DN IKLSKNP+ +GRSKHIDVK+YFLR+ NDG I+ +Y
Sbjct: 1151 RKNLEELHLKQVGAITIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFLRELSNDGVIDLVY 1210
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
RSE+Q+ADIFTK LKL +F+KLR+LLG
Sbjct: 1211 RRSENQVADIFTKPLKLAAFLKLRKLLG 1238
Score = 33.5 bits (75), Expect(2) = 2e-25
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 5 EVEFVAGTACACHGICLRRILEEL 76
+ +FVA TACAC I LR+ LEEL
Sbjct: 1134 KAKFVAATACACQAIWLRKNLEEL 1157
>emb|CAN62009.1| hypothetical protein VITISV_021498 [Vitis vinifera]
Length = 547
Score = 97.4 bits (241), Expect(2) = 4e-23
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = +1
Query: 85 QQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIADI 264
Q T +F DN IKLSKNP+ +GRSKHIDV+F+FLRD +G +E ++C ++DQIAD+
Sbjct: 411 QGNCTIMFCDNSSTIKLSKNPMMHGRSKHIDVRFHFLRDLTKEGVVELVHCGTQDQIADV 470
Query: 265 FTKALKLNSFVKLRRLLG 318
TK LKLN F+KLR L+G
Sbjct: 471 MTKPLKLNMFLKLRELMG 488
Score = 36.2 bits (82), Expect(2) = 4e-23
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 5 EVEFVAGTACACHGICLRRILEEL 76
E EF+A T+CAC + +RRILE+L
Sbjct: 384 EAEFIAATSCACQAVWMRRILEKL 407
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 94.0 bits (232), Expect(2) = 3e-22
Identities = 42/88 (47%), Positives = 63/88 (71%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
++ G+ Q ++T ++ DN IKLSKN + +GR KHIDV F+FLR+ DG +E ++
Sbjct: 1243 RRILEGLNHAQHDSTTVYCDNSSTIKLSKNLVMHGRCKHIDVHFHFLRELTKDGTVEMVH 1302
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
C +++Q+ADI TK LKL++F+KLR LLG
Sbjct: 1303 CHTQEQVADIMTKPLKLDTFLKLRDLLG 1330
Score = 37.0 bits (84), Expect(2) = 3e-22
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEELD 79
TE EF+A T+C C I LRRILE L+
Sbjct: 1225 TEAEFIAATSCVCQAIWLRRILEGLN 1250
>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
Length = 1770
Score = 92.0 bits (227), Expect(2) = 7e-22
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1
Query: 85 QQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIADI 264
Q T +F DN IKLSKNP+ +GRSKHIDV F+FL D +G +E ++C ++DQIAD+
Sbjct: 223 QSNCTTVFCDNSSTIKLSKNPVMDGRSKHIDVHFHFLHDLTKEGVVELVHCGTQDQIADV 282
Query: 265 FTKALKLNSFVKLRRLLG 318
TK LKL+ F+ LR L+G
Sbjct: 283 MTKPLKLDMFLTLRELMG 300
Score = 37.4 bits (85), Expect(2) = 7e-22
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EF+A T+CAC I +RRIL++L
Sbjct: 195 TEAEFIAATSCACQAIWIRRILDKL 219
>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
Length = 1278
Score = 97.4 bits (241), Expect(2) = 7e-22
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +1
Query: 82 KQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIAD 261
+QQ T I+ DN AIKLSKN + +GRSKHIDV+++FLRD C DG I+ ++C+SEDQIAD
Sbjct: 1181 QQQGPTVIYCDNLSAIKLSKNLVLHGRSKHIDVRYHFLRDLCKDGVIDLVFCKSEDQIAD 1240
Query: 262 IFTKALKLNSFVKLRRLLG 318
I TK LK F+KLR +LG
Sbjct: 1241 ILTKPLKPVVFMKLRSMLG 1259
Score = 32.0 bits (71), Expect(2) = 7e-22
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TEVEFVA + +C I LRR+LE L
Sbjct: 1154 TEVEFVAXASSSCQAIWLRRLLEVL 1178
>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 95.1 bits (235), Expect(2) = 2e-21
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = +1
Query: 73 IGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQ 252
+G+ Q + +F DN IKLSKNP+F+GRSKHIDV+F+FLRD DG +E + S++Q
Sbjct: 1098 LGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVRFHFLRDLTKDGVVELKFYGSKEQ 1157
Query: 253 IADIFTKALKLNSFVKLRRLLG 318
IADI TK LK+ F KLR LLG
Sbjct: 1158 IADILTKPLKMERFEKLRELLG 1179
Score = 33.1 bits (74), Expect(2) = 2e-21
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEELDSS 85
TE E+VA CAC + +RR+L +L S
Sbjct: 1074 TEAEYVAAAGCACQSVWMRRVLNKLGYS 1101
>emb|CAN74443.1| hypothetical protein VITISV_031468 [Vitis vinifera]
Length = 147
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
K+ + +G + T + DN IKLSKNP+ +GR+KHIDV+F+FLR+ +G IE ++
Sbjct: 52 KRILKELGHLDEGCTTMMCDNSSTIKLSKNPIMHGRNKHIDVRFHFLRNLAKEGTIELVH 111
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
C S+DQ+ADI TK LKL F K R+LLG
Sbjct: 112 CGSQDQVADIMTKPLKLEVFQKFRKLLG 139
Score = 34.7 bits (78), Expect(2) = 2e-21
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 5 EVEFVAGTACACHGICLRRILEEL 76
E EFVA CAC G+ ++RIL+EL
Sbjct: 35 EAEFVATVVCACQGVWMKRILKEL 58
>emb|CAN64234.1| hypothetical protein VITISV_039557 [Vitis vinifera]
Length = 846
Score = 94.4 bits (233), Expect(2) = 1e-20
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = +1
Query: 82 KQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIAD 261
+QQ T I+ DN IKLSKN + +GRSKHIDV+++FLRD C DG I+ ++C+SEDQIA+
Sbjct: 752 QQQGPTVIYCDNLSVIKLSKNLVLHGRSKHIDVRYHFLRDLCKDGVIDLVFCKSEDQIAN 811
Query: 262 IFTKALKLNSFVKLRRLLG 318
I TK LK F+KLR +LG
Sbjct: 812 ILTKPLKPAVFMKLRSMLG 830
Score = 31.2 bits (69), Expect(2) = 1e-20
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEELDSSNK 91
TE EFVA + +C I LRR+LE L + +
Sbjct: 725 TEAEFVAAASSSCQAIWLRRLLEVLHNQQQ 754
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 85.9 bits (211), Expect(2) = 2e-20
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1
Query: 85 QQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIADI 264
Q + T + DN IKLSKNP+ +GRSKHIDV+F+FLRD DG E +C +++QIA I
Sbjct: 955 QGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDLTRDGVXELKHCVTQEQIAYI 1014
Query: 265 FTKALKLNSFVKLRRLLG 318
TK LKL+ F+KLR +G
Sbjct: 1015 MTKPLKLDVFLKLRESMG 1032
Score = 38.5 bits (88), Expect(2) = 2e-20
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFVA +CAC G+ +RR+LE+L
Sbjct: 927 TEAEFVAAASCACQGVWMRRVLEKL 951
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +1
Query: 37 LSWYLFKKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDG 216
L W L + +G T ++ DNQ AI ++ N +F+ R+KHI + +F+R G
Sbjct: 2314 LRWLL-----KDLGVSTSSATPLYCDNQSAIHIAHNDVFHERTKHIKIDCHFIRYHLVHG 2368
Query: 217 KIE*LYCRSEDQIADIFTKAL 279
++ + S+DQ+ADIFTK+L
Sbjct: 2369 ALKLFFVSSKDQLADIFTKSL 2389
>emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]
Length = 870
Score = 103 bits (257), Expect = 2e-20
Identities = 50/88 (56%), Positives = 65/88 (73%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
KK + + FK++ T+I+ DN AIKLSKNP+ +GRSKHIDVK++FLRD NDG I +Y
Sbjct: 777 KKILKELHFKEERPTQIYCDNSSAIKLSKNPVLHGRSKHIDVKYHFLRDLXNDGVINLIY 836
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
R+EDQI DI TK+LK +F K +LLG
Sbjct: 837 YRNEDQITDILTKSLKFPTFQKFGKLLG 864
>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
Length = 1202
Score = 92.8 bits (229), Expect(2) = 1e-19
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 82 KQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIAD 261
+QQ T I+ DN AIKLSKN + +GRSKHIDV+++FL D C DG I+ ++C+SEDQI D
Sbjct: 1107 QQQGPTVIYCDNLXAIKLSKNLVLHGRSKHIDVRYHFLCDLCKDGVIDLVFCKSEDQIXD 1166
Query: 262 IFTKALKLNSFVKLRRLLG 318
I TK LK F+KLR +LG
Sbjct: 1167 ILTKPLKPAVFMKLRSMLG 1185
Score = 28.9 bits (63), Expect(2) = 1e-19
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFV + +C I LRR+LE L
Sbjct: 1080 TEAEFVXAASSSCQAIWLRRLLEVL 1104
>emb|CAN83853.1| hypothetical protein VITISV_030683 [Vitis vinifera]
Length = 469
Score = 90.9 bits (224), Expect(2) = 2e-19
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
KK + + FK+ T+I+ DN I LSKNP+ +GRSKHIDVK++FLRD NDG I +Y
Sbjct: 390 KKIIKELHFKEDGPTQIYCDNGSTINLSKNPVLHGRSKHIDVKYHFLRDLTNDGVINLIY 449
Query: 235 CRSEDQIADIFTKALKLNSF 294
RSEDQ+ DI TK LK +F
Sbjct: 450 YRSEDQVIDILTKPLKFPTF 469
Score = 30.0 bits (66), Expect(2) = 2e-19
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 5 EVEFVAGTACACHGICLRRILEEL 76
E EFVA T CA I L++I++EL
Sbjct: 373 EAEFVAATTCAYQAIWLKKIIKEL 396
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 81.3 bits (199), Expect(2) = 3e-19
Identities = 36/78 (46%), Positives = 58/78 (74%)
Frame = +1
Query: 85 QQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQIADI 264
Q+E+T+I+ DN+ A +L+KNP+F+ RSKHID +++F+R+ ++E + +++DQ+ADI
Sbjct: 954 QKESTKIYVDNRSAQELAKNPVFHERSKHIDTRYHFIRECITKKEVELTHVKTQDQVADI 1013
Query: 265 FTKALKLNSFVKLRRLLG 318
FTK LK F +LR LG
Sbjct: 1014 FTKPLKFEDFRRLRARLG 1031
Score = 39.3 bits (90), Expect(2) = 3e-19
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 5 EVEFVAGTACACHGICLRRILEELDSSNK 91
E E+VA T+C CH I LRR+LEEL K
Sbjct: 927 EAEYVAATSCTCHAIWLRRLLEELQLLQK 955
>emb|CAN65122.1| hypothetical protein VITISV_018226 [Vitis vinifera]
Length = 789
Score = 79.0 bits (193), Expect(2) = 3e-18
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +1
Query: 73 IGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQ 252
+G Q + T + DN IKLSKN + +GRSKHIDV+F+FL D D +E +C + +Q
Sbjct: 700 LGHSQGKCTTVLCDNSSIIKLSKNLVMHGRSKHIDVRFHFLLDLTRDRVVELKHCVTHEQ 759
Query: 253 IADIFTKALKLNSFVKLRRLLG 318
+ +I TK LKL+ F+KLR +G
Sbjct: 760 VVNILTKPLKLDVFLKLRESMG 781
Score = 38.5 bits (88), Expect(2) = 3e-18
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEELDSS 85
TE+EF+A +CAC G+ +RR+LE+L S
Sbjct: 676 TEIEFMATASCACQGVWMRRVLEKLGHS 703
>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +1
Query: 55 KKNFRGIGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LY 234
K+ +G Q + T + DN IKLSKNP+ +GRSKHIDV+F+FLRD +G +E +
Sbjct: 989 KRVLEKLGHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDLTREGVVELKH 1048
Query: 235 CRSEDQIADIFTKALKLNSFVKLRRLLG 318
C +++Q+ADI TK LKL+ F+KLR LLG
Sbjct: 1049 CGTQEQVADIMTKPLKLDVFLKLRELLG 1076
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 85.1 bits (209), Expect(2) = 2e-17
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1
Query: 73 IGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQ 252
IG +Q+ T +F DN IKLSKNP+ +GRSKHI V+++FLR+ +G I YC + DQ
Sbjct: 1247 IGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQ 1306
Query: 253 IADIFTKALKLNSFVKLRRLLG 318
+ADI TKA+K F +LR +G
Sbjct: 1307 VADIMTKAVKREVFEELRGRMG 1328
Score = 29.3 bits (64), Expect(2) = 2e-17
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFV+ + AC + LR +LEE+
Sbjct: 1223 TEAEFVSASYGACQAVWLRNVLEEI 1247
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 85.1 bits (209), Expect(2) = 2e-17
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1
Query: 73 IGFKQQETTRIFYDNQCAIKLSKNPLFNGRSKHIDVKFYFLRDFCNDGKIE*LYCRSEDQ 252
IG +Q+ T +F DN IKLSKNP+ +GRSKHI V+++FLR+ +G I YC + DQ
Sbjct: 1247 IGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQ 1306
Query: 253 IADIFTKALKLNSFVKLRRLLG 318
+ADI TKA+K F +LR +G
Sbjct: 1307 VADIMTKAVKREVFEELRGRMG 1328
Score = 29.3 bits (64), Expect(2) = 2e-17
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 2 TEVEFVAGTACACHGICLRRILEEL 76
TE EFV+ + AC + LR +LEE+
Sbjct: 1223 TEAEFVSASYGACQAVWLRNVLEEI 1247