BLASTX nr result
ID: Achyranthes23_contig00046387
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00046387
(434 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 120 2e-27
emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera] 120 1e-25
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 109 6e-24
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 109 6e-24
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 109 6e-24
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 109 6e-24
emb|CBI21397.3| unnamed protein product [Vitis vinifera] 110 2e-23
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 107 3e-23
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 107 4e-23
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 106 7e-23
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 105 7e-23
gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao] 102 2e-22
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 105 2e-22
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 104 2e-21
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 104 2e-21
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 104 2e-21
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 104 2e-21
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 104 2e-21
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 104 2e-21
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 103 3e-21
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 120 bits (300), Expect(2) = 2e-27
Identities = 57/117 (48%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = -2
Query: 343 GHSNNGVYE-LSSLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKSFLHISVSCTS--NF 173
G + +GVYE L S PL AF+S ++ S HH+LGHP+ I+ + S ++++S +S +F
Sbjct: 337 GKTKDGVYEWLVSSPLLAFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLLHF 396
Query: 172 HCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSRY 2
C++C CNKSHKL F ST +S+ PLQ +++D+WTSP+ S DG+KYY+IFVD+F++Y
Sbjct: 397 SCNTCHCNKSHKLSFSNSTINSSRPLQILYSDVWTSPIISYDGFKYYVIFVDYFTKY 453
Score = 27.7 bits (60), Expect(2) = 2e-27
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSGKIII 346
+L I NNV I F P VKDL++G ++
Sbjct: 307 KLXISNNVSITFLPSSFLVKDLRTGATLL 335
>emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]
Length = 731
Score = 120 bits (302), Expect = 1e-25
Identities = 57/117 (48%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
Frame = -2
Query: 343 GHSNNGVYELS-SLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKSFLHISVSCTS--NF 173
G + +GVYE S PL AF+S ++ S HH+LGHP+ I+ + S ++++S +S +F
Sbjct: 261 GKTKDGVYEWPVSSPLLAFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLLHF 320
Query: 172 HCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSRY 2
C++C CNKSHKL F ST +S++PLQ +++D+WTSP+ S DG+KYY+IFVDHF++Y
Sbjct: 321 SCNACHCNKSHKLSFSNSTINSSHPLQILYSDVWTSPIISYDGFKYYVIFVDHFTKY 377
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 109 bits (272), Expect(2) = 6e-24
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL---SSLPLSAFASTTSNPS--T*HHKLGHPSSKIM-SLIKSF-LHISVSC 185
G + N +YE SS+ S FAS T + H +LGHPS I+ +LI F L IS S
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C+ NKSHKLPF+ +T +S++PL++++TD+WTSP+ SID YKYY++ VDH++R
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTR 556
Query: 4 Y 2
Y
Sbjct: 557 Y 557
Score = 26.9 bits (58), Expect(2) = 6e-24
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
R+C N V + F P H VKDL +G
Sbjct: 407 RMCNTNGVSVEFFPAHFQVKDLSTG 431
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 109 bits (272), Expect(2) = 6e-24
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL---SSLPLSAFASTTSNPS--T*HHKLGHPSSKIM-SLIKSF-LHISVSC 185
G + N +YE SS+ S FAS T + H +LGHPS I+ +LI F L IS S
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C+ NKSHKLPF+ +T +S++PL++++TD+WTSP+ SID YKYY++ VDH++R
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTR 556
Query: 4 Y 2
Y
Sbjct: 557 Y 557
Score = 26.9 bits (58), Expect(2) = 6e-24
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
R+C N V + F P H VKDL +G
Sbjct: 407 RMCNTNGVSVEFFPAHFQVKDLSTG 431
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 109 bits (272), Expect(2) = 6e-24
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL---SSLPLSAFASTTSNPS--T*HHKLGHPSSKIM-SLIKSF-LHISVSC 185
G + N +YE SS+ S FAS T + H +LGHPS I+ +LI F L IS S
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C+ NKSHKLPF+ +T +S++PL++++TD+WTSP+ SID YKYY++ VDH++R
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTR 556
Query: 4 Y 2
Y
Sbjct: 557 Y 557
Score = 26.9 bits (58), Expect(2) = 6e-24
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
R+C N V + F P H VKDL +G
Sbjct: 407 RMCNTNGVSVEFFPAHFQVKDLSTG 431
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 109 bits (272), Expect(2) = 6e-24
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL---SSLPLSAFASTTSNPS--T*HHKLGHPSSKIM-SLIKSF-LHISVSC 185
G + N +YE SS+ S FAS T + H +LGHPS I+ +LI F L IS S
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKTLISKFSLPISHSL 496
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C+ NKSHKLPF+ +T +S++PL++++TD+WTSP+ SID YKYY++ VDH++R
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTR 556
Query: 4 Y 2
Y
Sbjct: 557 Y 557
Score = 26.9 bits (58), Expect(2) = 6e-24
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
R+C N V + F P H VKDL +G
Sbjct: 407 RMCNTNGVSVEFFPAHFQVKDLSTG 431
>emb|CBI21397.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 110 bits (276), Expect(2) = 2e-23
Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 7/120 (5%)
Frame = -2
Query: 340 HSNNGVYEL-----SSLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKS--FLHISVSCT 182
+S +GVY+ S PL FAS ++ S HH LGHPS+K++S + S +H+S +
Sbjct: 76 NSKDGVYKWLTIHEKSKPLLIFASIKASTSNWHHHLGHPSTKVLSHLMSSQLIHLSFTSI 135
Query: 181 SNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSRY 2
NF +SC CNKSHKL F S+ +ST+ LQ +++D+W SP+ S + KYY+IF+DHF++Y
Sbjct: 136 RNFSYNSCHCNKSHKLHFFASSPTSTSSLQLLYSDVWCSPVESFNDNKYYVIFIDHFTKY 195
Score = 23.5 bits (49), Expect(2) = 2e-23
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 423 IDNNVFIIFSP*HLCVKDLQSGKIIIL 343
+ NNV I F P +KDL++G +++
Sbjct: 48 LTNNVSIEFFPRSFLMKDLRTGATLLI 74
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 107 bits (266), Expect(2) = 3e-23
Identities = 49/105 (46%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Frame = -2
Query: 304 PLSAFASTT--SNPST*HHKLGHPSSKIMSLIKS--FLHISVSCTSNFHCSSCACNKSHK 137
P S F +TT ++ ++ H +LGHPS + ++ S L +S S F+CS C NK+HK
Sbjct: 408 PSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHK 467
Query: 136 LPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSRY 2
LPFH +T +ST PL++++ DLWTSP+ SID +KYY++ VDH++RY
Sbjct: 468 LPFHTNTITSTQPLEYLYIDLWTSPIVSIDNFKYYLVIVDHYTRY 512
Score = 26.9 bits (58), Expect(2) = 3e-23
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
R+C N V + F P H VKDL++G
Sbjct: 362 RMCNANKVSVEFFPAHFQVKDLKTG 386
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 107 bits (267), Expect(2) = 4e-23
Identities = 55/121 (45%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL---SSLPLSAFASTTSNPS--T*HHKLGHPSSKIM-SLIKSF-LHISVSC 185
G + + +YE S+ P+S FAS T + + H +LGHPS ++ SL+ F L +S S
Sbjct: 528 GRTKDELYEWPVPSNTPISLFASPTPKTTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSS 587
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+F CS C NKSHKLPF+ +T S PL++V++D+WTSP+ S+D +KYY+I VDH++R
Sbjct: 588 QKHFPCSHCLINKSHKLPFYSNTIISYTPLEYVYSDVWTSPVTSVDNFKYYLILVDHYTR 647
Query: 4 Y 2
Y
Sbjct: 648 Y 648
Score = 26.2 bits (56), Expect(2) = 4e-23
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
+LC N V + F P H VKDL +G
Sbjct: 498 KLCNANKVSVEFFPAHFQVKDLSTG 522
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 106 bits (265), Expect(2) = 7e-23
Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYELS-SLPLSAFASTTSNPST*----HHKLGHPSSKIMS-LIKSF-LHISVSC 185
G + + +YE + P + TT +P T H +LGHPSS I++ LI F L +SVS
Sbjct: 436 GRTKDELYEWPVTNPKATALFTTPSPKTTLSSWHSRLGHPSSSILNTLISKFSLPVSVSA 495
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
++ CS C NKSHKLPF IS+ ST+PL+++F+D+W SP+ S D YKYY++ VDH +R
Sbjct: 496 SNKLACSDCFINKSHKLPFSISSIKSTSPLEYIFSDVWMSPILSPDNYKYYLVLVDHHTR 555
Query: 4 Y 2
Y
Sbjct: 556 Y 556
Score = 26.2 bits (56), Expect(2) = 7e-23
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSGKIII 346
RLC N V + F P VKDL +G +++
Sbjct: 406 RLCNTNQVSVEFFPASFQVKDLNTGTLLL 434
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 105 bits (262), Expect(2) = 7e-23
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYEL-----SSLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKSFLHISVSCT- 182
G + N +YE S L+A S ++ S+ H +LGHP+ I+ + S H+ +S T
Sbjct: 418 GRTRNELYEWPVNQKSITILTASPSPKTDLSSWHQRLGHPALPILKDVVSHFHLPLSNTI 477
Query: 181 -SNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
CS C+ NKSHKLPF +T S+ PL++++TD+WTSP S+D YKYY++ VDHF+R
Sbjct: 478 PKQLPCSDCSINKSHKLPFFTNTIVSSQPLEYLYTDVWTSPCISVDNYKYYLVIVDHFTR 537
Query: 4 Y 2
Y
Sbjct: 538 Y 538
Score = 27.3 bits (59), Expect(2) = 7e-23
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P H VKDL +G
Sbjct: 388 RLCNANQVSVEFFPAHFQVKDLNTG 412
>gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
Length = 678
Score = 102 bits (255), Expect(2) = 2e-22
Identities = 49/120 (40%), Positives = 79/120 (65%), Gaps = 8/120 (6%)
Frame = -2
Query: 337 SNNGVYELS------SLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKSFLHI-SVSCTS 179
+ NG+YEL S+ + F S ++ H +LGHPSS+I++ + F + S++
Sbjct: 147 NRNGLYELPRCMSHLSMITTTFLSVKTSFDVWHRRLGHPSSEILTFMLKFFGLPSIASNK 206
Query: 178 NFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLW-TSPLYSIDGYKYYIIFVDHFSRY 2
F C+SCACN+SHKLPF ST SST LQ ++TD+W + + ++G++YY+I++DHF++Y
Sbjct: 207 AFSCNSCACNESHKLPFGQSTLSSTKHLQLLYTDVWGPAQISFVEGFRYYVIYIDHFTKY 266
Score = 28.9 bits (63), Expect(2) = 2e-22
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSGKIIILAI 337
+ C NNVF+ F P H VKD G ++ ++
Sbjct: 115 KFCKTNNVFVEFFPFHFLVKDSSMGAPLVRSL 146
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 105 bits (261), Expect(2) = 2e-22
Identities = 52/121 (42%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE--LSSLPLSAFASTTSNPST*---HHKLGHPSSKIMS--LIKSFLHISVSC 185
G + + +YE +++ P +A ++ S +T H +LGHPS+ I++ L K L +SV+
Sbjct: 441 GRTKDDLYEWPVTNPPATALFTSPSPKTTLSSWHSRLGHPSASILNTLLSKFSLPVSVAS 500
Query: 184 TSNFHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
++ CS C NKSHKLPF S+ S++PL+++FTD+WTSP+ S D YKYY++ VDH++R
Sbjct: 501 SNKTSCSDCLINKSHKLPFATSSIHSSSPLEYIFTDVWTSPIISHDNYKYYLVLVDHYTR 560
Query: 4 Y 2
Y
Sbjct: 561 Y 561
Score = 26.2 bits (56), Expect(2) = 2e-22
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSGKIII 346
RLC N V + F P VKDL +G +++
Sbjct: 411 RLCNTNQVSVEFFPASFQVKDLNTGTLLL 439
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 435 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 494
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 495 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 554
Query: 4 Y 2
Y
Sbjct: 555 Y 555
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 405 RLCNANGVSVEFFPASFQVKDLNTG 429
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 435 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 494
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 495 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 554
Query: 4 Y 2
Y
Sbjct: 555 Y 555
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 405 RLCNANGVSVEFFPASFQVKDLNTG 429
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 435 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 494
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 495 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 554
Query: 4 Y 2
Y
Sbjct: 555 Y 555
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 405 RLCNANGVSVEFFPASFQVKDLNTG 429
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 400 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 459
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 460 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 519
Query: 4 Y 2
Y
Sbjct: 520 Y 520
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 370 RLCNANGVSVEFFPASFQVKDLNTG 394
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 430 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 489
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 490 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 549
Query: 4 Y 2
Y
Sbjct: 550 Y 550
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 400 RLCNANGVSVEFFPASFQVKDLNTG 424
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 104 bits (259), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Frame = -2
Query: 343 GHSNNGVYE---LSSLPLSAFASTTSNP--ST*HHKLGHPSSKIMSLIKSFLHISVSCTS 179
G + + +YE SS P+S FAS +S S+ H +LGHP+ I++ + S +SV S
Sbjct: 400 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS 459
Query: 178 N--FHCSSCACNKSHKLPFHISTSSSTNPLQFVFTDLWTSPLYSIDGYKYYIIFVDHFSR 5
+ CS C NKS+K+PF ST +ST PL+++++D+W+SP+ S D Y+YY+IFVDHF+R
Sbjct: 460 HKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTR 519
Query: 4 Y 2
Y
Sbjct: 520 Y 520
Score = 23.9 bits (50), Expect(2) = 2e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
RLC N V + F P VKDL +G
Sbjct: 370 RLCNANGVSVEFFPASFQVKDLNTG 394
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 103 bits (257), Expect(2) = 3e-21
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 13/127 (10%)
Frame = -2
Query: 343 GHSNNGVYE---------LSSLPLSAFASTTSNPST*HHKLGHPSSKIMSLIKSFLHISV 191
G S + VYE L + P A S ++ + HH+LGHPSS+I + ++ +
Sbjct: 415 GRSKDDVYEWPWPNKGNTLGTSPKQACVSVKTSLANWHHRLGHPSSRIFQFLIRKHNLQI 474
Query: 190 SCTSNFH---CSSCACNKSHKLPFHISTSSSTNPLQFVFTDLW-TSPLYSIDGYKYYIIF 23
T +FH C SC CNKSHKLPF +S+ S L V++D+W SP+ SIDG++YY+IF
Sbjct: 475 YPTESFHNFFCESCLCNKSHKLPFGVSSLRSRGXLDLVYSDVWGPSPIESIDGFRYYLIF 534
Query: 22 VDHFSRY 2
+D+F++Y
Sbjct: 535 IDYFTKY 541
Score = 23.5 bits (49), Expect(2) = 3e-21
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 432 RLCIDNNVFIIFSP*HLCVKDLQSG 358
+ C NN I F P +KDL++G
Sbjct: 385 KFCKTNNTSIEFFPSSFVIKDLKTG 409