BLASTX nr result

ID: Achyranthes23_contig00046355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00046355
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004499887.1| PREDICTED: F-box protein SKIP23-like isoform...    70   2e-10
gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis]                  68   1e-09
ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragar...    65   7e-09
gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus pe...    65   7e-09
gb|ESW20877.1| hypothetical protein PHAVU_005G022400g [Phaseolus...    64   2e-08
ref|XP_003599229.1| F-box protein [Medicago truncatula] gi|35548...    62   8e-08
ref|XP_003599197.1| F-box family protein [Medicago truncatula] g...    62   8e-08
ref|XP_002884031.1| hypothetical protein ARALYDRAFT_480586 [Arab...    61   1e-07
ref|XP_003599226.1| F-box protein [Medicago truncatula] gi|35548...    60   3e-07
ref|NP_565401.1| F-box protein SKIP23 [Arabidopsis thaliana] gi|...    58   1e-06
gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobro...    57   2e-06
gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobro...    57   2e-06
gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobro...    57   2e-06
ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Popu...    57   3e-06
ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanu...    55   7e-06
ref|XP_003599172.1| F-box protein SKIP23 [Medicago truncatula] g...    55   7e-06

>ref|XP_004499887.1| PREDICTED: F-box protein SKIP23-like isoform X1 [Cicer arietinum]
           gi|502127952|ref|XP_004499888.1| PREDICTED: F-box
           protein SKIP23-like isoform X2 [Cicer arietinum]
          Length = 397

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSIN---AFPL 184
           MADWS+LP++LL+ I+  L S  YL R   VCS+WR S++ +L+L L     N   +  L
Sbjct: 1   MADWSELPRDLLQLISEFLQSEFYLLRFRSVCSTWRSSISNNLHLYLPSQFPNPSHSINL 60

Query: 185 H--FNGISICKRSILLLSPPQIPISELPEK-FDPWVIKI 292
           H   N   + KR+I L+ PP  PI + P+    PW+IKI
Sbjct: 61  HSNTNTFPLSKRTIFLIIPP--PIPDHPQTLLQPWLIKI 97


>gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis]
          Length = 417

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MA+WSQLP ELLEEI   L SSIYL R   VCSSWR S++        +     FP   N
Sbjct: 1   MANWSQLPVELLEEIAKRLESSIYLLRFRSVCSSWRSSVSPR-----PRCLPGRFPFLPN 55

Query: 194 --------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                   G  + KR++ LL PP    +  P   D W++K+E+
Sbjct: 56  DGISDATWGFHLSKRTVFLLGPPP---NHDPSNRDLWLVKVED 95


>ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
          Length = 397

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTH-------LNLNLNKSSIN 172
           MA+WS LPKELLE+I   L S  YL RL  VCSSWR S            N  ++ S++ 
Sbjct: 1   MAEWSLLPKELLEDIAKRLGSPFYLLRLRSVCSSWRSSFPPRPRRFPFLTNYGISDSTL- 59

Query: 173 AFPLHFNGISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                  G  + KR++ LL+ P+ P        D W++KIEE
Sbjct: 60  -------GFHLSKRTVFLLASPKSP--------DRWLLKIEE 86


>gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus persica]
          Length = 406

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MADWSQLPKELLEEI   L S  YL R   VCSSWR S+++       +     FP   N
Sbjct: 1   MADWSQLPKELLEEIAKRLESPFYLLRFRSVCSSWRSSVSSR-----PRRLPGRFPFLTN 55

Query: 194 --------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                   G  + +R++ L+  P       P   D W++KIEE
Sbjct: 56  HGICDTTLGFHLSQRTVFLMGLPNFRNQTNP---DCWLVKIEE 95


>gb|ESW20877.1| hypothetical protein PHAVU_005G022400g [Phaseolus vulgaris]
          Length = 374

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MADWS+LPK+LL  I+  L + +YL R   VCSSWR S       + + SS + FP + +
Sbjct: 15  MADWSELPKDLLNLISQRLQNPLYLLRFRSVCSSWRSS-------SSSSSSSSPFPFYHS 67

Query: 194 -----GISICKRSILLLSPPQIPISELPEKFDPWVIKI 292
                  S+  RS+LL++PP    S  P    PW++KI
Sbjct: 68  ITLTPAFSLSHRSLLLINPP----STAP-NHRPWLVKI 100


>ref|XP_003599229.1| F-box protein [Medicago truncatula] gi|355488277|gb|AES69480.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
 Frame = +2

Query: 17  ADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSL---NTHLNLNLNKSSINAFPLH 187
           ADWS LPKELL  I+  ++  I + R   VCS+WR+S    N HLNL +N      FPLH
Sbjct: 40  ADWSDLPKELLNMISERIDIEIDMIRFRSVCSNWRRSSSVPNHHLNLTIN------FPLH 93

Query: 188 --------FNGISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                    +   + KRSI L+  PQ P  +      PW+++I +
Sbjct: 94  KSLSNSTITSFCCLSKRSIFLIK-PQPPQKQQQTLIRPWLVRITQ 137


>ref|XP_003599197.1| F-box family protein [Medicago truncatula]
           gi|355488245|gb|AES69448.1| F-box family protein
           [Medicago truncatula]
          Length = 423

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSL----NTHLNL----------- 148
           MADWSQLPK+LL+ I++ L+S  Y  R   VCSSWR S+    + HL L           
Sbjct: 14  MADWSQLPKDLLQLISSKLDSEFYQLRFRSVCSSWRSSVPKNHHHHLTLPSHLPTPSDSN 73

Query: 149 NLNKSSINAFPLHFNGISICKRSILLLSPPQIPISELPEKF--DPWVIKI 292
           NL+ S    FPL        KR+I L++PP        +    +PW+IKI
Sbjct: 74  NLHHSKSITFPL-------SKRTIFLITPPTNHHHHHQQTLNNNPWLIKI 116


>ref|XP_002884031.1| hypothetical protein ARALYDRAFT_480586 [Arabidopsis lyrata subsp.
           lyrata] gi|297329871|gb|EFH60290.1| hypothetical protein
           ARALYDRAFT_480586 [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQS------LNTHLNLNLNKSSINA 175
           M DWS LPK+LL+ I+  L SS  L +   VCSSWR +      L TH    L  +  + 
Sbjct: 1   MVDWSTLPKDLLDLISKSLESSFDLVQFRSVCSSWRSAAEPKRPLPTHHLPILPDNGGSL 60

Query: 176 FPLHFNGISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
           FP    G  + +RSILL+ P + P +E  + F  W+IK+EE
Sbjct: 61  FPDSAVGFRLSQRSILLIKPHEPPHNE-ADSFG-WLIKVEE 99


>ref|XP_003599226.1| F-box protein [Medicago truncatula] gi|355488274|gb|AES69477.1|
           F-box protein [Medicago truncatula]
          Length = 357

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
 Frame = +2

Query: 8   AIMADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSL---NTHLNLNLNKSSINAF 178
           A  ADWS LPKELL  I+  ++  I + R   VCS+W +S    N HLNL +N      F
Sbjct: 2   AAEADWSDLPKELLNMISERIDIEINMIRFRSVCSNWLRSSSVPNHHLNLTIN------F 55

Query: 179 PLH--------FNGISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
           PLH         +   + KRSI L+  PQ P  +      PW+++I +
Sbjct: 56  PLHKSLSNSTITSFCCLSKRSIFLIK-PQPPQKQQQTLIRPWLVRITQ 102


>ref|NP_565401.1| F-box protein SKIP23 [Arabidopsis thaliana]
           gi|122215148|sp|Q3EBZ2.1|SKI23_ARATH RecName: Full=F-box
           protein SKIP23; AltName: Full=SKP1-interacting partner
           23 gi|119935952|gb|ABM06043.1| At2g17030 [Arabidopsis
           thaliana] gi|330251480|gb|AEC06574.1| F-box protein
           SKIP23 [Arabidopsis thaliana]
          Length = 407

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQS------LNTHLNLNLNKSSINA 175
           M DWS LPK+LL+ I+  L SS  L +   VCSSWR +      L TH    L  +  + 
Sbjct: 1   MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSL 60

Query: 176 FPLHFNGISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
           FP    G  + +RSILL+ P +  I    + F  W+IK+EE
Sbjct: 61  FPDSAVGFRLSQRSILLIKPHEPCIES--DSFG-WLIKVEE 98


>gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobroma cacao]
          Length = 407

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MADW+QLPKELL+ I+  L+ S  +SR   VCS+WR S+ +     L       FP+  +
Sbjct: 1   MADWTQLPKELLDLISKSLDKSFDVSRFRSVCSTWRSSVTSPKRHRL----APRFPVLPD 56

Query: 194 ---------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                    G  + KR + LL  P+  I    +    WVIKIEE
Sbjct: 57  DGGISDTSFGFCLSKRIVFLLGSPETNIQ--ADSSASWVIKIEE 98


>gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobroma cacao]
          Length = 406

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MADW+QLPKELL+ I+  L+ S  +SR   VCS+WR S+ +     L       FP+  +
Sbjct: 1   MADWTQLPKELLDLISKSLDKSFDVSRFRSVCSTWRSSVTSPKRHRL----APRFPVLPD 56

Query: 194 ---------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                    G  + KR + LL  P+  I    +    WVIKIEE
Sbjct: 57  DGGISDTSFGFCLSKRIVFLLGSPETNIQ--ADSSASWVIKIEE 98


>gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobroma cacao]
          Length = 411

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MADW+QLPKELL+ I+  L+ S  +SR   VCS+WR S+ +     L       FP+  +
Sbjct: 1   MADWTQLPKELLDLISKSLDKSFDVSRFRSVCSTWRSSVTSPKRHRL----APRFPVLPD 56

Query: 194 ---------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
                    G  + KR + LL  P+  I    +    WVIKIEE
Sbjct: 57  DGGISDTSFGFCLSKRIVFLLGSPETNIQ--ADSSASWVIKIEE 98


>ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| hypothetical protein
           POPTR_0009s14200g [Populus trichocarpa]
          Length = 410

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSL---NTHLNLNLNKSSINAFPL 184
           MA+W+ LPK+L+E I+  L++S  L R   VC+SWR S+   +  L+ N  K   N    
Sbjct: 1   MAEWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSIPPKSPRLSSNTFKILPNDGIS 60

Query: 185 HFN-GISICKRSILLLSPPQIPISELPEKFDPWVIKIEE 298
           H + G S+ KRSI L+    +P S        W++KIEE
Sbjct: 61  HTSFGFSLFKRSIFLIG---LPNSHNQTDLQGWLVKIEE 96


>ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 456

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
 Frame = +2

Query: 14  MADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSLNTHLNLNLNKSSINAFPLHFN 193
           MA+WSQLP+EL+E I+ HL++     R   VCSSWR SL          SS++ FP+  N
Sbjct: 1   MAEWSQLPRELVELISKHLSTETDFLRFRSVCSSWRSSLPP----KPYPSSLSRFPILPN 56

Query: 194 --------GISICKRSILLLSPPQIPISELPEKFDPWVIKIEEK 301
                   G  + K  + L+ PP    S        W+IK++ +
Sbjct: 57  DGIAENSWGFKLSKSPLYLIRPPNQTTS---SDNHGWIIKLDRE 97


>ref|XP_003599172.1| F-box protein SKIP23 [Medicago truncatula]
           gi|355488220|gb|AES69423.1| F-box protein SKIP23
           [Medicago truncatula]
          Length = 360

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
 Frame = +2

Query: 17  ADWSQLPKELLEEITTHLNSSIYLSRLTFVCSSWRQSL-----NTHLNLNLNKSSINAFP 181
           ADWSQLP+ELL+ I+  LN  +YL R   VCS WR S+       +L +   + S   F 
Sbjct: 3   ADWSQLPRELLQLISQKLNRELYLIRSRSVCSWWRSSIPNYYQKHYLPVKFGQLSCQLFG 62

Query: 182 LHFN--GIS-ICKRSILLLSPPQIPISELPEKFDPWVIKI 292
            H N   IS + K  I L+ PP+    +      PW+I+I
Sbjct: 63  SHTNVDAISYLIKHDIFLIKPPK---HKQTLHQCPWLIRI 99


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