BLASTX nr result

ID: Achyranthes23_contig00046053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00046053
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ01590.1| hypothetical protein PRUPE_ppa012540mg [Prunus pe...    60   2e-07
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-li...    59   7e-07
gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus pe...    59   7e-07
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote...    59   7e-07
gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis]        59   9e-07
gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul...    58   1e-06
ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Pop...    58   1e-06
ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-...    57   3e-06
ref|XP_006844661.1| hypothetical protein AMTR_s00016p00239570 [A...    55   1e-05

>gb|EMJ01590.1| hypothetical protein PRUPE_ppa012540mg [Prunus persica]
          Length = 165

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
 Frame = -2

Query: 208 PSIVKMEE-------SKTANLNCENGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKS 50
           P++VKME+       SK +N    +   I+ARF ++CK   SLD  A+++A+KLF + K 
Sbjct: 4   PALVKMEDTNPKVLASKNSNSESRDSDPIQARFNDLCKNGLSLDDNAYTQAMKLFKETKH 63

Query: 49  ILFNNVSTIGSATPED 2
           +L +N   IG+ TPE+
Sbjct: 64  LLTSNALAIGNGTPEE 79


>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-like [Fragaria vesca
           subsp. vesca]
          Length = 1026

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
 Frame = -2

Query: 208 PSIVKMEESKT---ANLNCENG----GEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKS 50
           P+++KME+SKT   A+ N  +G      ++ARF + CK   SLD    ++A+KL  + K 
Sbjct: 4   PAVLKMEDSKTEASASTNSNSGTGDLDPVKARFTDFCKNGLSLDENTLTQALKLLLETKH 63

Query: 49  ILFNNVSTIGSATPED 2
           +L +N S IG+ TPE+
Sbjct: 64  VLISNSSAIGNGTPEE 79


>gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
          Length = 1026

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
 Frame = -2

Query: 208 PSIVKMEE-------SKTANLNCENGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKS 50
           P++VKME+       S ++N    +   + ARF ++CK   SLD   +++A+KLF + K 
Sbjct: 4   PAMVKMEDTNPEVSASNSSNSESRDSDPVGARFTDLCKNGLSLDENPYTQAMKLFKETKH 63

Query: 49  ILFNNVSTIGSATPED 2
           +L +N S IG+ TPE+
Sbjct: 64  LLISNASAIGNGTPEE 79


>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
           gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
           [Cocos nucifera]
          Length = 1011

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = -2

Query: 214 MSPSIVKMEESKTA-NLNCENGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKSILFN 38
           MS + V ME+ K + +L  ++GG +EAR  ++CK++ +LD +   +A+ LF + K IL  
Sbjct: 1   MSQASVDMEDVKPSISLPSDDGGAMEARLTDVCKSKLALDESTMRQAMILFRESKHILLA 60

Query: 37  NVSTIGSATPED 2
           N+S IGS +PE+
Sbjct: 61  NMSAIGSGSPEE 72


>gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis]
          Length = 1037

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = -2

Query: 208 PSIVKMEESKTANLNCENGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKSILFNNVS 29
           PSI     S TA++N  N    EARF++ CK   +LD    +EA+KLF + K +L  NVS
Sbjct: 6   PSISAPNASHTADVNGGNVDPAEARFSDFCKNGLALDAKTRAEALKLFGETKHLLQTNVS 65

Query: 28  TIGSATPED 2
            IGS TPE+
Sbjct: 66  GIGSGTPEE 74


>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
           tremuloides]
          Length = 1035

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
 Frame = -2

Query: 214 MSPSIVK-MEESKTANL----NCENGGE--------IEARFAEICKTQFSLDHTAFSEAV 74
           MSP+ +K MEE+KT  +    +  +GGE        +E RF++ CK+  +LD    ++A+
Sbjct: 1   MSPAALKNMEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAI 60

Query: 73  KLFTDGKSILFNNVSTIGSATPED 2
           KLF D K +L  NVS+IG+ T E+
Sbjct: 61  KLFKDTKHLLMTNVSSIGNGTSEE 84


>ref|XP_002297730.1| RETINOBLASTOMA-RELATED 1 family protein [Populus trichocarpa]
           gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
           Full=Retinoblastoma-related protein
           gi|222844988|gb|EEE82535.1| RETINOBLASTOMA-RELATED 1
           family protein [Populus trichocarpa]
          Length = 1035

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
 Frame = -2

Query: 214 MSPSIVK-MEESKTANL----NCENGGE--------IEARFAEICKTQFSLDHTAFSEAV 74
           MSP+ +K MEE+KT  +    +  +GGE        +E RF++ CK+  +LD    ++A+
Sbjct: 1   MSPAALKNMEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAI 60

Query: 73  KLFTDGKSILFNNVSTIGSATPED 2
           KLF D K +L  NVS+IG+ T E+
Sbjct: 61  KLFKDTKHLLMTNVSSIGNGTSEE 84


>ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-like [Cicer arietinum]
          Length = 1028

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 PSIVKMEESKTANLNCENGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKSILFNNVS 29
           P+ + ME+ K +    +NG + E+RF+E CK + +L+  +  EA+ LF + K +L  NVS
Sbjct: 4   PAEIDMEDIKPSVTLVDNGEQAESRFSEFCKNELALEEKSCKEAMDLFGETKHLLIANVS 63

Query: 28  TIGSATPED 2
           ++G+ T ED
Sbjct: 64  SLGNGTSED 72


>ref|XP_006844661.1| hypothetical protein AMTR_s00016p00239570 [Amborella trichopoda]
           gi|548847132|gb|ERN06336.1| hypothetical protein
           AMTR_s00016p00239570 [Amborella trichopoda]
          Length = 1021

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = -2

Query: 199 VKMEESKTANLNCE---NGGEIEARFAEICKTQFSLDHTAFSEAVKLFTDGKSILFNNVS 29
           VKMEE K   L+     +GG +EAR  E CK    LD    ++A+ LF + K +L  N+S
Sbjct: 4   VKMEEIKPLTLSSNLISDGGGMEARLLEFCKMGLLLDENTTTQAMSLFRESKHLLLANMS 63

Query: 28  TIGSATPED 2
            +GS TPE+
Sbjct: 64  ALGSGTPEE 72


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