BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00045638
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-li...   183   2e-44
ref|NP_569141.1| polyprotein [Tobacco vein clearing virus] gi|64...   182   3e-44
emb|CAB42622.1| putative polyprotein (aspartic proteinase, rever...   182   5e-44
emb|CAC88781.1| putative polyprotein [Nicotiana tabacum]              182   5e-44
emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]              181   1e-43
ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]...   167   1e-39
ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassav...   131   8e-29
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]      130   2e-28
ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus] ...   129   4e-28
gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like ...   126   3e-27
gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like ...   126   3e-27
gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like ...   125   4e-27
gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like ...   125   4e-27
gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like ...   124   1e-26
gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like ...   124   1e-26
gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like ...   124   1e-26
gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosa...   122   6e-26
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu...   120   2e-25
sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Inclu...   120   2e-25
gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]       120   2e-25

>ref|XP_004247251.1| PREDICTED: putative enzymatic polyprotein-like [Solanum
           lycopersicum]
          Length = 428

 Score =  183 bits (465), Expect = 2e-44
 Identities = 85/130 (65%), Positives = 105/130 (80%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           LTAFTVP GFYEWNVLPFGYKNAPGR+Q FMD+ +NQL+NC++YIDDILL+SKTQ++H +
Sbjct: 109 LTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIIYIDDILLYSKTQDEHIK 168

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  FI I K  GISLS+ K  I K QIEFLG++ID  G+KMQ HI +KII   + I+TK
Sbjct: 169 LLEKFIHIIKQSGISLSKSKAEIMKPQIEFLGIQIDKNGIKMQTHIVQKIITIDENIDTK 228

Query: 31  KELQSFSGTI 2
           K+LQSF G +
Sbjct: 229 KKLQSFLGLV 238


>ref|NP_569141.1| polyprotein [Tobacco vein clearing virus]
           gi|6425075|gb|AAF08289.1|AF190123_3 polyprotein [Tobacco
           vein clearing virus]
          Length = 635

 Score =  182 bits (463), Expect = 3e-44
 Identities = 84/130 (64%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           LTAFTVP GFYEWNVLPFGYKNAPGR+Q FMD+ +NQL+NC+VYIDDILL+S+TQ++H +
Sbjct: 316 LTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIVYIDDILLYSRTQDEHIK 375

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  F  I ++ GISLS+ K  I KNQIEFLG++ID  G+KMQ HI +KII   + I+TK
Sbjct: 376 LLEKFAHIIENSGISLSKTKAEIMKNQIEFLGIQIDKNGIKMQTHIVQKIINLDENIDTK 435

Query: 31  KELQSFSGTI 2
           K+LQSF G +
Sbjct: 436 KKLQSFLGIV 445


>emb|CAB42622.1| putative polyprotein (aspartic proteinase, reverse transcriptase,
           ribonuclease H) [Nicotiana tabacum]
          Length = 636

 Score =  182 bits (461), Expect = 5e-44
 Identities = 81/130 (62%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           LTAFTVP GFYEWNVLPFGYKNAPGR+Q FMD+ +NQL+NC++YIDDILL+S+T+ +H +
Sbjct: 316 LTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIIYIDDILLYSRTENEHIK 375

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  FI I +  GISLS+KK  + KNQIEFLG++ID  G+KMQ H+ +KII   + ++TK
Sbjct: 376 LLEKFIHIVEISGISLSKKKAEVMKNQIEFLGIQIDKNGIKMQTHVVQKIINLNETLDTK 435

Query: 31  KELQSFSGTI 2
           K+LQSF G +
Sbjct: 436 KKLQSFLGLV 445


>emb|CAC88781.1| putative polyprotein [Nicotiana tabacum]
          Length = 475

 Score =  182 bits (461), Expect = 5e-44
 Identities = 81/130 (62%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           LTAFTVP GFYEWNVLPFGYKNAPGR+Q FMD+ +NQL+NC++YIDDILL+S+T+ +H +
Sbjct: 316 LTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIIYIDDILLYSRTENEHIK 375

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  FI I +  GISLS+KK  + KNQIEFLG++ID  G+KMQ H+ +KII   + ++TK
Sbjct: 376 LLEKFIHIVEISGISLSKKKAEVMKNQIEFLGIQIDKNGIKMQTHVVQKIINLNETLDTK 435

Query: 31  KELQSFSGTI 2
           K+LQSF G +
Sbjct: 436 KKLQSFLGLV 445


>emb|CAC88785.1| putative polyprotein [Nicotiana tabacum]
          Length = 517

 Score =  181 bits (458), Expect = 1e-43
 Identities = 80/130 (61%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           LTAFTVP GFYEWNVLPFGYKNAPGR+Q FMD+ +NQL+NC++YIDDILL+S+T+ +H +
Sbjct: 316 LTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIIYIDDILLYSRTENEHIK 375

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  FI I +  GISLS+KK  + KNQIEFLG+++D  G+KMQ H+ +KII   + ++TK
Sbjct: 376 LLEKFIHIVEISGISLSKKKAEVMKNQIEFLGIQMDKNGIKMQTHVVQKIINLNETLDTK 435

Query: 31  KELQSFSGTI 2
           K+LQSF G +
Sbjct: 436 KKLQSFLGLV 445


>ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]
           gi|325698381|gb|ADZ45064.1| replicase [Sweet potato vein
           clearing virus]
          Length = 619

 Score =  167 bits (424), Expect = 1e-39
 Identities = 80/130 (61%), Positives = 102/130 (78%)
 Frame = -2

Query: 391 LTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHTR 212
           L+AF VP GFYE+NVL FGYKNAPGR+Q +MDS +++L+NC+VYIDDILL+SKT+++H  
Sbjct: 301 LSAFNVPQGFYEFNVLMFGYKNAPGRYQCYMDSYFSKLENCIVYIDDILLYSKTKDEHET 360

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
           +L  F  I K  G+SLSEKK  I  NQIEFLG+EID  GVKMQ HI  KI++  + ++TK
Sbjct: 361 LLKKFYHIVKEAGVSLSEKKAIIGVNQIEFLGIEIDKSGVKMQNHIVTKIVQCEEVLDTK 420

Query: 31  KELQSFSGTI 2
           K+LQSF G I
Sbjct: 421 KKLQSFLGLI 430


>ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassava vein mosaic virus]
           gi|81945490|sp|Q89703.1|POL_CSVMV RecName: Full=Putative
           enzymatic polyprotein; Includes: RecName: Full=Protease;
           Short=PR; Includes: RecName: Full=Reverse transcriptase;
           Short=RT; Includes: RecName: Full=Ribonuclease H
           gi|665934|gb|AAA79873.1| ORF III [Cassava vein mosaic
           virus] gi|1399884|gb|AAB03327.1| ORF 3 [Cassava vein
           mosaic virus]
          Length = 652

 Score =  131 bits (330), Expect = 8e-29
 Identities = 65/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y+W VLPFGY N+P  FQ FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 319 TAFTVPQGYYQWKVLPFGYHNSPSIFQQFMDRIFRPYYDFIIVYIDDILVFSKTIEEHKI 378

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            +  F +IT   G+ +S+KKT + K +I+FLG++I+  G+++QPHI  KI+E   +I  K
Sbjct: 379 HIAKFRDITLANGLIISKKKTELCKEKIDFLGVQIEQGGIELQPHIINKILEKHTKIKNK 438

Query: 31  KELQSFSGTI 2
            ELQS  G +
Sbjct: 439 TELQSILGLL 448


>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score =  130 bits (326), Expect = 2e-28
 Identities = 65/131 (49%), Positives = 85/131 (64%)
 Frame = -2

Query: 394  PLTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDNCVVYIDDILLFSKTQEDHT 215
            P TAFT P G +EWNVL FG KNAP  FQ FMDS + + + C+VYIDDIL+ S T ++H 
Sbjct: 1028 PWTAFTCPEGLFEWNVLSFGLKNAPAIFQRFMDSLFKKYEFCIVYIDDILVASDTVQEHI 1087

Query: 214  RILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINT 35
            + L    +  K  GI +S+KKT I K  I FLGL+I    +++QPHI  K +E  D+I  
Sbjct: 1088 KHLELVFKTIKEAGIVISKKKTEIAKTYINFLGLKIGKGQIELQPHIVTKALEYPDKIEN 1147

Query: 34   KKELQSFSGTI 2
            K +LQSF G +
Sbjct: 1148 KNKLQSFLGLL 1158


>ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus]
           gi|327415369|gb|ADR03142.2| replicase [Sweet potato
           caulimo-like virus]
          Length = 641

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/130 (52%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 315 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 374

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  I    GI LS+KK  I K +IEFLG++I+  G+++QPHI +KI+E   +I +K
Sbjct: 375 HLEIFRNIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQGGIELQPHIIDKILEKHIKIKSK 434

Query: 31  KELQSFSGTI 2
           KELQS  G +
Sbjct: 435 KELQSILGLV 444


>gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  126 bits (316), Expect = 3e-27
 Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  I    GI LS+KK  I K +IEFLG++I+  G+++QPHI +KI+E   +I +K
Sbjct: 225 HLAIFRSIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQGGIELQPHIIDKILEKHIKIKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  126 bits (316), Expect = 3e-27
 Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  I    GI LS+KK  I K +IEFLG++I+  G+++QPHI +KI+E   +I +K
Sbjct: 225 HLAIFRSIIIKHGIVLSKKKAEIGKQKIEFLGVKIEQGGIELQPHIIDKILEKHIKIKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  +    GI LS+KK  I K +IEFLG+ I+  G+++QPHI +KI+E   +I +K
Sbjct: 225 HLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQGGIELQPHIIDKILEKHIKIKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  125 bits (315), Expect = 4e-27
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  +    GI LS+KK  I K +IEFLG+ I+  G+++QPHI +KI+E   +I +K
Sbjct: 225 HLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQGGIELQPHIIDKILEKHIKIKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  124 bits (312), Expect = 1e-26
 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  I    GI LS+KK  I + +IEFLG++I+  G+++QPHI +KI+E   +I  K
Sbjct: 225 HLAIFRSIIIKHGIVLSKKKAEIGRQKIEFLGVKIEQGGIELQPHIIDKILEKHIKIKNK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like virus]
           gi|325698343|gb|ADZ45042.1| reverse transcriptase [Sweet
           potato caulimo-like virus]
          Length = 291

 Score =  124 bits (312), Expect = 1e-26
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    +  +VYIDDIL+FSKT E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYEFILVYIDDILIFSKTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  I    GI LS+KK  I K +IEFLG++I+  G+++QPHI +KI+E   ++ +K
Sbjct: 225 HLMIFRNIILKHGIVLSKKKAEIGKQKIEFLGVKIEQGGIELQPHIIDKILEKHIKVKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like virus]
          Length = 291

 Score =  124 bits (311), Expect = 1e-26
 Identities = 64/125 (51%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -2

Query: 388 TAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQL-DNCVVYIDDILLFSKTQEDHTR 212
           TAFTVP G+Y W VLPFGY N+P  +Q FMD  +    D  +VYIDDIL+FS+T E+H  
Sbjct: 165 TAFTVPQGYYVWIVLPFGYHNSPSIYQQFMDGIFRPYYDFILVYIDDILIFSRTYEEHKI 224

Query: 211 ILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEINTK 32
            L  F  +    GI LS+KK  I K +IEFLG+ I+  G+++QPHI +KI+E   ++ +K
Sbjct: 225 HLEIFRNLVIKYGIVLSKKKAEIGKQRIEFLGVRIEQGGIELQPHIIDKILEKHIKVKSK 284

Query: 31  KELQS 17
           KELQS
Sbjct: 285 KELQS 289


>gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score =  122 bits (305), Expect = 6e-26
 Identities = 65/132 (49%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
 Frame = -2

Query: 394 PLTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDN-CVVYIDDILLFSKTQEDH 218
           PLTAFT P G YEWNV+PFG K AP  FQ  MD  +      C VY+DDIL+FS T+EDH
Sbjct: 351 PLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNTEEDH 410

Query: 217 TRILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEIN 38
              +   ++     GI LS+KK  +FK +I FLGLEID    K Q HI E I +  D + 
Sbjct: 411 LLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLE 470

Query: 37  TKKELQSFSGTI 2
            KK+LQ F G +
Sbjct: 471 DKKQLQRFLGIL 482


>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|293185|gb|AAA62375.1| reverse
           transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/132 (48%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = -2

Query: 394 PLTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDN-CVVYIDDILLFSKTQEDH 218
           PLTAFT P G YEWNV+PFG K AP  FQ  MD  +      C VY+DDIL+FS  +EDH
Sbjct: 356 PLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDH 415

Query: 217 TRILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEIN 38
              +   ++     GI LS+KK  +FK +I FLGLEID    K Q HI E I +  D + 
Sbjct: 416 LLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLE 475

Query: 37  TKKELQSFSGTI 2
            KK+LQ F G +
Sbjct: 476 DKKQLQRFLGIL 487


>sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 674

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/132 (48%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = -2

Query: 394 PLTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDN-CVVYIDDILLFSKTQEDH 218
           PLTAFT P G YEWNV+PFG K AP  FQ  MD  +      C VY+DDIL+FS  +EDH
Sbjct: 351 PLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDH 410

Query: 217 TRILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEIN 38
              +   ++     GI LS+KK  +FK +I FLGLEID    K Q HI E I +  D + 
Sbjct: 411 LLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLE 470

Query: 37  TKKELQSFSGTI 2
            KK+LQ F G +
Sbjct: 471 DKKQLQRFLGIL 482


>gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/132 (48%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = -2

Query: 394 PLTAFTVPNGFYEWNVLPFGYKNAPGRFQSFMDSCYNQLDN-CVVYIDDILLFSKTQEDH 218
           PLTAFT P G YEWNV+PFG K AP  FQ  MD  +      C VY+DDIL+FS  +EDH
Sbjct: 352 PLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDH 411

Query: 217 TRILNNFIEITKHKGISLSEKKT*IFKNQIEFLGLEIDVLGVKMQPHIAEKIIESTDEIN 38
              +   ++     GI LS+KK  +FK +I FLGLEID    K Q HI E I +  D + 
Sbjct: 412 LLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLE 471

Query: 37  TKKELQSFSGTI 2
            KK+LQ F G +
Sbjct: 472 DKKQLQRFLGIL 483