BLASTX nr result
ID: Achyranthes23_contig00045510
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00045510
(465 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 144 9e-33
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 80 4e-13
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 80 4e-13
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ... 80 4e-13
gb|EXB42920.1| DNA-directed RNA polymerase 3 [Morus notabilis] 79 6e-13
emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana] 78 1e-12
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr... 78 1e-12
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps... 78 1e-12
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal... 78 1e-12
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 78 1e-12
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat... 78 1e-12
dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol... 78 1e-12
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 78 1e-12
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe... 77 2e-12
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 77 3e-12
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 77 3e-12
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 73 3e-11
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 73 4e-11
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 73 4e-11
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 72 6e-11
>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 144 bits (364), Expect = 9e-33
Identities = 86/161 (53%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
Frame = -3
Query: 460 TQRTHFSLFIPLPNSHLRXXXXXXXXXXXXXXXXXXXXXXXSY-----KNSVYQPSLQSQ 296
++ THFSLFIPL + LR S K S +QPS QSQ
Sbjct: 30 SKTTHFSLFIPLSSKQLRIEHPLFPSSSSSSNSFPSTLSLPSLTPKLGKTSFFQPSPQSQ 89
Query: 295 IIL---EEDLAEKDDGQFRNSEKLKNEIQLNGRIFMQDPPWVNALFTKGLCEGNNGXXXX 125
IIL EE+LAEK DG FRNS+K+K + RIFMQDPPWVN LF KGL + N G
Sbjct: 90 IILDSPEEELAEKMDGHFRNSDKIKG----SSRIFMQDPPWVNTLFMKGLVDSNTGLRLE 145
Query: 124 XXXXXXXKYNLLRRRQIKAETEAWENMVEEYREFVKEMREK 2
KYNLLRRRQIKAETEAWE+MVEEYREFV+EMR+K
Sbjct: 146 FKEIEREKYNLLRRRQIKAETEAWESMVEEYREFVREMRDK 186
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCE-GNNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEY 32
R+F+QDPPW++ALF KGL + N KYNLLRRRQ+K ETEAWE MVEEY
Sbjct: 103 RLFIQDPPWISALFLKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEY 162
Query: 31 REFVKEMREK 2
RE +EM EK
Sbjct: 163 RELQREMCEK 172
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCE-GNNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEY 32
R+F+QDPPW++ALF KGL + N KYNLLRRRQ+K ETEAWE MVEEY
Sbjct: 103 RLFIQDPPWISALFLKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEY 162
Query: 31 REFVKEMREK 2
RE +EM EK
Sbjct: 163 RELQREMCEK 172
>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
[Ricinus communis] gi|223532193|gb|EEF33998.1|
DNA-directed RNA polymerase 3B, chloroplast precursor,
putative [Ricinus communis]
Length = 1000
Score = 79.7 bits (195), Expect = 4e-13
Identities = 51/112 (45%), Positives = 63/112 (56%), Gaps = 16/112 (14%)
Frame = -3
Query: 289 LEEDLAEKDDGQFRNSEKLKNEIQLN---------------GRIFMQDPPWVNALFTKGL 155
L EDL E G N +KL+ I+L+ R+F+QDPPW++ALF KGL
Sbjct: 74 LLEDLVENPIG---NHQKLETLIKLDLPTNHNHQVLPEESSRRVFIQDPPWISALFFKGL 130
Query: 154 CE-GNNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEYREFVKEMREK 2
+ N KYNLLRRRQI+ ETEAWE MVEEY+ VKEM E+
Sbjct: 131 YKIPNKEVKLEFKDIEKRKYNLLRRRQIREETEAWERMVEEYKALVKEMCER 182
>gb|EXB42920.1| DNA-directed RNA polymerase 3 [Morus notabilis]
Length = 604
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 NGRIFMQDPP-WVNALFTKGLCEGNNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVE 38
N RIF QDPP W+ +LF KG+ G +YNLLRRRQI+AETEAWE E
Sbjct: 103 NPRIFFQDPPPWIASLFLKGIFNGGEAVRVESREIERRRYNLLRRRQIRAETEAWERTAE 162
Query: 37 EYREFVKEMREK 2
EYRE +EMRE+
Sbjct: 163 EYREIEREMRER 174
>emb|CAA74929.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 282
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 106 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTLKIERKDIDKRKFDSLRRR 165
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 166 QVKEETEAWERMVDEYRDLEKEMCEK 191
>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
gi|557106040|gb|ESQ46365.1| hypothetical protein
EUTSA_v10000030mg [Eutrema salsugineum]
Length = 993
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 106 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTVKIERKDIDKRKFDSLRRR 165
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 166 QVKEETEAWEKMVDEYRDLEKEMCEK 191
>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
gi|482564829|gb|EOA29019.1| hypothetical protein
CARUB_v10025273mg [Capsella rubella]
Length = 991
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 104 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTVKIEHKYIDKRKFDSLRRR 163
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 164 QVKEETEAWEKMVDEYRDLEKEMCEK 189
>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase
3 [Arabidopsis thaliana]
Length = 895
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 106 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTLKIERKDIDKRKFDSLRRR 165
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 166 QVKEETEAWERMVDEYRDLEKEMCEK 191
>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic;
Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|2330564|emb|CAA69717.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|110739160|dbj|BAF01496.1| chloroplast
single subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
polymerase 3 [Arabidopsis thaliana]
Length = 993
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 106 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTLKIERKDIDKRKFDSLRRR 165
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 166 QVKEETEAWERMVDEYRDLEKEMCEK 191
>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 990
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 103 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTLKIERKDIDKRKFDSLRRR 162
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 163 QVKEETEAWERMVDEYRDLEKEMCEK 188
>dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase
[Arabidopsis thaliana]
Length = 786
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLNG-----RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E+L+N ++ NG R+FMQDPPW++ALF KGL + + K++ LRRR
Sbjct: 106 EELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTLKIERKDIDKRKFDSLRRR 165
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
Q+K ETEAWE MV+EYR+ KEM EK
Sbjct: 166 QVKEETEAWERMVDEYRDLEKEMCEK 191
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = -3
Query: 241 EKLKNEIQLN-----GRIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRR 80
E L+N I+ RIF+QDPPW+ +LF KG+ + N KYNLLRRR
Sbjct: 83 ENLENSIKFQVPISEPRIFIQDPPWIASLFLKGMFKKVNKELKVESKEIDRRKYNLLRRR 142
Query: 79 QIKAETEAWENMVEEYREFVKEMREK 2
QIKAETEAWE MVE+Y++ + MREK
Sbjct: 143 QIKAETEAWEKMVEDYKDLERVMREK 168
>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCE-GNNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEY 32
RIF+QDPPW+ +LF KG+ + N YN+LRRRQIKAETEAWE MV+EY
Sbjct: 102 RIFIQDPPWIASLFLKGIYKRANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDEY 161
Query: 31 REFVKEMREK 2
++ K MREK
Sbjct: 162 KDLEKVMREK 171
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEY 32
RIF+QDPPW+ +LF KGL + KYNLLRRRQIKAETEAWE MVEEY
Sbjct: 103 RIFIQDPPWIASLFLKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEY 162
Query: 31 REFVKEMREK 2
+E +EM EK
Sbjct: 163 KELEREMCEK 172
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCEG-NNGXXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEY 32
RIF+QDPPW+ +LF KGL + KYNLLRRRQIKAETEAWE MVEEY
Sbjct: 103 RIFIQDPPWIASLFLKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEY 162
Query: 31 REFVKEMREK 2
+E +EM EK
Sbjct: 163 KELEREMCEK 172
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
AltName: Full=NsRpoT-C; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3;
Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
RecName: Full=DNA-directed RNA polymerase 3A,
chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
Full=T7 bacteriophage-type single subunit RNA polymerase
3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
phage-type RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Frame = -3
Query: 247 NSEKLKNEI---QLNGRIFMQDPPWVNALFTKGLC----EGNNGXXXXXXXXXXXKYNLL 89
N +K+ N + + N R+F+QDPPWV++LF L + +Y +L
Sbjct: 84 NLQKIANGVLTKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAML 143
Query: 88 RRRQIKAETEAWENMVEEYREFVKEMREK 2
RRRQIKAETEAWE MVEEYRE +EM EK
Sbjct: 144 RRRQIKAETEAWEQMVEEYRELEREMCEK 172
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCEGNN----GXXXXXXXXXXXKYNLLRRRQIKAETEAWENMV 41
RIF+QDPPW+++ CE N Y LLRRRQ+KAETEAWE MV
Sbjct: 103 RIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMV 162
Query: 40 EEYREFVKEMREK 2
EEYRE +EM EK
Sbjct: 163 EEYREIEREMCEK 175
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = -3
Query: 208 RIFMQDPPWVNALFTKGLCEGNN----GXXXXXXXXXXXKYNLLRRRQIKAETEAWENMV 41
RIF+QDPPW+++ CE N Y LLRRRQ+KAETEAWE MV
Sbjct: 103 RIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMV 162
Query: 40 EEYREFVKEMREK 2
EEYRE +EM EK
Sbjct: 163 EEYREIEREMCEK 175
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Solanum tuberosum]
Length = 1015
Score = 72.4 bits (176), Expect = 6e-11
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Frame = -3
Query: 286 EEDLAEKDDGQFRNSEKLKNEIQL------NGRIFMQDPPWVNALFTKGLC----EGNNG 137
+E+L E + + N +K+ N L N R+F+QDPPWV++LF L +
Sbjct: 107 DENLTENLE-ELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLFMNSLFVRAKQVKGV 165
Query: 136 XXXXXXXXXXXKYNLLRRRQIKAETEAWENMVEEYREFVKEMREK 2
+Y +LRRRQIKAETEAWE MVEEYRE +EM EK
Sbjct: 166 RREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEK 210