BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00045269
         (373 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]      177   1e-42
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    90   3e-16
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...    89   6e-16
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    77   2e-12
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...    77   3e-12
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom...    77   3e-12
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...    77   3e-12
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...    76   4e-12
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...    76   4e-12
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...    76   4e-12
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...    75   9e-12
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    72   1e-10
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    70   2e-10
gb|ABD96891.1| hypothetical protein [Cleome spinosa]                   66   4e-09
ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutr...    63   5e-08
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...    61   1e-07
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu...    61   1e-07
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    61   2e-07
gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis]        60   2e-07

>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score =  177 bits (450), Expect = 1e-42
 Identities = 86/123 (69%), Positives = 100/123 (81%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           ++LKFRPF+L  CK   FSEVGFCR+GG L  E +GERP+SG L N+ N NV CPKGYAS
Sbjct: 80  DRLKFRPFELGFCKNRSFSEVGFCREGGSLVKEGIGERPVSGCLGNRLNFNVVCPKGYAS 139

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQML 12
           VVEAE+ SSTD EDD+SVFDEIQELVEEMRKEE RAKWR  HQR+ K+VAG+P ++YQ L
Sbjct: 140 VVEAEVDSSTDLEDDVSVFDEIQELVEEMRKEEKRAKWRESHQRQQKMVAGMPLYKYQKL 199

Query: 11  RKR 3
           R R
Sbjct: 200 RNR 202


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 57/123 (46%), Positives = 71/123 (57%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           E +KF  F+ S C    FSE+GF R G     E+   RP  G L NQ   +  CPK YAS
Sbjct: 81  EIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYAS 140

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQML 12
           V EA  VSSTD E+D+S  DEIQEL+ EM+KEE R +     + K K+  G+   RY  L
Sbjct: 141 VAEA--VSSTDVEEDVSASDEIQELLGEMKKEEKR-QVNFKRREKLKMERGMEQGRYLRL 197

Query: 11  RKR 3
           R+R
Sbjct: 198 RRR 200


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 53/119 (44%), Positives = 71/119 (59%)
 Frame = -3

Query: 359 FRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEA 180
           F+PF+LS C  LRFSEVGF  KG     E+   +P    + N    N  CPKGYASV EA
Sbjct: 77  FKPFELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEA 136

Query: 179 ELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
             VSSTD E+++SV DE+QEL+++M  EE R        R+ +   G+   +Y ML++R
Sbjct: 137 --VSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNR-ARGMGQGKYHMLKRR 192


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           +K   R F    C    F E+GF   G FL  +E   RP+   + +Q + N  C K YAS
Sbjct: 69  DKRTLRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRKNYAS 128

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVV-AGLPPHRYQM 15
           V EA  VSSTD E+D+SV  E+QEL+ E++KEE   K     +RK +++ +G+   +Y  
Sbjct: 129 VAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEK--KQFTFRRRKQRMLTSGIDRRKYPA 186

Query: 14  LRKR 3
           L +R
Sbjct: 187 LMRR 190


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           +  KFR      C  +    +GF   G +L  +E   RP+   + NQ N N  C K YAS
Sbjct: 73  DNTKFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPL---IKNQVNNNFCCRKSYAS 126

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVV-AGLPPHRYQM 15
           V EA  VSSTD E+D+SV DE+ EL+ E++KEE   K  A  +RK +++ +G+   +YQ 
Sbjct: 127 VAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEK--KQFAFRRRKQRMLTSGMGHRKYQT 184

Query: 14  LRKR 3
           L++R
Sbjct: 185 LKRR 188


>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1100

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 EKLKFRPFKL-SLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYA 195
           EK KFR  K  S C   RF ++G  R G  L N E   +   G   N+   +  CP+GY 
Sbjct: 78  EKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGSPRNEIGCSGLCPRGYV 137

Query: 194 SVVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQM 15
           SV EA  VSSTD E+D+SV +EI+EL++EM+KE+ R       +R   +  G+   +Y+ 
Sbjct: 138 SVAEA--VSSTDVEEDVSVVEEIKELLDEMKKEQRRETGNR-RRRCQIIERGMGESKYRF 194

Query: 14  LRKR 3
           LR+R
Sbjct: 195 LRRR 198


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           +  KFR      C  +    +GF   G +L  +E   RP+   + NQ N N  C K YAS
Sbjct: 73  DNTKFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPL---IKNQVNNNFCCRKSYAS 126

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVV-AGLPPHRYQM 15
           V EA  VSSTD E+D+SV DE+ EL+ E++KEE   K  A  +RK +++ +G+   +YQ 
Sbjct: 127 VAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEK--KQFAFRRRKQRMLTSGMGHRKYQT 184

Query: 14  LRKR 3
           L++R
Sbjct: 185 LKRR 188


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/104 (43%), Positives = 63/104 (60%)
 Frame = -3

Query: 314 EVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEAELVSSTDYEDDLSVF 135
           EVG  R G  L +E+   R   G L N    N  CP+GYA+V EA  VSSTD E+D+S+ 
Sbjct: 97  EVGSGRIGEILNHEDYMGRTSFGVLKND---NFWCPRGYATVAEA--VSSTDVEEDVSIV 151

Query: 134 DEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
           +EIQEL++EM+KEE R       + + +V  G+   +Y+ML+ R
Sbjct: 152 EEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMR 195


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/104 (43%), Positives = 63/104 (60%)
 Frame = -3

Query: 314 EVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEAELVSSTDYEDDLSVF 135
           EVG  R G  L +E+   R   G L N    N  CP+GYA+V EA  VSSTD E+D+S+ 
Sbjct: 97  EVGSGRIGEILNHEDYMGRTSFGVLKND---NFWCPRGYATVAEA--VSSTDVEEDVSIV 151

Query: 134 DEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
           +EIQEL++EM+KEE R       + + +V  G+   +Y+ML+ R
Sbjct: 152 EEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMR 195


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/104 (43%), Positives = 63/104 (60%)
 Frame = -3

Query: 314 EVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEAELVSSTDYEDDLSVF 135
           EVG  R G  L +E+   R   G L N    N  CP+GYA+V EA  VSSTD E+D+S+ 
Sbjct: 97  EVGSGRIGEILNHEDYMGRTSFGVLKND---NFWCPRGYATVAEA--VSSTDVEEDVSIV 151

Query: 134 DEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
           +EIQEL++EM+KEE R       + + +V  G+   +Y+ML+ R
Sbjct: 152 EEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMR 195


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLN-VQCPKGYA 195
           +  KFR      C  +    +GF   G +L  +E   RP+   L NQ N N   C K YA
Sbjct: 73  DNTKFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPL---LKNQVNSNDFCCRKSYA 126

Query: 194 SVVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVV-AGLPPHRYQ 18
           SV EA  VSSTD E+D+SV DE+QEL+ E++KEE   K  A  +RK +++ +G+   +YQ
Sbjct: 127 SVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEK--KQFAFRRRKQRMLTSGMGHRKYQ 184

Query: 17  MLRKR 3
            L++R
Sbjct: 185 TLKRR 189


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
           gi|223526525|gb|EEF28787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQ------- 213
           +K K  P  L  C  L    VGFCR G  +  E+   +P  G + N+ N N         
Sbjct: 40  DKCKLSP--LYACSSL----VGFCRLGEIVPYEDFMGKPGFGLVGNKDNSNSSHMSMCNG 93

Query: 212 ------CPKGYASVVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPK 51
                  P+GY SV EA + SSTD E+D+SV +E+QEL++EMR+EE R K   + +RK +
Sbjct: 94  YLCSGFYPRGYVSVAEA-VSSSTDVEEDVSVVEEVQELLQEMRREEAREK--ELIRRKER 150

Query: 50  VVAGLPPHRYQMLRKR 3
              G+   +YQML+KR
Sbjct: 151 ---GMGSKKYQMLKKR 163


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/104 (42%), Positives = 62/104 (59%)
 Frame = -3

Query: 314 EVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEAELVSSTDYEDDLSVF 135
           EVG  R G  L +E+   R   G L N    N  CP+GYA+V EA  VSSTD E+D+S+ 
Sbjct: 97  EVGSGRIGEILNHEDYMGRTSFGVLKND---NFWCPRGYATVAEA--VSSTDVEEDVSIV 151

Query: 134 DEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
           +EIQEL++EM+KE+     R     + +V  G+   +Y+ML+ R
Sbjct: 152 EEIQELLQEMKKEQQSGGGR----NRRRVARGMGSGKYRMLKMR 191


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYAS 192
           +K   R F    C    F E+GF   G F   +E   RP+   + +Q + N  C K YAS
Sbjct: 69  DKRILRSFIPVSCSNSGFLEMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYAS 125

Query: 191 VVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRA-KWRAIHQRKPKVVAGLPPHRYQM 15
           V EA  VSSTD E+D+SV  E+QEL+ E++KEE +   +R  +QR   + +G+   +Y  
Sbjct: 126 VAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRNQR--LLTSGIDRRKYPA 183

Query: 14  LRKR 3
           L++R
Sbjct: 184 LKRR 187


>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
          Length = 1021

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
 Frame = -3

Query: 359 FRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASVVEA 180
           FRP  +       F ++G+ R        +   RP  GFL ++   +   P+ Y +  EA
Sbjct: 80  FRPSVIGPISSSGFHDMGYSRTCEIPAPGDFSGRPGFGFLKDECCFHRFSPRSYVNAAEA 139

Query: 179 ELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPK--VVAGLPPHRYQMLRK 6
             VSSTD E+D SV DE+QEL+ EM+KEE + K   +H R+ K     G+   +YQ L++
Sbjct: 140 --VSSTDIEEDASVVDEVQELLREMKKEEKKEK---VHLRRVKRQEDLGMLEKKYQSLKR 194

Query: 5   R 3
           R
Sbjct: 195 R 195


>ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutrema salsugineum]
           gi|557101180|gb|ESQ41543.1| hypothetical protein
           EUTSA_v10012544mg [Eutrema salsugineum]
          Length = 1030

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
 Frame = -3

Query: 341 SLCKKLRFS-------------EVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKG 201
           SL KKLRF              E+GF R  G    EE+  R    F  N    N    + 
Sbjct: 74  SLSKKLRFRCSVFGSFSDSGCHEMGFSRLSGVTRPEELPGRVGLRFSKNDSYFNGSFARR 133

Query: 200 YASVVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRY 21
           Y SV  AE +SSTD E++ SV DE+QEL++EM+KE+ R   R+   +K + V G+   +Y
Sbjct: 134 YTSV--AEEISSTDVEEEPSVVDEVQELLKEMKKEQKREDHRSWRMKKQEHV-GMGRGKY 190

Query: 20  QMLRKR 3
           + L +R
Sbjct: 191 RNLWRR 196


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
 Frame = -3

Query: 305 FCRKGGFLGNEEMGERPISGFLSNQPNLNVQ-----CPKGYASVVEAELVSSTDYEDDLS 141
           F R G    +E+   +P  GFL N  + N       CP+GY SV EA  VSSTD ED++ 
Sbjct: 93  FRRIGEISTHEDYMGKPSFGFLRNGDSSNGNLCSGLCPRGYVSVAEA--VSSTDVEDNVV 150

Query: 140 VFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLRKR 3
           V +E+QEL+++ RKEE + K     +R+     G+   +Y+ LR+R
Sbjct: 151 VDEELQELLQDTRKEEEKEK-DFRRRRRLHANRGMGSGKYKALRRR 195


>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
           gi|550320354|gb|ERP51329.1| hypothetical protein
           POPTR_0017s14590g [Populus trichocarpa]
          Length = 987

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
 Frame = -3

Query: 371 EKLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQ-----CP 207
           EKLKF     +   +L F  +G         +E+   +P   FL N  + N       CP
Sbjct: 40  EKLKFHSLN-NTSPRLSFRAIGEIST-----HEDFMGKPRFIFLRNSDSTNGNRCAGFCP 93

Query: 206 KGYASVVEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPH 27
           +GY SVVEA  VSSTD ED++   DE+QEL+ EMRKEE + +     +R+     G+   
Sbjct: 94  RGYVSVVEA--VSSTDVEDNVYGADEVQELLPEMRKEEEKEEH---FRRRLHANPGIGSR 148

Query: 26  RYQMLRKR 3
           ++++LR+R
Sbjct: 149 KHRVLRRR 156


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 1262

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
 Frame = -3

Query: 212 CPKGYASVVEA----ELVSSTDYEDDLSVFDEIQELVEEMRKEENRA---KWRAIHQRKP 54
           CPKGYASV EA    +  SSTD E+++ V DE+QE+++EM+KE+ R    +WR    R  
Sbjct: 361 CPKGYASVAEAISSTDASSSTDAEEEVCVVDELQEILKEMKKEDKRQSAYRWRIEQAR-- 418

Query: 53  KVVAGLPPHRYQMLRKR 3
             V G+   +Y MLR+R
Sbjct: 419 --VRGMGEGKYLMLRRR 433


>gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis]
          Length = 1093

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 46/122 (37%), Positives = 65/122 (53%)
 Frame = -3

Query: 368 KLKFRPFKLSLCKKLRFSEVGFCRKGGFLGNEEMGERPISGFLSNQPNLNVQCPKGYASV 189
           KLK RPF+L     L   EV   R   F            G L N    +V CP+G++SV
Sbjct: 78  KLKSRPFEL--VPGLTRGEVSV-RSSDF------------GNLRNPSGFSVFCPRGFSSV 122

Query: 188 VEAELVSSTDYEDDLSVFDEIQELVEEMRKEENRAKWRAIHQRKPKVVAGLPPHRYQMLR 9
            EA + S TD E+D+ V ++ QEL++++ KEE R + R   QR+  V  G+   RY+ L+
Sbjct: 123 AEA-VSSPTDVEEDVLVDEDFQELMQDVGKEEKR-RVRHWQQRRLAVARGMGQSRYEFLK 180

Query: 8   KR 3
           KR
Sbjct: 181 KR 182