BLASTX nr result

ID: Achyranthes23_contig00045140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00045140
         (235 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar...    61   2e-07
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9...    59   7e-07
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b...    58   1e-06
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9...    57   2e-06
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr...    57   2e-06
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9...    57   3e-06
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]          57   3e-06
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9...    55   7e-06

>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
           gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
           [Populus trichocarpa]
          Length = 1067

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLS 113
           ++LR S ERQGAEFISFD V GEWKF V HFSRFGLS
Sbjct: 178 EKLRESMERQGAEFISFDPVIGEWKFLVCHFSRFGLS 214


>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
           tuberosum]
          Length = 1033

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/76 (40%), Positives = 41/76 (53%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLSXXXXXXXXXXXXXXXXXXXXXXX 182
           ++LR+  ERQGA FISFD  +GEWKF V+HFSRFGL                        
Sbjct: 149 EKLRLRTERQGARFISFDPSNGEWKFFVQHFSRFGL------------------------ 184

Query: 183 XXXXXNDDEDEEDMVL 230
                ND+E++EDM++
Sbjct: 185 -----NDEEEDEDMII 195


>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
          Length = 1037

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGL 110
           ++LR   ERQGA FISF+ ++GEWKFSV+HFSRFGL
Sbjct: 153 EKLRCRTERQGARFISFNPLNGEWKFSVQHFSRFGL 188


>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
           sinensis]
          Length = 1041

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLS 113
           ++++   ERQGA F+SFD VSGEWKF V HFSRFGLS
Sbjct: 154 KKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLS 190


>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
           gi|557529570|gb|ESR40820.1| hypothetical protein
           CICLE_v10024784mg [Citrus clementina]
          Length = 1041

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLS 113
           ++++   ERQGA F+SFD VSGEWKF V HFSRFGLS
Sbjct: 154 KKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLS 190


>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
           lycopersicum]
          Length = 1012

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 41/76 (53%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLSXXXXXXXXXXXXXXXXXXXXXXX 182
           ++LR+  E+QGA FISFD  +GEWKF V+HFSRFGL                        
Sbjct: 149 EKLRLRTEKQGARFISFDLSNGEWKFFVQHFSRFGL------------------------ 184

Query: 183 XXXXXNDDEDEEDMVL 230
                ND+E++EDM++
Sbjct: 185 -----NDEEEDEDMII 195


>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
          Length = 948

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLS 113
           ++LR S +RQGA+FISFD  +GEWKF   HFSRFGLS
Sbjct: 176 EKLRRSTDRQGAQFISFDPENGEWKFLAHHFSRFGLS 212


>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
           vinifera]
          Length = 1041

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +3

Query: 3   QRLRVSAERQGAEFISFDEVSGEWKFSVKHFSRFGLS 113
           ++LR+  +RQGA+FISF+  +GEWKF V HFSRFGLS
Sbjct: 154 EKLRLCTKRQGADFISFNPSNGEWKFLVHHFSRFGLS 190


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