BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00043473
         (793 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN88404.1| polyprotein [Strawberry latent ringspot virus]         325   8e-87
gb|ADN88406.1| polyprotein [Strawberry latent ringspot virus]         323   5e-86
gb|ADN88402.1| polyprotein [Strawberry latent ringspot virus]         322   9e-86
ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot...   319   8e-85
gb|ADN88403.1| polyprotein [Strawberry latent ringspot virus]         319   8e-85
gb|ADN88405.1| polyprotein [Strawberry latent ringspot virus]         318   1e-84
emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot v...   303   3e-80
ref|YP_227376.1| small coat protein [Strawberry latent ringspot ...   253   5e-65
ref|YP_227375.1| large coat protein [Strawberry latent ringspot ...    73   1e-10

>gb|ADN88404.1| polyprotein [Strawberry latent ringspot virus]
          Length = 712

 Score =  325 bits (834), Expect = 8e-87
 Identities = 154/263 (58%), Positives = 191/263 (72%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISDT++KGSV++RYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 434  PLHISDTTKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 489

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL QK FRL+TI+KW  SGFL+FP+TPS H+P+ AG FE  +EQ  PLMH
Sbjct: 490  TEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFFPMTPSSHMPKLAGTFEGEVEQHSPLMH 549

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R + F A +L  IL  PCF +  TF  ++
Sbjct: 550  RSQENAQWCGSLTYYLSIRYSGATPQGVLPMRPVCFGATVLDNILDKPCFVEKDTFIQVM 609

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 610  PMADPRETIYLPTTESVAFYETPPRRWVNTHFGATESYGVRTCPAWVLLQFPNEEASHLG 669

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            VRDVSLWVEP+I +RH +GGFP+
Sbjct: 670  VRDVSLWVEPNISFRHAVGGFPI 692


>gb|ADN88406.1| polyprotein [Strawberry latent ringspot virus]
          Length = 712

 Score =  323 bits (827), Expect = 5e-86
 Identities = 152/263 (57%), Positives = 190/263 (72%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISDT++KGSV++RYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 434  PLHISDTTKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 489

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL QK FRL+TI+KW  SGFL+FP+TPS H+P+  G FE  +EQ  PLMH
Sbjct: 490  MEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFFPMTPSSHMPKLVGTFEGEVEQHSPLMH 549

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R + F A +L  IL  PCF +  TF  ++
Sbjct: 550  RSQENAQWCGSLTYYLSIRYSGATPQGVLPMRPVCFGATVLDNILGKPCFVEKDTFIQVM 609

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 610  PMADPRETIYLPTTESVAFYETPPRRWVNTHFGATESYGVRTCPAWVLLQFPNEEASHLG 669

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            VRD+SLWVEP+I +RH +GGFP+
Sbjct: 670  VRDISLWVEPNISFRHAVGGFPI 692


>gb|ADN88402.1| polyprotein [Strawberry latent ringspot virus]
          Length = 712

 Score =  322 bits (825), Expect = 9e-86
 Identities = 151/263 (57%), Positives = 191/263 (72%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISDT++KGSV++R+LGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 434  PLHISDTTKKGSVMIRFLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 489

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL QK FRL+TI+KW  SGFL+FP+TPS H+P+ AG FE  +EQ  PLMH
Sbjct: 490  TEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFFPMTPSSHMPKLAGTFEGEVEQHSPLMH 549

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT + VLP R + F A +L  IL  PCF +  TF  ++
Sbjct: 550  RSQENAQWCGSLTYYLSIRYSGATPRGVLPMRPVCFGATVLDNILDKPCFVEKDTFIQVM 609

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 610  PMADPRETIYLPTTESVAFYETPPRRWVNTHFGATESYGVRTCPAWVLLQFPNEEASHLG 669

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            +RDVSLWVEP+I +RH +GGFP+
Sbjct: 670  IRDVSLWVEPNISFRHAVGGFPI 692


>ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
            gi|58040999|gb|AAW63129.1| 109 kDa polyprotein
            [Strawberry latent ringspot virus]
          Length = 989

 Score =  319 bits (817), Expect = 8e-85
 Identities = 149/263 (56%), Positives = 187/263 (71%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISDT++KGSV+VRYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 711  PLHISDTTKKGSVMVRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 766

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL Q+ FRL+TI+KW  SGFL+FP TPS H+P+  G FE  +EQ  PLMH
Sbjct: 767  VEPPLFRLPLGLLQRRFRLLTISKWPKSGFLFFPTTPSSHIPKLVGTFEGEVEQHSPLMH 826

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R +   A +L  I+  PCF +  TF  ++
Sbjct: 827  RSQENAQWSGSLTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKPCFIEKDTFVQVM 886

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 887  PMADPRETIYLPTTDSVASYVTPPRRWVNTHFGATEMYGVRTCPAWVLLQFPNEEASHLG 946

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            VRD+SLWVEP + +RH +GGFP+
Sbjct: 947  VRDISLWVEPKVTFRHAVGGFPI 969


>gb|ADN88403.1| polyprotein [Strawberry latent ringspot virus]
          Length = 712

 Score =  319 bits (817), Expect = 8e-85
 Identities = 152/263 (57%), Positives = 188/263 (71%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISD ++KGSV++RYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 434  PLHISDATKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 489

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL QK FRL+TI+KW  SGFL+ P+TPS H+P+ AG FE  +EQ  PLMH
Sbjct: 490  VEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFLPMTPSSHIPKLAGTFEGEVEQHSPLMH 549

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R + F A +L  IL  PCF +  TF  ++
Sbjct: 550  RSQENAQWCGSLTYYLSIRYSGATPQGVLPLRPVCFGATVLDNILGKPCFVEKDTFIQVM 609

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+    +T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 610  PMADPGETVYLPTTESIAFYETPPRRWVNTHFGATESYGVRTCPAWVLLQFPNEEASHLG 669

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            VRDVSLWVEP+I YRH +GGFP+
Sbjct: 670  VRDVSLWVEPNISYRHAVGGFPI 692


>gb|ADN88405.1| polyprotein [Strawberry latent ringspot virus]
          Length = 712

 Score =  318 bits (815), Expect = 1e-84
 Identities = 152/263 (57%), Positives = 187/263 (71%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISD ++KGSV++RYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 434  PLHISDATKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTFDW 489

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP   R+PLGL QK FRL+TI+KW  SGFL+ P+TPS H+P+ AG FE  +EQ  PLMH
Sbjct: 490  VEPPSLRLPLGLLQKKFRLLTISKWPKSGFLFLPMTPSSHIPKLAGTFEGEVEQHSPLMH 549

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R + F A +L  IL  PCF +  TF  ++
Sbjct: 550  RSQENAQWCGSLTYYLSIRYSGATPQGVLPLRPVCFGATVLDNILGKPCFVEKDTFIQVM 609

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+    +T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 610  PMADPGETVYLPTTESIAFYETPPRRWVNTHFGATESYGVRTCPAWVLLQFPNEEASHLG 669

Query: 71   VRDVSLWVEPDIEYRHPMGGFPL 3
            VRDVSLWVEP+I YRH +GGFP+
Sbjct: 670  VRDVSLWVEPNISYRHAVGGFPI 692


>emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot virus]
          Length = 890

 Score =  303 bits (777), Expect = 3e-80
 Identities = 144/250 (57%), Positives = 177/250 (70%)
 Frame = -3

Query: 791  PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLVPNVVASGGPVIKVGTLEW 612
            PLHISDT++ GSV+VRYLGLED +Y++P TS+GRLNP TTLV    ASG PV++VGT +W
Sbjct: 588  PLHISDTTKTGSVMVRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDW 643

Query: 611  EEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGFEASLEQQCPLMH 432
             EP + R+PLGL QK FRL+TI+KW  SGFL+FP TPS H+P+ AG FE  +EQ  PLMH
Sbjct: 644  VEPLLFRLPLGLLQKRFRLLTISKWPKSGFLFFPTTPSSHIPKLAGTFEGEVEQHSPLMH 703

Query: 431  RSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAPCFADNSTFKPLL 252
            RSQEN QW G+L Y+L+ R  GAT Q VLP R +   A +L  I+  PCF +  TF  ++
Sbjct: 704  RSQENAQWSGSLTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKPCFIEKDTFVQVM 763

Query: 251  PLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLH 72
            P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVLLQFP +  + L 
Sbjct: 764  PMADPRETIYLPTTDSIASYETPPRRWVNTHFGATETYGVRTCPAWVLLQFPNEEASHLG 823

Query: 71   VRDVSLWVEP 42
            VRD+SLWVEP
Sbjct: 824  VRDISLWVEP 833


>ref|YP_227376.1| small coat protein [Strawberry latent ringspot virus]
          Length = 235

 Score =  253 bits (646), Expect = 5e-65
 Identities = 115/215 (53%), Positives = 146/215 (67%)
 Frame = -3

Query: 647 GGPVIKVGTLEWEEPFISRVPLGLRQKTFRLMTINKWSPSGFLYFPVTPSVHLPRTAGGF 468
           G PV++VGT +W EP + R+PLGL Q+ FRL+TI+KW  SGFL+FP TPS H+P+  G F
Sbjct: 1   GAPVVQVGTSDWVEPPLFRLPLGLLQRRFRLLTISKWPKSGFLFFPTTPSSHIPKLVGTF 60

Query: 467 EASLEQQCPLMHRSQENCQWRGTLRYHLTARLEGATEQFVLPHRSLTFSAVLLSKILPAP 288
           E  +EQ  PLMHRSQEN QW G+L Y+L+ R  GAT Q VLP R +   A +L  I+  P
Sbjct: 61  EGEVEQHSPLMHRSQENAQWSGSLTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKP 120

Query: 287 CFADNSTFKPLLPLLSVRDTFSLGQDYPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVL 108
           CF +  TF  ++P+   R+T  L        + TPP RW NTHFGATE Y  RTCP WVL
Sbjct: 121 CFIEKDTFVQVMPMADPRETIYLPTTDSVASYVTPPRRWVNTHFGATEMYGVRTCPAWVL 180

Query: 107 LQFPPKTMAQLHVRDVSLWVEPDIEYRHPMGGFPL 3
           LQFP +  + L VRD+SLWVEP + +RH +GGFP+
Sbjct: 181 LQFPNEEASHLGVRDISLWVEPKVTFRHAVGGFPI 215


>ref|YP_227375.1| large coat protein [Strawberry latent ringspot virus]
          Length = 388

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -3

Query: 791 PLHISDTSRKGSVLVRYLGLEDLDYLEPATSIGRLNPKTTLV 666
           PLHISDT++KGSV+VRYLGLED +Y++P TS+GRLNP TTLV
Sbjct: 345 PLHISDTTKKGSVMVRYLGLEDCEYIQPTTSLGRLNPATTLV 386