BLASTX nr result
ID: Achyranthes23_contig00042488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00042488
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_904110.1| photosystem I assembly protein Ycf4 [Amborella ... 62 4e-12
gb|AEJ10254.1| photosystem I assembly protein ycf4 [Navia saxico... 63 4e-12
gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulve... 62 6e-12
gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus u... 62 6e-12
gb|AEJ10256.1| photosystem I assembly protein ycf4 [Neoregelia c... 62 6e-12
emb|CAN82382.1| hypothetical protein VITISV_017653 [Vitis vinifera] 49 6e-12
gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast)... 64 1e-11
ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chlorop... 64 1e-11
gb|ADD30789.1| photosystem I assembly protein ycf4 [Staphylea co... 64 1e-11
gb|AEJ10260.1| photosystem I assembly protein ycf4 [Pitcairnia f... 61 1e-11
gb|AEJ10244.1| photosystem I assembly protein ycf4 [Fosterella c... 61 1e-11
ref|YP_001936528.1| photosystem I assembly protein Ycf4 [Fagopyr... 60 3e-11
gb|AEJ10267.1| photosystem I assembly protein ycf4 [Thamnochortu... 60 4e-11
ref|YP_001542540.1| photosystem I assembly protein ycf4 [Cuscuta... 60 7e-11
gb|AGW04677.1| photosystem I assembly protein ycf4 [Matelea bifl... 61 8e-11
gb|AGW04374.1| photosystem I assembly protein ycf4 [Araujia seri... 61 8e-11
gb|AER52423.1| photosystem I assembly protein ycf4 [Asclepias al... 61 8e-11
gb|AEJ10234.1| photosystem I assembly protein ycf4 [Brocchinia m... 57 1e-10
ref|YP_008578550.1| photosystem I assembly protein ycf4 (chlorop... 60 2e-10
gb|AGW04527.1| photosystem I assembly protein ycf4 [Eustegia min... 61 2e-10
>ref|NP_904110.1| photosystem I assembly protein Ycf4 [Amborella trichopoda]
gi|51316669|sp|Q70XZ2.1|YCF4_AMBTC RecName:
Full=Photosystem I assembly protein Ycf4
gi|34481640|emb|CAD45118.1| Ycf4 protein [Amborella
trichopoda]
Length = 235
Score = 61.6 bits (148), Expect(2) = 4e-12
Identities = 31/51 (60%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SN CWA YLGRNLISLFP QQILFFPQGIV
Sbjct: 15 GSRKTSNLCWACILFLGSLGFLLVGTSSYLGRNLISLFPSQQILFFPQGIV 65
Score = 35.0 bits (79), Expect(2) = 4e-12
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
MNWRSERIWIELI G K
Sbjct: 1 MNWRSERIWIELITGSRK 18
>gb|AEJ10254.1| photosystem I assembly protein ycf4 [Navia saxicola]
gi|338826218|gb|AEJ10262.1| photosystem I assembly
protein ycf4 [Puya laxa]
Length = 183
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQILFFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQILFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulverulentus]
Length = 184
Score = 62.0 bits (149), Expect(2) = 6e-12
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQI+FFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 6e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELITGSRKTSNF 22
>gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus uniflorus]
Length = 184
Score = 62.0 bits (149), Expect(2) = 6e-12
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQI+FFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 6e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELITGSRKTSNF 22
>gb|AEJ10256.1| photosystem I assembly protein ycf4 [Neoregelia carolinae]
Length = 183
Score = 62.0 bits (149), Expect(2) = 6e-12
Identities = 30/51 (58%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQI+FFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQIIFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 6e-12
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>emb|CAN82382.1| hypothetical protein VITISV_017653 [Vitis vinifera]
Length = 175
Score = 48.9 bits (115), Expect(2) = 6e-12
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*FLLGLYSFFWFIRILIGWN 317
M+WRSERIWIEL G+SKN+ FIR+LIGWN
Sbjct: 1 MSWRSERIWIELXNGVSKNK-----------FIRVLIGWN 29
Score = 47.0 bits (110), Expect(2) = 6e-12
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 325 YLGRNLISLFPPQQILFFPQGIV 393
YLGRNLISLFP QQI+FFPQGIV
Sbjct: 32 YLGRNLISLFPSQQIIFFPQGIV 54
>gb|AEQ36949.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
stramonium]
Length = 184
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRKISN CWA YLGRNLIS FPPQQI+FFPQGIV
Sbjct: 15 GSRKISNLCWAVILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
M WRSE IWIELI G K
Sbjct: 1 MTWRSEHIWIELITGSRK 18
>ref|YP_006503802.1| photosystem I assembly protein Ycf4 (chloroplast) [Datura
stramonium] gi|350996523|gb|AEQ37034.1| photosystem I
assembly protein Ycf4 [Datura stramonium]
Length = 184
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRKISN CWA YLGRNLIS FPPQQI+FFPQGIV
Sbjct: 15 GSRKISNLCWAFILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
M WRSE IWIELI G K
Sbjct: 1 MTWRSEHIWIELITGSRK 18
>gb|ADD30789.1| photosystem I assembly protein ycf4 [Staphylea colchica]
Length = 184
Score = 63.9 bits (154), Expect(2) = 1e-11
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SN CWA YLGRNLISLFPPQQI+FFPQGIV
Sbjct: 15 GSRKTSNLCWAFILFLGSLGFLFVGVSSYLGRNLISLFPPQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
M+WRS+ IWIELI G K
Sbjct: 1 MSWRSDHIWIELIAGSRK 18
>gb|AEJ10260.1| photosystem I assembly protein ycf4 [Pitcairnia feliciana]
Length = 183
Score = 60.8 bits (146), Expect(2) = 1e-11
Identities = 30/51 (58%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQI FFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQITFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 1e-11
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>gb|AEJ10244.1| photosystem I assembly protein ycf4 [Fosterella caulescens]
Length = 183
Score = 60.8 bits (146), Expect(2) = 1e-11
Identities = 30/51 (58%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLGRNLIS+FP QQI FFPQGIV
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLAVGTSSYLGRNLISVFPSQQITFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 1e-11
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>ref|YP_001936528.1| photosystem I assembly protein Ycf4 [Fagopyrum esculentum subsp.
ancestrale] gi|166065368|gb|ABY79743.1| photosystem I
assembly protein ycf4 [Fagopyrum esculentum subsp.
ancestrale]
Length = 184
Score = 60.1 bits (144), Expect(2) = 3e-11
Identities = 30/51 (58%), Positives = 30/51 (58%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SN CWA YLGRNLISLFP QQI FFPQGIV
Sbjct: 15 GSRKTSNLCWAFILFLGSVGFLLVGTSSYLGRNLISLFPSQQIFFFPQGIV 65
Score = 33.5 bits (75), Expect(2) = 3e-11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
MNW+SERIWIELI G K
Sbjct: 1 MNWQSERIWIELIRGSRK 18
>gb|AEJ10267.1| photosystem I assembly protein ycf4 [Thamnochortus insignis]
Length = 185
Score = 60.1 bits (144), Expect(2) = 4e-11
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNFCWA YLG+NLI LFP QQILFFPQG+V
Sbjct: 15 GSRKTSNFCWACILFLGSLGFLMVGISSYLGKNLILLFPSQQILFFPQGVV 65
Score = 33.1 bits (74), Expect(2) = 4e-11
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIEL+ G K F
Sbjct: 1 MNWRSEHIWIELLKGSRKTSNF 22
>ref|YP_001542540.1| photosystem I assembly protein ycf4 [Cuscuta exaltata]
gi|172048133|sp|A8W3D3.1|YCF4_CUSEX RecName:
Full=Photosystem I assembly protein Ycf4
gi|158938687|gb|ABW83704.1| photosystem I assembly
protein ycf4 [Cuscuta exaltata]
Length = 184
Score = 60.5 bits (145), Expect(2) = 7e-11
Identities = 30/51 (58%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRKISN CWA YLGRNLIS FP QQI+FFPQGIV
Sbjct: 15 GSRKISNLCWAFILFLGSLGFFLVGTSSYLGRNLISFFPLQQIIFFPQGIV 65
Score = 32.0 bits (71), Expect(2) = 7e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISK 251
M+WRSE IWIELI G K
Sbjct: 1 MSWRSEHIWIELIAGSRK 18
>gb|AGW04677.1| photosystem I assembly protein ycf4 [Matelea biflora]
Length = 184
Score = 61.2 bits (147), Expect(2) = 8e-11
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1
Query: 244 SRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
SRKISNFCWA YLGRNLIS FP QQI+FFPQGIV
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 198 MNWRSERIWIELI 236
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AGW04374.1| photosystem I assembly protein ycf4 [Araujia sericifera]
gi|544187046|gb|AGW04985.1| photosystem I assembly
protein ycf4 [Vincetoxicum rossicum]
Length = 184
Score = 61.2 bits (147), Expect(2) = 8e-11
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1
Query: 244 SRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
SRKISNFCWA YLGRNLIS FP QQI+FFPQGIV
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 198 MNWRSERIWIELI 236
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AER52423.1| photosystem I assembly protein ycf4 [Asclepias albicans]
gi|355331817|gb|AER52505.1| photosystem I assembly
protein ycf4 [Asclepias albicans]
gi|355331900|gb|AER52587.1| photosystem I assembly
protein ycf4 [Asclepias coulteri]
gi|355331983|gb|AER52669.1| photosystem I assembly
protein ycf4 [Asclepias cutleri]
gi|355332066|gb|AER52751.1| photosystem I assembly
protein ycf4 [Asclepias cutleri]
gi|355332148|gb|AER52832.1| photosystem I assembly
protein ycf4 [Asclepias leptopus]
gi|355332231|gb|AER52914.1| photosystem I assembly
protein ycf4 [Asclepias macrotis]
gi|355332312|gb|AER52994.1| photosystem I assembly
protein ycf4 [Asclepias macrotis]
gi|355332391|gb|AER53072.1| photosystem I assembly
protein ycf4 [Asclepias masonii]
gi|355332474|gb|AER53154.1| photosystem I assembly
protein ycf4 [Asclepias subaphylla]
gi|355332557|gb|AER53236.1| photosystem I assembly
protein ycf4 [Asclepias subaphylla]
gi|355332636|gb|AER53314.1| photosystem I assembly
protein ycf4 [Asclepias subulata]
gi|355332719|gb|AER53396.1| photosystem I assembly
protein ycf4 [Asclepias subulata]
gi|355332802|gb|AER53478.1| photosystem I assembly
protein ycf4 [Asclepias albicans x Asclepias subulata]
Length = 183
Score = 61.2 bits (147), Expect(2) = 8e-11
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1
Query: 244 SRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
SRKISNFCWA YLGRNLIS FP QQI+FFPQGIV
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 198 MNWRSERIWIELI 236
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AEJ10234.1| photosystem I assembly protein ycf4 [Brocchinia micrantha]
Length = 184
Score = 57.4 bits (137), Expect(2) = 1e-10
Identities = 29/51 (56%), Positives = 31/51 (60%)
Frame = +1
Query: 241 GSRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
GSRK SNF WA YLGRNLIS+FP QQI+FFPQGIV
Sbjct: 15 GSRKTSNFGWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFFPQGIV 65
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 198 MNWRSERIWIELIGGISKNQ*F 263
MNWRSE IWIELI G K F
Sbjct: 1 MNWRSEHIWIELIRGSRKTSNF 22
>ref|YP_008578550.1| photosystem I assembly protein ycf4 (chloroplast) [Asclepias nivea]
gi|544187137|gb|AGW05075.1| photosystem I assembly
protein ycf4 (chloroplast) [Asclepias nivea]
Length = 183
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = +1
Query: 244 SRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
SRKISNFCWA YLGRNLIS FP Q+I+FFPQGIV
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQEIIFFPQGIV 65
Score = 30.8 bits (68), Expect(2) = 2e-10
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 198 MNWRSERIWIELI 236
MNWRSE IWIELI
Sbjct: 1 MNWRSEHIWIELI 13
>gb|AGW04527.1| photosystem I assembly protein ycf4 [Eustegia minuta]
Length = 184
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1
Query: 244 SRKISNFCWAXXXXXXXXXXXXXXXXXYLGRNLISLFPPQQILFFPQGIV 393
SRKISNFCWA YLGRNLIS FP QQI+FFPQGIV
Sbjct: 16 SRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPSQQIIFFPQGIV 65
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 198 MNWRSERIWIEL 233
MNWRSE IWIEL
Sbjct: 1 MNWRSEHIWIEL 12