BLASTX nr result
ID: Achyranthes23_contig00042040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00042040
(328 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY12080.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 72 2e-19
gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 73 9e-19
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 73 6e-18
ref|XP_006359791.1| PREDICTED: uncharacterized protein LOC102577... 70 7e-18
ref|XP_004250826.1| PREDICTED: uncharacterized mitochondrial pro... 70 1e-17
ref|XP_006359191.1| PREDICTED: uncharacterized protein LOC102580... 72 2e-17
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 75 2e-17
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 69 3e-17
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 72 3e-17
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 71 5e-17
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 69 6e-17
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 68 8e-17
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 70 8e-17
ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598... 69 1e-16
ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonin... 68 2e-16
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 70 1e-15
ref|XP_006338010.1| PREDICTED: F-box protein CPR30-like [Solanum... 68 1e-15
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 69 1e-15
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 64 1e-15
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 69 1e-15
>gb|EOY12080.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 523
Score = 72.0 bits (175), Expect(2) = 2e-19
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
+SY V LSQFM +PR PH NA+ LRY+ A QG+LL S + L+L+A+ D DW CP
Sbjct: 318 ISYVVHLLSQFMHNPRQPHLNAVFCELRYLKNAPGQGLLLPSNNSLSLRAYCDGDWAGCP 377
Query: 181 NIRR 192
RR
Sbjct: 378 TTRR 381
Score = 49.3 bits (116), Expect(2) = 2e-19
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 191 GYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
GYI+ G SP+SWR EAEYRAM++ +T++ W++RL
Sbjct: 385 GYIIFLGSSPISWRLKKQTVVSRSSAEAEYRAMATTSTKIIWLIRL 430
>gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1494
Score = 72.8 bits (177), Expect(2) = 9e-19
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
+SY V LSQFM +PR PH NA+ LRY+ A QG+LL S + L+L+A+ D+DW CP
Sbjct: 1155 ISYVVHLLSQFMHNPRQPHLNAVFRVLRYLKNAPGQGLLLPSNNSLSLRAYCDADWVGCP 1214
Query: 181 NIRR 192
RR
Sbjct: 1215 TTRR 1218
Score = 46.2 bits (108), Expect(2) = 9e-19
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 191 GYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
GYI+ G SP+SW+ EAEYRAM++ ++++ W++RL
Sbjct: 1222 GYIIFLGSSPISWQSKKQTVVSRSSAEAEYRAMATTSSKIIWLIRL 1267
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 73.2 bits (178), Expect(2) = 6e-18
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
LSY+V L+QFMQ+PR H++A + +RY+ G+ QGILL++ LTL+ + DSDW +CP
Sbjct: 1296 LSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCP 1355
Query: 181 NIRRLYSS 204
RR S+
Sbjct: 1356 LTRRSISA 1363
Score = 43.1 bits (100), Expect(2) = 6e-18
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ Y++L G SP+SW+ EAEYRAMS A E+ W+ +L
Sbjct: 1361 ISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKL 1408
>ref|XP_006359791.1| PREDICTED: uncharacterized protein LOC102577647 [Solanum tuberosum]
Length = 1046
Score = 70.1 bits (170), Expect(2) = 7e-18
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
+SY+VQ LSQFMQ PR PH A H LRY+ T GI + ++A+ DSDW ACP
Sbjct: 842 ISYSVQHLSQFMQDPREPHLQAAFHILRYLKADPTLGIFMSQDQSYNVKAYCDSDWAACP 901
Query: 181 NIRRLYS 201
+ R+ S
Sbjct: 902 DTRKSVS 908
Score = 45.8 bits (107), Expect(2) = 7e-18
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GYI+L G SP+SW+ EAEYRA+ A EL W+ RL
Sbjct: 907 VSGYIVLLGNSPLSWKSKKQETISLSSAEAEYRALRKVAGELVWLSRL 954
>ref|XP_004250826.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum lycopersicum]
Length = 195
Score = 70.1 bits (170), Expect(2) = 1e-17
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y VQ LSQ+MQ PR PH +A+ H LRY+ T G+ + S +QA+ DSDW ACP
Sbjct: 45 LAYGVQLLSQYMQDPREPHLHAVFHMLRYLKKDPTLGVFMSSAANFDVQAYCDSDWAACP 104
Query: 181 NIRRLYS 201
+ R+ S
Sbjct: 105 DSRKSVS 111
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GYI+L G SP+SW+ EAEYR++ ELTW+ RL
Sbjct: 110 VSGYIVLLGDSPISWKSKKQETISLSSAEAEYRSLRKVVGELTWLQRL 157
>ref|XP_006359191.1| PREDICTED: uncharacterized protein LOC102580453 [Solanum tuberosum]
Length = 402
Score = 72.4 bits (176), Expect(2) = 2e-17
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y+VQ LSQFMQSPR PH A H LRY+ T GI + + LT+ A+ DSDW ACP
Sbjct: 47 LTYSVQHLSQFMQSPREPHLKAAYHVLRYLKQDPTLGIFISNKYDLTVTAYCDSDWAACP 106
Query: 181 NIRRLYS 201
+ R+ S
Sbjct: 107 DSRKSVS 113
Score = 42.4 bits (98), Expect(2) = 2e-17
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GY++L G SPVSW+ +AEYRA+ EL W+ RL
Sbjct: 112 VSGYLVLMGDSPVSWKSKKQATMSLSSAKAEYRAVRQVVGELVWLERL 159
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 74.7 bits (182), Expect(2) = 2e-17
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = +1
Query: 7 YTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACPNI 186
Y+V+TLSQFM +PR PH+ A + LRY+ G+ QG+ L S + LTL AF DSDWG C
Sbjct: 1526 YSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMS 1585
Query: 187 RRLYS 201
RR S
Sbjct: 1586 RRSVS 1590
Score = 39.7 bits (91), Expect(2) = 2e-17
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWV 319
+ GY + G S +SW+ EAEYRAM++ ELTW+
Sbjct: 1589 VSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWL 1633
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1141
Score = 68.9 bits (167), Expect(2) = 3e-17
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
+SY V LSQFM +PR H NA+ LRY+ A QG+LL S + L+L+A+ D+DW CP
Sbjct: 981 ISYVVHLLSQFMHNPRQLHLNAVFCVLRYLKNAPGQGLLLPSNNSLSLRAYCDADWAGCP 1040
Query: 181 NIRR 192
RR
Sbjct: 1041 TTRR 1044
Score = 44.7 bits (104), Expect(2) = 3e-17
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 194 YILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
YI+ G SP+SWR EAEYRAM++ + E+ W+++L
Sbjct: 1049 YIIFLGSSPISWRSKKQTVVSRSSTEAEYRAMATISNEIIWLIQL 1093
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 71.6 bits (174), Expect(2) = 3e-17
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y+V LSQFM PR+ H+ A + +RY+ G QGILL + L+LQ + DSDW ACP
Sbjct: 894 LAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACP 953
Query: 181 NIRRLYS 201
RR S
Sbjct: 954 VTRRSLS 960
Score = 42.0 bits (97), Expect(2) = 3e-17
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWV 319
L G+++ G+SP+SW+ EAEYRAM++ EL W+
Sbjct: 959 LSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWL 1003
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 71.2 bits (173), Expect(2) = 5e-17
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y+V LSQFM PR+ H+ A + +RY+ G QGILL + L+LQ + DSDW ACP
Sbjct: 973 LAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACP 1032
Query: 181 NIRRLYS 201
RR S
Sbjct: 1033 VTRRSLS 1039
Score = 42.0 bits (97), Expect(2) = 5e-17
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWV 319
L G+++ G+SP+SW+ EAEYRAM++ EL W+
Sbjct: 1038 LSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWL 1082
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 68.9 bits (167), Expect(2) = 6e-17
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
LSY+V LSQFMQ+PR H A + +RY+ G+ QGILL S LTL+ + DSD+ +CP
Sbjct: 1286 LSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCP 1345
Query: 181 NIRRLYSS 204
RR S+
Sbjct: 1346 LTRRSLSA 1353
Score = 43.9 bits (102), Expect(2) = 6e-17
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
L Y++L G SP+SW+ EAEYRAMS A E+ W+ +L
Sbjct: 1351 LSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKL 1398
>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
lycopersicum]
Length = 1537
Score = 67.8 bits (164), Expect(2) = 8e-17
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
++++VQ LSQFMQ PR PH A H LRY+ +T G+ L T+QAF DSDW +C
Sbjct: 1333 IAFSVQHLSQFMQDPRAPHLQAAYHLLRYLKQDTTLGVQLSKNPDCTVQAFCDSDWASCS 1392
Query: 181 NIRRLYS 201
+ R+ S
Sbjct: 1393 DSRKSVS 1399
Score = 44.7 bits (104), Expect(2) = 8e-17
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GY++L G SP+SW+ EAEYR++ ELTW+ RL
Sbjct: 1398 VSGYLVLLGNSPISWKSKKQETVSLSSAEAEYRSLRKVVGELTWLHRL 1445
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 70.5 bits (171), Expect(2) = 8e-17
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y+V LSQFMQ PR+ H+ A + + Y+ G QGILL + L+LQ + DSDW ACP
Sbjct: 1256 LAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACP 1315
Query: 181 NIRRLYS 201
+R S
Sbjct: 1316 VTKRSLS 1322
Score = 42.0 bits (97), Expect(2) = 8e-17
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWV 319
L G+++ G+SP+SW+ EAEYRAM++ EL W+
Sbjct: 1321 LSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWL 1365
>ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum]
Length = 1453
Score = 68.6 bits (166), Expect(2) = 1e-16
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
++Y VQ LSQ+MQ PR PH A H LRY+ T GI + + +QAF DSDW +CP
Sbjct: 999 ITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQAFCDSDWASCP 1058
Query: 181 NIRRLYS 201
+ RR S
Sbjct: 1059 DSRRSVS 1065
Score = 68.6 bits (166), Expect(2) = 1e-16
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
++Y VQ LSQ+MQ PR PH A H LRY+ T GI + + +QAF DSDW +CP
Sbjct: 1249 ITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQAFCDSDWASCP 1308
Query: 181 NIRRLYS 201
+ RR S
Sbjct: 1309 DSRRSVS 1315
Score = 43.1 bits (100), Expect(2) = 1e-16
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GYI+L G SP+SW+ EAEYR++ EL W+ RL
Sbjct: 1064 VSGYIVLLGTSPISWKSKKQDTISLSSAEAEYRSLRKVVGELVWLHRL 1111
Score = 43.1 bits (100), Expect(2) = 1e-16
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GYI+L G SP+SW+ EAEYR++ EL W+ RL
Sbjct: 1314 VSGYIVLLGTSPISWKSKKQDTISLSSAEAEYRSLRKVVGELVWLHRL 1361
>ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Solanum tuberosum]
Length = 1471
Score = 67.8 bits (164), Expect(2) = 2e-16
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
++Y VQ LSQFMQ PR PH A H LRY+ T GI + S ++ A+ DSDW +CP
Sbjct: 1253 IAYGVQHLSQFMQDPREPHLQAAYHLLRYLKNDPTLGIFMSSAPNYSVHAYCDSDWESCP 1312
Query: 181 NIRRLYS 201
+ +R S
Sbjct: 1313 DFKRSVS 1319
Score = 43.5 bits (101), Expect(2) = 2e-16
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
+ GYI+L GK+P+SW+ EA YR++ EL WV RL
Sbjct: 1318 VSGYIVLLGKTPISWKSKKQETISLSSAEAAYRSLKKVVGELVWVDRL 1365
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 70.1 bits (170), Expect(2) = 1e-15
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
L+Y+V LSQFMQ PR+ H+ + + Y+ G QGILL + L+LQ + DSDW ACP
Sbjct: 924 LAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACP 983
Query: 181 NIRRLYS 201
RR S
Sbjct: 984 VTRRSLS 990
Score = 38.5 bits (88), Expect(2) = 1e-15
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWV 319
L G+++ G+S +SW+ EAEYRAM++ EL W+
Sbjct: 989 LSGWLVFLGQSHISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWL 1033
>ref|XP_006338010.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
Length = 630
Score = 67.8 bits (164), Expect(2) = 1e-15
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
+S+ VQTLSQF+Q+P+ H A + +RY+ QG+LL S + + A+ D+DW ACP
Sbjct: 50 ISFCVQTLSQFLQAPKQSHMEAAIRIVRYLKKEPGQGVLLSSNKNIDISAYCDTDWAACP 109
Query: 181 NIRR 192
N RR
Sbjct: 110 NSRR 113
Score = 40.8 bits (94), Expect(2) = 1e-15
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 191 GYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
GY++ G SP+ W+ EAEYR+++S EL W++ L
Sbjct: 117 GYVVKLGDSPIIWKSKKQTTVSKSSAEAEYRSLASTVAELIWIIGL 162
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
LSY V LSQFMQ+P V H+ A + +RY+ G+ QGI L S L + A+ DSD+ ACP
Sbjct: 1291 LSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACP 1350
Query: 181 NIRRLYSS 204
RR S+
Sbjct: 1351 LTRRSLSA 1358
Score = 39.7 bits (91), Expect(2) = 1e-15
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
L Y++ G SP+SW+ EAEYRAM+ EL W+ L
Sbjct: 1356 LSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKAL 1403
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 64.3 bits (155), Expect(2) = 1e-15
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
LSY+V LSQFMQ+PR H A + +R++ G+ QGILL++ +L L + DSD+ CP
Sbjct: 943 LSYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPGQGILLNADTELQLDVYCDSDFQTCP 1002
Query: 181 NIRRLYSS 204
RR S+
Sbjct: 1003 KTRRSLSA 1010
Score = 43.9 bits (102), Expect(2) = 1e-15
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
L Y++L G SP+SW+ EAEYRAMS A E+ W+ +L
Sbjct: 1008 LSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALREIKWLRKL 1055
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 1 LSYTVQTLSQFMQSPRVPHYNALVHTLRYVVGASTQGILLHSGDQLTLQAFLDSDWGACP 180
LSY V LSQFMQ+P V H+ A + +RY+ G+ QGI L S L + A+ DSD+ ACP
Sbjct: 571 LSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACP 630
Query: 181 NIRRLYSS 204
RR S+
Sbjct: 631 LTRRSLSA 638
Score = 39.7 bits (91), Expect(2) = 1e-15
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 185 LDGYILLFGKSPVSWRXXXXXXXXXXXXEAEYRAMSSAATELTWVVRL 328
L Y++ G SP+SW+ EAEYRAM+ EL W+ L
Sbjct: 636 LSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKAL 683