BLASTX nr result
ID: Achyranthes23_contig00041739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00041739
(568 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 48 2e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 47 2e-09
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 47 4e-09
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 47 4e-09
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 50 4e-08
gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japo... 47 7e-08
gb|AAU89136.1| F-box domain containing protein [Oryza sativa Jap... 47 7e-08
gb|EEC75888.1| hypothetical protein OsI_12930 [Oryza sativa Indi... 47 7e-08
gb|AAP44645.1| putative reverse transcriptase [Oryza sativa Japo... 47 7e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 39 3e-07
gb|EEC72753.1| hypothetical protein OsI_06384 [Oryza sativa Indi... 36 7e-06
gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japo... 36 7e-06
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A... 39 8e-06
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 48.1 bits (113), Expect(3) = 2e-09
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +3
Query: 321 HEMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVV 500
+E G ++ E D +L LR + + G ++ DIL A K S VF HV R N V
Sbjct: 1275 YEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVKRHCNKV 1334
Query: 501 VHNLAKLSCSFGVLHVWIEEFP 566
H LA++ + VW+EE+P
Sbjct: 1335 AHLLAQMCKNAMEKRVWLEEYP 1356
Score = 30.0 bits (66), Expect(3) = 2e-09
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF-FIMVGVG 199
W PP +VK+N DAA+F + +G+G
Sbjct: 1210 WSVPPVGMVKLNVDAAVFKHVGIGMG 1235
Score = 28.9 bits (63), Expect(3) = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+GGVVRD +G++L + C AE +LR + +A
Sbjct: 1233 GMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVA 1274
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 46.6 bits (109), Expect(3) = 2e-09
Identities = 30/79 (37%), Positives = 39/79 (49%)
Frame = +3
Query: 330 GITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVVHN 509
G +I E+D+L + L + L ++ DILS FS FSHV R GN V HN
Sbjct: 1266 GYGDVIFESDSLVATKRLTKAAIFFSDLDAILGDILSMCNAFSSVSFSHVKRDGNTVAHN 1325
Query: 510 LAKLSCSFGVLHVWIEEFP 566
LA++ FGV W P
Sbjct: 1326 LARV-VPFGVEQCWEHHCP 1343
Score = 31.6 bits (70), Expect(3) = 2e-09
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 92 MLDSSVAGPSIWCPPPANIVKINTDAAI 175
M S+ PS W PP +K+NTDA++
Sbjct: 1187 MRSSAALSPSRWYAPPVGAIKLNTDASL 1214
Score = 28.5 bits (62), Expect(3) = 2e-09
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 187 GWCGIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLAL 300
GW G+G + RD +G++ F+ R E AE A+
Sbjct: 1218 GWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAI 1255
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 47.0 bits (110), Expect(3) = 4e-09
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 1291 EEGLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 1350
Query: 504 HNLAK 518
H+LA+
Sbjct: 1351 HSLAR 1355
Score = 30.8 bits (68), Expect(3) = 4e-09
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W PPPA++ IN+DAAIF
Sbjct: 1224 WQPPPASVWMINSDAAIF 1241
Score = 28.1 bits (61), Expect(3) = 4e-09
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 1248 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 1289
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 47.0 bits (110), Expect(3) = 4e-09
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 1248 EEGLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 1307
Query: 504 HNLAK 518
H+LA+
Sbjct: 1308 HSLAR 1312
Score = 30.8 bits (68), Expect(3) = 4e-09
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W PPPA++ IN+DAAIF
Sbjct: 1181 WQPPPASVWMINSDAAIF 1198
Score = 28.1 bits (61), Expect(3) = 4e-09
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 1205 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 1246
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 50.4 bits (119), Expect(3) = 4e-08
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +3
Query: 330 GITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVVHN 509
G+ ++I E+D + L + L ++F+IL+ FS V+SHV R GN V H+
Sbjct: 1263 GLQRVILESDCQVVINRLSKNAIFLSDLDLVLFNILASCTYFSSVVWSHVKRDGNYVAHH 1322
Query: 510 LAKLSCSFGVLHVWIEEFP 566
LAKL FGV VW FP
Sbjct: 1323 LAKL-IPFGVEQVWENHFP 1340
Score = 26.9 bits (58), Expect(3) = 4e-08
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 116 PSIWCPPPANIVKINTDAAI 175
P W PPA+ +K+N DA++
Sbjct: 1192 PRQWIAPPADSIKLNVDASL 1211
Score = 25.0 bits (53), Expect(3) = 4e-08
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 184 NGWCGIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IAMRW 330
+GW G+ + R G +LF+ R E AE A+ ++ + R+
Sbjct: 1214 DGWVGLSVIARRSDGGVLFAAVRRVRAYWAPEIAEAKAVELAVKLGRRY 1262
>gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japonica Group]
Length = 1145
Score = 47.0 bits (110), Expect(3) = 7e-08
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 1054 EEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 1113
Query: 504 HNLAK 518
H+LA+
Sbjct: 1114 HSLAR 1118
Score = 28.1 bits (61), Expect(3) = 7e-08
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 1011 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 1052
Score = 26.6 bits (57), Expect(3) = 7e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W P PA + IN+DAAIF
Sbjct: 987 WQPLPAGVWMINSDAAIF 1004
>gb|AAU89136.1| F-box domain containing protein [Oryza sativa Japonica Group]
Length = 855
Score = 47.0 bits (110), Expect(3) = 7e-08
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 764 EEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 823
Query: 504 HNLAK 518
H+LA+
Sbjct: 824 HSLAR 828
Score = 28.1 bits (61), Expect(3) = 7e-08
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 721 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 762
Score = 26.6 bits (57), Expect(3) = 7e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W P PA + IN+DAAIF
Sbjct: 697 WQPLPAGVWMINSDAAIF 714
>gb|EEC75888.1| hypothetical protein OsI_12930 [Oryza sativa Indica Group]
Length = 834
Score = 47.0 bits (110), Expect(3) = 7e-08
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 743 EEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 802
Query: 504 HNLAK 518
H+LA+
Sbjct: 803 HSLAR 807
Score = 28.1 bits (61), Expect(3) = 7e-08
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 700 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 741
Score = 26.6 bits (57), Expect(3) = 7e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W P PA + IN+DAAIF
Sbjct: 676 WQPLPAGVWMINSDAAIF 693
>gb|AAP44645.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 404
Score = 47.0 bits (110), Expect(3) = 7e-08
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G+ I+ +D L + R ++ ++ +G+GC++ DI A F C F HV+R N+
Sbjct: 313 EEGLQHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAA 372
Query: 504 HNLAK 518
H+LA+
Sbjct: 373 HSLAR 377
Score = 28.1 bits (61), Expect(3) = 7e-08
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G ++RD G+ L + ++ + E AE LA+R ++ +A
Sbjct: 270 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLA 311
Score = 26.6 bits (57), Expect(3) = 7e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W P PA + IN+DAAIF
Sbjct: 246 WQPLPAGVWMINSDAAIF 263
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 38.5 bits (88), Expect(3) = 3e-07
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +3
Query: 330 GITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVVHN 509
G II E+D + L + L ++ +I S F ++SHV R N V H+
Sbjct: 1263 GFAAIIVESDCQVVVNRLSKQALYLADLDIILHNIFSSCINFPSVLWSHVKRDANSVAHH 1322
Query: 510 LAKLSCSFGVLHVWIEEFP 566
LAKL+ FG+ +W P
Sbjct: 1323 LAKLT-PFGIEQIWENHVP 1340
Score = 30.8 bits (68), Expect(3) = 3e-07
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 187 GWCGIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IAMRW 330
GW G+ + RD G +LF+ R E AE A+ ++ + R+
Sbjct: 1215 GWVGLSVIARDSHGTVLFAAVRKVRAQWSAEIAEAKAIEMALRLGRRY 1262
Score = 30.0 bits (66), Expect(3) = 3e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 FNGMKKEPRKGACRAITMVDEYNK--ANDCPRMLDSSVAGPSIWCPPPANIVKINTDAAI 175
FN P R +V+E+ A P ++ +W PP ++K+N DA++
Sbjct: 1152 FNQSSTPPHILLARVSRLVEEHGTYTARIYPNRNCCAIPSARVWAAPPPEVIKLNVDASL 1211
>gb|EEC72753.1| hypothetical protein OsI_06384 [Oryza sativa Indica Group]
Length = 556
Score = 35.8 bits (81), Expect(3) = 7e-06
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G +I D L + + L ++ + +GC++ DI +F F HV NV
Sbjct: 465 EEGFHNVIVACDCLSVIQKLNSPGRDRSKIGCLVEDIKKLGVEFISVSFIHVSHCSNVAA 524
Query: 504 HNLAKLSCSFGVLHVWIEEFP 566
H LA+ S V +V+ E P
Sbjct: 525 HTLARCS-EPSVCNVYHNETP 544
Score = 32.7 bits (73), Expect(3) = 7e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W PPPA + INTDAA+F
Sbjct: 398 WVPPPAGVFLINTDAAVF 415
Score = 26.2 bits (56), Expect(3) = 7e-06
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G V+RD+ G L + G E AE A+R ++ +A
Sbjct: 422 GVGVVIRDQHGNCLLAANTRFMGITDPETAEACAIRHALWLA 463
>gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japonica Group]
Length = 420
Score = 35.8 bits (81), Expect(3) = 7e-06
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +3
Query: 324 EMGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVV 503
E G +I D L + + L ++ + +GC++ DI +F F HV NV
Sbjct: 329 EEGFHNVIVACDCLSVIQKLNSPGRDRSKIGCLVEDIKKLGVEFISVSFIHVSHCSNVAA 388
Query: 504 HNLAKLSCSFGVLHVWIEEFP 566
H LA+ S V +V+ E P
Sbjct: 389 HTLARCS-EPSVCNVYHNETP 408
Score = 32.7 bits (73), Expect(3) = 7e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 125 WCPPPANIVKINTDAAIF 178
W PPPA + INTDAA+F
Sbjct: 262 WVPPPAGVFLINTDAAVF 279
Score = 26.2 bits (56), Expect(3) = 7e-06
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 196 GIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM*IA 321
G+G V+RD+ G L + G E AE A+R ++ +A
Sbjct: 286 GVGVVIRDQHGNCLLAANTRFMGITDPETAEACAIRHALWLA 327
>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 459
Score = 38.5 bits (88), Expect(2) = 8e-06
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 175 FFYNGWCGIGGVVRDEKGEILFSMCDLNRGSLKVEEAEVLALRTSM 312
F G G+G V+RDE G+ + ++C RG+ +AEVL++R ++
Sbjct: 322 FANEGRVGLGSVIRDESGKFVAALCCHIRGNYSPRDAEVLSIREAL 367
Score = 37.0 bits (84), Expect(2) = 8e-06
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +3
Query: 327 MGITKIIAETDNLRLERCLRPRYKENNGLGCMMFDILSPAKKFSYCVFSHVHRSGNVVVH 506
M ++K+I ETD L+ L R N G ++ D A FS V RS N H
Sbjct: 373 MKLSKVIVETDCLQAFNALVDRKCPLNSFGSLVLDCKCIADSIGDIAFSFVGRSANSASH 432
Query: 507 NLAKLSCSFGVLHVW 551
+AK S VW
Sbjct: 433 FVAKAGNSLPGRDVW 447