BLASTX nr result
ID: Achyranthes23_contig00041557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00041557
(431 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ39715.1| hypothetical protein OsJ_24153 [Oryza sativa Japo... 61 1e-11
gb|EOY23106.1| DNA-directed RNA polymerase II subunit protein is... 62 2e-11
ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, ... 61 3e-11
ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, I... 61 3e-11
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin... 61 3e-11
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun... 61 4e-11
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ... 61 4e-11
ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, ... 61 5e-11
ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citr... 61 5e-11
gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indi... 61 5e-11
ref|NP_001059582.1| Os07g0463100 [Oryza sativa Japonica Group] g... 61 5e-11
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I... 61 5e-11
ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group] g... 61 5e-11
ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, I... 60 5e-11
ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, I... 61 5e-11
ref|XP_004169254.1| PREDICTED: DNA-directed RNA polymerases I, I... 60 6e-11
ref|XP_004956146.1| PREDICTED: probable DNA-directed RNA polymer... 60 7e-11
gb|ACF83139.1| unknown [Zea mays] gi|414871592|tpg|DAA50149.1| T... 60 7e-11
ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, I... 60 9e-11
ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [A... 61 1e-10
>gb|EAZ39715.1| hypothetical protein OsJ_24153 [Oryza sativa Japonica Group]
Length = 177
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 92 RKTSKYMTKYERARILGTRALQISMNAPVMV 122
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 229 RYEDEPPEPEIEKG 188
RYEDEPPEPEIE+G
Sbjct: 47 RYEDEPPEPEIEEG 60
>gb|EOY23106.1| DNA-directed RNA polymerase II subunit protein isoform 1 [Theobroma
cacao]
Length = 143
Score = 62.4 bits (150), Expect(2) = 2e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -1
Query: 101 QLRKTSKYMTKYEHARILGTRALQISMNAPVMV 3
++RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 56 KIRKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 31.6 bits (70), Expect(2) = 2e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Oryza brachyantha]
Length = 143
Score = 61.2 bits (147), Expect(2) = 3e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Setaria italica]
Length = 143
Score = 61.2 bits (147), Expect(2) = 3e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
gi|255626491|gb|ACU13590.1| unknown [Glycine max]
Length = 142
Score = 61.2 bits (147), Expect(2) = 3e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMV 87
Score = 32.3 bits (72), Expect(2) = 3e-11
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRIYSR 164
YEDEPPEPEIE+G + + ++
Sbjct: 13 YEDEPPEPEIEEGAEEDVENK 33
>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
notabilis]
Length = 143
Score = 61.2 bits (147), Expect(2) = 4e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 32.0 bits (71), Expect(2) = 4e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEDV 30
>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Glycine max]
Length = 142
Score = 61.2 bits (147), Expect(2) = 4e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMV 87
Score = 32.0 bits (71), Expect(2) = 4e-11
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRIYSR 164
YEDEPPEPEIE+G + + ++
Sbjct: 13 YEDEPPEPEIEEGAEEDLENK 33
>ref|XP_006657672.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
6A-like [Oryza brachyantha]
Length = 143
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citrus clementina]
gi|568874475|ref|XP_006490341.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 6A-like [Citrus
sinensis] gi|557523738|gb|ESR35105.1| hypothetical
protein CICLE_v10006171mg [Citrus clementina]
Length = 143
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indica Group]
Length = 143
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKYMTKYERARILGTRALQISMNAPVMV 88
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|NP_001059582.1| Os07g0463100 [Oryza sativa Japonica Group]
gi|22093730|dbj|BAC07023.1| putative DNA-directed RNA
polymerase Iia [Oryza sativa Japonica Group]
gi|113611118|dbj|BAF21496.1| Os07g0463100 [Oryza sativa
Japonica Group] gi|125558240|gb|EAZ03776.1| hypothetical
protein OsI_25904 [Oryza sativa Indica Group]
gi|215768441|dbj|BAH00670.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 142
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMV 87
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 isoform 1 [Vitis vinifera]
gi|297741100|emb|CBI31831.3| unnamed protein product
[Vitis vinifera]
Length = 142
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMV 87
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|NP_001050570.1| Os03g0586600 [Oryza sativa Japonica Group]
gi|50399946|gb|AAT76334.1| putative DNA-directed RNA
polymerase II subunit [Oryza sativa Japonica Group]
gi|108709558|gb|ABF97353.1| DNA-directed RNA polymerases
I, II, and III 14.4 kDa polypeptide, putative, expressed
[Oryza sativa Japonica Group]
gi|113549041|dbj|BAF12484.1| Os03g0586600 [Oryza sativa
Japonica Group] gi|125586969|gb|EAZ27633.1| hypothetical
protein OsJ_11577 [Oryza sativa Japonica Group]
gi|215678566|dbj|BAG92221.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 142
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMV 87
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cucumis sativus]
Length = 142
Score = 60.5 bits (145), Expect(2) = 5e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = -1
Query: 101 QLRKTSKYMTKYEHARILGTRALQISMNAPVMV 3
++RKTSK+MTKYE ARILGTRALQISMNAPVMV
Sbjct: 55 RVRKTSKFMTKYERARILGTRALQISMNAPVMV 87
Score = 32.3 bits (72), Expect(2) = 5e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|XP_002282723.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2 [Vitis vinifera] gi|302143496|emb|CBI22057.3|
unnamed protein product [Vitis vinifera]
Length = 141
Score = 61.2 bits (147), Expect(2) = 5e-11
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 56 RKTSKYMTKYERARILGTRALQISMNAPVMV 86
Score = 31.6 bits (70), Expect(2) = 5e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 226 YEDEPPEPEIEKG 188
YEDEPPEPEIE+G
Sbjct: 13 YEDEPPEPEIEEG 25
>ref|XP_004169254.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like, partial [Cucumis sativus]
Length = 97
Score = 60.5 bits (145), Expect(2) = 6e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = -1
Query: 101 QLRKTSKYMTKYEHARILGTRALQISMNAPVMV 3
++RKTSK+MTKYE ARILGTRALQISMNAPVMV
Sbjct: 55 RVRKTSKFMTKYERARILGTRALQISMNAPVMV 87
Score = 32.3 bits (72), Expect(2) = 6e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|XP_004956146.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
subunit RPABC2-like [Setaria italica]
Length = 143
Score = 60.1 bits (144), Expect(2) = 7e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKT+KYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTTKYMTKYERARILGTRALQISMNAPVMV 88
Score = 32.3 bits (72), Expect(2) = 7e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>gb|ACF83139.1| unknown [Zea mays] gi|414871592|tpg|DAA50149.1| TPA: DNA-directed
RNA polymerase I, II, and III polypeptide isoform 1 [Zea
mays] gi|414871593|tpg|DAA50150.1| TPA: DNA-directed RNA
polymerase I, II, and III polypeptide isoform 2 [Zea
mays]
Length = 142
Score = 60.1 bits (144), Expect(2) = 7e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKT+KYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 57 RKTTKYMTKYERARILGTRALQISMNAPVMV 87
Score = 32.3 bits (72), Expect(2) = 7e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|XP_004140788.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC2-like [Cucumis sativus]
gi|449485538|ref|XP_004157202.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC2-like
[Cucumis sativus]
Length = 143
Score = 59.7 bits (143), Expect(2) = 9e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSK+MTKYE ARILGTRALQISMNAPVMV
Sbjct: 58 RKTSKFMTKYERARILGTRALQISMNAPVMV 88
Score = 32.3 bits (72), Expect(2) = 9e-11
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YEDEPPEPEIE+G + +
Sbjct: 13 YEDEPPEPEIEEGAEEEL 30
>ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [Amborella trichopoda]
gi|548861988|gb|ERN19353.1| hypothetical protein
AMTR_s00069p00112860 [Amborella trichopoda]
Length = 144
Score = 61.2 bits (147), Expect(2) = 1e-10
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 95 RKTSKYMTKYEHARILGTRALQISMNAPVMV 3
RKTSKYMTKYE ARILGTRALQISMNAPVMV
Sbjct: 59 RKTSKYMTKYERARILGTRALQISMNAPVMV 89
Score = 30.4 bits (67), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 226 YEDEPPEPEIEKGRRKRI 173
YE+EPPEPE+E+G + +
Sbjct: 13 YEEEPPEPELEEGAEEEV 30