BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00040848
         (774 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  96   2e-17
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  94   4e-17
ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutr...    91   3e-16
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    86   2e-14
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    86   2e-14
gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]         85   3e-14
gb|EOY10285.1| Uncharacterized protein TCM_025656 [Theobroma cacao]    84   4e-14
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    84   7e-14
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...    82   2e-13
gb|EOY04261.1| Uncharacterized protein TCM_019516, partial [Theo...    81   3e-13
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              81   4e-13
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              81   4e-13
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]    81   4e-13
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...    80   8e-13
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...    80   8e-13
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-...    80   1e-12
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]    80   1e-12
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas...    80   1e-12
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-...    80   1e-12
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...    80   1e-12

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVV-PMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           KQ  + FS G  Y+DEV+CDVV PMDACH+LLGRPW++DR+T H+GKDN Y F    K +
Sbjct: 458 KQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDNVYIFKHQGKKV 517

Query: 182 TLTPQNQNQETQTSPTYKNQSSPI 253
           TLTP   NQ    SP    + S +
Sbjct: 518 TLTPLPPNQRDYGSPNVPEEMSGV 541


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 42/83 (50%), Positives = 53/83 (63%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  V FS G  Y DE +CDV+PMDACH+LLGRPW+FDRD+ H G+DNTY F F  + + 
Sbjct: 447 KQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYTFKFRSRKVI 506

Query: 185 LTPQNQNQETQTSPTYKNQSSPI 253
           LTP     +  T P+    S  +
Sbjct: 507 LTPLPPVLKHTTPPSMLEPSKEV 529


>ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutrema salsugineum]
           gi|557089351|gb|ESQ30059.1| hypothetical protein
           EUTSA_v10012229mg [Eutrema salsugineum]
          Length = 382

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 41/80 (51%), Positives = 52/80 (65%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           T +A V FS G  Y+D + CD+ PMD  H++LGRPWQFDRDTCH GK NTY F+F ++ I
Sbjct: 270 THRALVSFSIGAFYKDTIYCDIAPMDVSHLILGRPWQFDRDTCHNGKKNTYSFVFENRKI 329

Query: 182 TLTPQNQNQETQTSPTYKNQ 241
            L P   N E  + P   N+
Sbjct: 330 VLLP---NPEPASLPLATNK 346


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  + F+ G +YEDE++CDVVPM ACH+LLGRPWQ+DRDT H G+ N Y  +   K  T
Sbjct: 481 KQCMISFNVG-RYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYT 539

Query: 185 LTPQNQNQ 208
           L P + +Q
Sbjct: 540 LAPLSPSQ 547


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  + F+ G +YEDE++CDVVPM ACH+LLGRPWQ+DRDT H G+ N Y  +   K  T
Sbjct: 481 KQCMISFNVG-RYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYT 539

Query: 185 LTPQNQNQ 208
           L P + +Q
Sbjct: 540 LAPLSPSQ 547


>gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]
          Length = 794

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 40/64 (62%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK+  V FS G +YEDEV CDV+PMDACH+LLGRPWQ+DR   H G  NTY FI     I
Sbjct: 436 TKRCCVQFSIGNKYEDEVWCDVIPMDACHLLLGRPWQYDRRAHHDGYKNTYSFIKDGAKI 495

Query: 182 TLTP 193
            LTP
Sbjct: 496 MLTP 499


>gb|EOY10285.1| Uncharacterized protein TCM_025656 [Theobroma cacao]
          Length = 505

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 39/64 (60%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK+  V FS G +YEDEV CD++PMDACH+LLGRPWQ+DR   H G  NTY FI     I
Sbjct: 285 TKRCCVQFSIGNKYEDEVWCDIIPMDACHLLLGRPWQYDRRAHHDGYKNTYSFIKDGAKI 344

Query: 182 TLTP 193
            LTP
Sbjct: 345 MLTP 348


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 49/106 (46%), Positives = 62/106 (58%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           K+  V FS G +Y+DEV+CD+VPM A HILLGRPWQFDR   H G  N Y FI  +KTIT
Sbjct: 474 KEVLVSFSIG-RYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFIKNNKTIT 532

Query: 185 LTPQNQNQETQTSPTYKNQSSPIAHKKTLFLKPKR*CDDIGSFYHK 322
           L P    Q+ +      +++   + KK    K +R     GSFY K
Sbjct: 533 LVPLTPRQKKE------SENXKESEKKIESGKNERKTKKQGSFYAK 572


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 38/63 (60%), Positives = 45/63 (71%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQA +  S G +Y+D+V+CDV+PM ACHILLGRPWQ+DRDT H GK N Y      K  T
Sbjct: 463 KQALISISIG-KYQDDVLCDVIPMHACHILLGRPWQYDRDTLHHGKTNKYTIHKGGKKYT 521

Query: 185 LTP 193
           LTP
Sbjct: 522 LTP 524


>gb|EOY04261.1| Uncharacterized protein TCM_019516, partial [Theobroma cacao]
          Length = 215

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 39/64 (60%), Positives = 43/64 (67%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK   V FS G +YEDEV CDV+PMDAC +LLGRPWQ+DR   H G  NTY FI     I
Sbjct: 112 TKHCCVQFSIGNKYEDEVWCDVIPMDACQLLLGRPWQYDRRAHHDGYKNTYSFIKDGAKI 171

Query: 182 TLTP 193
            LTP
Sbjct: 172 MLTP 175


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  +CF  G +YED V+CDVVPM+A H+LLGRPWQFDR   H G  N Y F++  + I 
Sbjct: 424 KQVEICFKIG-KYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKIN 482

Query: 185 LTPQNQNQ 208
           L P N ++
Sbjct: 483 LVPLNPSE 490


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  +CF  G +YED V+CDVVPM+A H+LLGRPWQFDR   H G  N Y F++  + I 
Sbjct: 424 KQVEICFKIG-KYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKIN 482

Query: 185 LTPQNQNQ 208
           L P N ++
Sbjct: 483 LVPLNPSE 490


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 41/69 (59%), Positives = 46/69 (66%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  V FS G +Y+DEV+CD+VPM A HILLGRPWQFDR   H G  N Y F   +KTIT
Sbjct: 452 KQVLVSFSIG-RYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFXKDNKTIT 510

Query: 185 LTPQNQNQE 211
           L P    QE
Sbjct: 511 LVPLTPRQE 519


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2    TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
            TK   + F+ G  Y D V CDVVPM AC+ILLGRPWQFDRD+ H G+ N Y F++  K I
Sbjct: 895  TKLVHINFAIG-NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKI 953

Query: 182  TLTPQNQNQETQTSPTYKNQSSPIAHKK---------TLFLKPK 286
             L P +     +       +S   + KK         T+ LKPK
Sbjct: 954  VLHPMSSEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPK 997


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2    TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
            TK   + F+ G  Y D V CDVVPM AC+ILLGRPWQFDRD+ H G+ N Y F++  K I
Sbjct: 904  TKLVHINFAIG-NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKI 962

Query: 182  TLTPQNQNQETQTSPTYKNQSSPIAHKK---------TLFLKPK 286
             L P +     +       +S   + KK         T+ LKPK
Sbjct: 963  VLHPMSSEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPK 1006


>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550404|gb|ABA93201.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1297

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK   + F+ G  Y D V CDVVPM AC+ILLGRPWQFDRD+ H G+ N Y F++  K I
Sbjct: 478 TKLVHINFAIG-NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKI 536

Query: 182 TLTPQNQNQETQTSPTYKNQSSPIAHKK---------TLFLKPK 286
            L P +     +       +S   + KK         T+ LKPK
Sbjct: 537 VLHPMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPK 580


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
 Frame = +2

Query: 14   RVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTITLTP 193
            ++  S G  Y+DE+VCDV+ MDAC+ILLGR W +D D  ++G+DNT+ F +  K I L P
Sbjct: 809  KIPLSIGKYYKDEIVCDVLDMDACYILLGRSWHYDVDVTYKGQDNTFVFWWFDKKIVLMP 868

Query: 194  QNQNQETQT-----SPTYKNQSSPIAHKKTLFLK 280
            Q+Q+ E  +      P + N +S    K+ L L+
Sbjct: 869  QSQSSENNSVTKKDKPLFTNIASLDFFKQDLVLQ 902


>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 386

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = +2

Query: 5   KQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTIT 184
           KQ  V FS G +Y DE++CDVVPM+A HILLGRPWQFDR+  H GK NT+ F+     I+
Sbjct: 15  KQVLVNFSIG-KYNDEILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTFTFVHKKHKIS 73

Query: 185 LTPQNQNQETQTSPTYK 235
           L P +  +  Q   T K
Sbjct: 74  LLPLSPKEICQDELTLK 90


>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group]
          Length = 1238

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK   + F+ G  Y D V CDVVPM AC+ILLGRPWQFDRD+ H G+ N Y F++  K I
Sbjct: 456 TKLVHINFAIG-NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKI 514

Query: 182 TLTPQNQNQETQTSPTYKNQSSPIAHKK---------TLFLKPK 286
            L P +     +       +S   + KK         T+ LKPK
Sbjct: 515 VLHPMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPK 558


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
 Frame = +2

Query: 2   TKQARVCFSFGPQYEDEVVCDVVPMDACHILLGRPWQFDRDTCHRGKDNTYQFIFCHKTI 181
           TK   + F+ G  Y D V CDVVPM AC+ILLGRPWQFDRD+ H G+ N Y F++  K I
Sbjct: 516 TKLVHINFAIG-NYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKI 574

Query: 182 TLTPQNQNQETQTSPTYKNQSSPIAHKK---------TLFLKPK 286
            L P +     +       +S   + KK         T+ LKPK
Sbjct: 575 VLHPMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPK 618