BLASTX nr result

ID: Achyranthes23_contig00039884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00039884
         (527 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    87   3e-25
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      92   2e-24
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         100   2e-19
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    98   1e-18
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      98   1e-18
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...    96   4e-18
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]      96   4e-18
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    94   2e-17
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    93   3e-17
ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Popu...    91   2e-16
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    88   1e-15
gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo...    56   1e-15
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    66   3e-13
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    53   9e-13
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    62   3e-11
emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera]    64   3e-11
emb|CBI31012.3| unnamed protein product [Vitis vinifera]               54   4e-11
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]    59   1e-10
emb|CAN75475.1| hypothetical protein VITISV_006889 [Vitis vinifera]    64   1e-10
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...    49   5e-10

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 87.4 bits (215), Expect(2) = 3e-25
 Identities = 40/81 (49%), Positives = 61/81 (75%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +Q L ++R +A+GE+DLRVGN  +VAAL+     L LPSG ++EL+NCY+VP++S+NIIS
Sbjct: 404 MQSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIIS 463

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F+I+++ CS +
Sbjct: 464 ASCLMTEGYKFIIEDHGCSIF 484



 Score = 53.5 bits (127), Expect(2) = 3e-25
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = -1

Query: 527 LHLMLKVAVASIKTFEPKQEVLMVRXXXXXXXXXXXXXXXXXXXXXXKNKKAQVEPKKGP 348
           LH++LK A  SIK       ++                         +  K +++ K GP
Sbjct: 277 LHMLLKTAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLDGIQTNKPKLKTKSGP 336

Query: 347 QPDTKCFHCNGLGHWKRNCLKYKEDLK--NGKVVSNSG 240
             + +CF+C   GHWKRNC KY  DLK   G   S SG
Sbjct: 337 TQENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSG 374


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 92.4 bits (228), Expect(2) = 2e-24
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG++RSR L +GE++LRVGNG  VA + VG   L LPSGLVLEL+NCY VP+L +N+IS
Sbjct: 316 LQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVIS 375

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   NN CS Y
Sbjct: 376 ASCLQAEGYDFRSMNNGCSIY 396



 Score = 45.8 bits (107), Expect(2) = 2e-24
 Identities = 20/32 (62%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 359 KKGPQP-DTKCFHCNGLGHWKRNCLKYKEDLK 267
           KKG    D  CF+C   GHWKRNC KY EDLK
Sbjct: 245 KKGSAASDAVCFYCKETGHWKRNCKKYMEDLK 276


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
 Frame = -2

Query: 358 RRVRNRTQSVSTAMALAIGRGTASSTKRILRMGK*FPI----QGLQRSRPLAKGEIDLRV 191
           ++ +N   S S    + I   T+S+   +   G    I    QGL+RSR LA+GE+D+RV
Sbjct: 234 QKQQNGKSSTSGINVIEINLATSSTDSWVFDTGLVAHICKSLQGLKRSRSLARGEVDIRV 293

Query: 190 GNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIISVARLAKLGYTFVIKNNCCS 11
           GNG RVA + VG  +LSLPSGLVLEL+NCY +P+L KN+IS + L   GY F   +N CS
Sbjct: 294 GNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCKNVISASCLQAEGYGFRSVDNGCS 353

Query: 10  FY 5
            Y
Sbjct: 354 VY 355


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QGL+RSR LA+G +D+RVGNG RVA + VG   LSLPSGLVLEL+NCY +P+L KN+IS
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVIS 467

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   +N CS Y
Sbjct: 468 ASCLQAEGYGFRSMDNGCSVY 488


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QGL+RSR LA+G +D+RVGNG RVA + VG   LSLPSGLVLEL+NCY +P+L KN+IS
Sbjct: 408 LQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVIS 467

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   +N CS Y
Sbjct: 468 ASCLQAEGYGFRSMDNGCSVY 488


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QGL+RSR LA+GE+D+RVGNG RVAA+ VG   LSLPSG+VLEL+NCY + +L KN+IS
Sbjct: 368 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVIS 427

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   +N CS Y
Sbjct: 428 ASCLQAEGYGFRSVDNGCSVY 448


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QGL+RSR LA+GE+D+RVGNG RVAA+ VG   LSLPSG+VLEL+NCY + +L KN+IS
Sbjct: 295 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVIS 354

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   +N CS Y
Sbjct: 355 ASCLQAEGYGFRSVDNGCSVY 375


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           + G+  S  + +G++DLR+ NG RV+ L VG Y+LS PSG+VLEL NCY+V +++KNIIS
Sbjct: 73  MHGINNSITMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIIS 132

Query: 67  VARLAKLGYTFVIKNNCCSF 8
           V+ L   G+ F+IKN CCSF
Sbjct: 133 VSCLDMEGFHFLIKNKCCSF 152


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QGL+RSR LA+GE+D+RVGNG RVAA+ VG   LSLPS LVLEL+N Y +P+L KN+IS
Sbjct: 292 LQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCKNVIS 351

Query: 67  VARLAKLGYTFVIKNNCCSFY 5
            + L   GY F   +N CS Y
Sbjct: 352 ASCLQAEGYGFRSVDNDCSVY 372


>ref|XP_006369910.1| hypothetical protein POPTR_0001s34915g [Populus trichocarpa]
           gi|550348894|gb|ERP66479.1| hypothetical protein
           POPTR_0001s34915g [Populus trichocarpa]
          Length = 120

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = -2

Query: 238 LQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIISVAR 59
           L +SR L KGE+DL VGNGT+   L V  Y L+   G++LELDNCYFV  LS+NI+SV+ 
Sbjct: 6   LTKSRRLCKGEVDLYVGNGTKAVTLTVETYYLTFQIGIILELDNCYFVSILSRNIVSVSF 65

Query: 58  LAKLGYTFVIKNNCCSFY 5
           LA  G  F++   CCSFY
Sbjct: 66  LALNGLKFIMNGKCCSFY 83


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = -2

Query: 244 QGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIISV 65
           +GL+RSR LA+GE+D+ VGNG  V A+ VG   LSLPSGLVLEL+NCY + +L KN+IS 
Sbjct: 202 KGLKRSRNLARGEVDIHVGNGASVVAVAVGTMPLSLPSGLVLELNNCYCILALCKNVISA 261

Query: 64  ARLAKLGYTFVIKNNCCSFY 5
           + L   GY F   +N CS Y
Sbjct: 262 SCLQAEGYGFRSVDNGCSVY 281


>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 443

 Score = 56.2 bits (134), Expect(2) = 1e-15
 Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = -1

Query: 380 KKAQVEPKKGP--QPDTKCFHCNGLGHWKRNCLKYKEDLKNGK 258
           K  + +  KGP  +P  KCFHCNG GHWKRNC KY E+LK  K
Sbjct: 141 KNRKPKKTKGPIQKPKGKCFHCNGEGHWKRNCHKYLEELKKKK 183



 Score = 52.0 bits (123), Expect(2) = 1e-15
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -2

Query: 253 FPIQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNI 74
           F +Q L     LA G+  ++VGNG RV A  VG   L       L L+N YF+P + +N+
Sbjct: 217 FSLQSLSSYTELADGDYMIKVGNGARVTAKAVGEVRLHFRENKFLVLNNVYFIPDIRRNL 276

Query: 73  ISVARL 56
           IS+++L
Sbjct: 277 ISMSKL 282


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 65.9 bits (159), Expect(2) = 3e-13
 Identities = 31/70 (44%), Positives = 49/70 (70%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG Q +R L+KGE+++ +G+GT VA L VG   L+  +  +L L N  +VPS+ +N+IS
Sbjct: 275 LQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNVLYVPSIRRNLIS 334

Query: 67  VARLAKLGYT 38
           V+ L+K GY+
Sbjct: 335 VSSLSKNGYS 344



 Score = 34.3 bits (77), Expect(2) = 3e-13
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 347 QPDTKCFHCNGLGHWKRNCLKYKEDLKNG 261
           +P  KCFHC   GHWK  C  +    K G
Sbjct: 212 KPKGKCFHCKQPGHWKLQCPTWLAKKKQG 240


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 53.1 bits (126), Expect(2) = 9e-13
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -2

Query: 238 LQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIISVAR 59
           L+ S+ L +G   +RVG+G RV+A  VG   LS  +   L L N YF+P   +N+ISV++
Sbjct: 237 LESSKDLEEGAFMMRVGSGARVSATTVGTVXLSFANNKYLLLHNVYFIPDFKRNLISVSK 296

Query: 58  L 56
           L
Sbjct: 297 L 297



 Score = 45.4 bits (106), Expect(2) = 9e-13
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -1

Query: 380 KKAQVEPKKGPQ--PDTKCFHCNGLGHWKRNCLKYKEDLKNGK 258
           KK Q + +K  +  P  KCF+CN   HWKRNC KY ++LK  K
Sbjct: 156 KKIQKKKRKVVELKPKEKCFYCNQDDHWKRNCKKYLDELKQKK 198


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 61.6 bits (148), Expect(2) = 3e-11
 Identities = 29/70 (41%), Positives = 47/70 (67%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG Q +R L+KGE+++ +GNG+ VA L VG   L+  +   L L N  +VPS+ +N+I 
Sbjct: 627 LQGFQETRQLSKGEVNIFLGNGSEVAVLAVGNIALNFKNNRTLFLKNVLYVPSIRRNLIP 686

Query: 67  VARLAKLGYT 38
           ++ L+K GY+
Sbjct: 687 ISSLSKNGYS 696



 Score = 32.0 bits (71), Expect(2) = 3e-11
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 347 QPDTKCFHCNGLGHWKRNCLKYKEDLKNG 261
           +P  KCFHC    HWK  C  +    K G
Sbjct: 564 KPKGKCFHCKQPSHWKLQCPTWLAKKKQG 592


>emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera]
          Length = 1051

 Score = 63.5 bits (153), Expect(2) = 3e-11
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG  RSR    GE  + VGNG +VA   +GI+ L + S   L+L+  + VPS  +N+IS
Sbjct: 216 MQGCLRSRMPTDGERYIYVGNGNKVAVKAIGIFKLQIDSRYTLDLEETFEVPSFRRNLIS 275

Query: 67  VARLAKLGYTFVIKNNCC 14
           V+ L K GY +  +N  C
Sbjct: 276 VSCLDKFGYCYSFRNRMC 293



 Score = 30.0 bits (66), Expect(2) = 3e-11
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 383 NKKAQVEPKKGPQPDTKCFHCNGLGHWKRNCLKY 282
           +K ++ + +K    +  CF C   GH K+ C KY
Sbjct: 164 SKTSKQKVQKKQDKEITCFFCKKAGHMKKTCTKY 197


>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score = 53.9 bits (128), Expect(2) = 4e-11
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGN--GTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNI 74
           +QG+Q  R     E  +  GN  G+ V A  +G   L+L SG VLEL   ++VPS S+N+
Sbjct: 341 LQGMQNLRKPVTSEQFILSGNKMGSHVEA--IGTCYLTLNSGFVLELQKTFYVPSFSRNL 398

Query: 73  ISVARLAKLGYTF 35
           ISV+RL   GY+F
Sbjct: 399 ISVSRLVPFGYSF 411



 Score = 39.3 bits (90), Expect(2) = 4e-11
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 377 KAQVEPKKGPQPDTKCFHCNGLGHWKRNCLKYKEDLK 267
           K Q+ PK   + D KCF C   GH K+ CLK++  L+
Sbjct: 268 KQQISPKSDIKKDEKCFFCKKKGHVKKKCLKFQNWLE 304


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score = 58.5 bits (140), Expect(2) = 1e-10
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG+Q  R     E  +  GN  R     VG  NL L SG +L L+  ++VPS S+N+IS
Sbjct: 295 LQGMQNLRKPMPSEQCIYSGNKMRSHVEAVGTCNLVLSSGFILNLEKTFYVPSFSRNLIS 354

Query: 67  VARLAKLGYTFVIKNNCCS-FYK 2
           V+R+  LGY+F       S FYK
Sbjct: 355 VSRIVPLGYSFSFYETSFSLFYK 377



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 377 KAQVEPKKGPQPDTKCFHCNGLGHWKRNCLKYKEDL-KNGKVVS 249
           K ++ P+ G +   KCF     GH K+ C K+++ L K GK +S
Sbjct: 222 KGKIPPQGGIKKVNKCFFYKKKGHMKKGCTKFQKWLEKKGKPIS 265


>emb|CAN75475.1| hypothetical protein VITISV_006889 [Vitis vinifera]
          Length = 1028

 Score = 63.5 bits (153), Expect(2) = 1e-10
 Identities = 34/80 (42%), Positives = 46/80 (57%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELDNCYFVPSLSKNIIS 68
           +QG  RSR    GE  + VGNG + A   +G++ L L SG  L+L+  + VPS  +N+IS
Sbjct: 246 MQGCLRSRMPTDGERYIYVGNGNKAAVNAIGLFRLQLDSGCTLDLEETFVVPSFKRNLIS 305

Query: 67  VARLAKLGYTFVIKNNCCSF 8
           V+ L K GY       CCSF
Sbjct: 306 VSCLDKFGY-------CCSF 318



 Score = 27.7 bits (60), Expect(2) = 1e-10
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 332 CFHCNGLGHWKRNCLKY 282
           CF C   GH K+ C KY
Sbjct: 211 CFFCKKAGHMKKTCTKY 227


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score = 49.3 bits (116), Expect(2) = 5e-10
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
 Frame = -2

Query: 247 IQGLQRSRPLAKGEIDLRVGNGTRVAALNVGIYNLSLPSGLVLELD------NCYFVPSL 86
           +QGL+RSR LA+GE+D+RVGNG RVAA+    Y  S   G  L L+       C  VP L
Sbjct: 325 LQGLKRSRSLARGEVDIRVGNGARVAAVATIKYLRSDRGGEYLSLEFGNHLKECGIVPQL 384

Query: 85  S 83
           +
Sbjct: 385 T 385



 Score = 40.0 bits (92), Expect(2) = 5e-10
 Identities = 26/78 (33%), Positives = 32/78 (41%)
 Frame = -1

Query: 527 LHLMLKVAVASIKTFEPKQEVLMVRXXXXXXXXXXXXXXXXXXXXXXKNKKAQVEPKKGP 348
           LH MLK A  SIK       ++M +                       N K +V+ K GP
Sbjct: 242 LHGMLKTAKESIKK-NSNHVMVMHKSKPNNKKSGQKRKLNSDEITSTSNSKTKVQ-KTGP 299

Query: 347 QPDTKCFHCNGLGHWKRN 294
             D +CF C   GHWKRN
Sbjct: 300 AKDAECFFCKETGHWKRN 317


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