BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00039196
         (645 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGS12473.1| AC1 protein [Hedyotis uncinella yellow mosaic virus]    75   5e-24
gb|ABS12047.1| AC1 [Ageratum yellow vein Taiwan virus]                 75   2e-23
gb|ACG49273.1| AC1 [Tomato leaf curl Kerala virus]                     72   4e-23
emb|CAD97701.1| replication-related protein [Tobacco leaf curl Y...    73   7e-23
gb|ABG26097.1| rep protein [Sida leaf curl virus]                      72   2e-22
gb|AGV74354.1| replication protein [Tomato leaf curl Hainan virus]     70   1e-21
emb|CBA18491.1| replication-associated protein [Ageratum enation...    70   4e-20
gb|AGI62915.1| C1 protein [Tomato leaf curl virus-[Australia:Aur...    75   1e-11
gb|AHH24774.1| AC1 [Ageratum yellow vein China virus]                  75   2e-11
emb|CAH18985.1| rep protein [Tobacco leaf curl Yunnan virus]           74   4e-11
emb|CAD54833.1| Rep protein [Tobacco leaf curl Yunnan virus - [Y...    74   5e-11
emb|CAQ58591.1| Rep [Tomato leaf curl Pakistan virus]                  71   5e-11
emb|CAI64614.1| replication-associated protein [Sri Lankan cassa...    73   5e-11
emb|CAI96156.1| AC1 protein [Tobacco leaf curl Yunnan virus-[Y283]]    73   8e-11
ref|YP_004123721.1| replicase [Okra enation leaf curl virus [Ind...    72   9e-11
gb|AFA26469.2| replication-associated protein [Pedilanthus leaf ...    70   1e-10
gb|AFA26437.2| replication-associated protein [Pedilanthus leaf ...    70   1e-10
emb|CCP46971.1| replication associated protein [Mesta yellow vei...    71   1e-10
gb|AGG37200.1| Rep [Okra enation leaf curl virus]                      71   1e-10
gb|AFQ55288.1| replication associated protein [Mesta yellow vein...    71   1e-10

>gb|AGS12473.1| AC1 protein [Hedyotis uncinella yellow mosaic virus]
          Length = 362

 Score = 75.1 bits (183), Expect(3) = 5e-24
 Identities = 67/195 (34%), Positives = 87/195 (44%), Gaps = 47/195 (24%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V+VQ E KY CT NNR FD+V  S S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLVQFEGKYRCT-NNRFFDLVSPSRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------K 327
               S + +  D L     +      + GG  S N+                       K
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDARSAR-GGQQSANDAYAKALNTGSKSEALNVIRELAPK 156

Query: 326 DYVCQFHNLNSN---IYSTNKNICFTLFYHHHL----------IMSHLTGFG-------- 210
           D+V QFHNLNSN   I++    +  + F               +  ++ G          
Sbjct: 157 DFVLQFHNLNSNLDRIFTPPAEVYVSPFSSSSFDQVPEELECWVSENVMGAAARPWRPNS 216

Query: 209 --LGGCSRTGKTLWA 171
             + G SRTGKT+WA
Sbjct: 217 IVIEGDSRTGKTMWA 231



 Score = 58.9 bits (141), Expect(3) = 5e-24
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+N+AWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKVYSNEAWYNVI 260



 Score = 23.5 bits (49), Expect(3) = 5e-24
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 642 FQNLSLPVNKK 610
           FQNL +P+NKK
Sbjct: 32  FQNLDIPINKK 42



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 62/193 (32%), Positives = 76/193 (39%), Gaps = 61/193 (31%)
 Frame = -3

Query: 439 ESGDTVEWGEFQICLD---------DDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT+EWGEFQI            +DAYA ALN+GSK E AL +I+ +     +     
Sbjct: 106 KDGDTLEWGEFQIDARSARGGQQSANDAYAKALNTGSKSE-ALNVIRELAPKDFVLQFHN 164

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV----------------VAAEQVK 182
                 +IFTPP + YVSP+        P  L   WV                +  E   
Sbjct: 165 LNSNLDRIFTPPAEVYVSPFSSSSFDQVPEELEC-WVSENVMGAAARPWRPNSIVIEGDS 223

Query: 181 HCGPT*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRH 83
             G T   +W+    P N     L                  V  HYL         QR 
Sbjct: 224 RTGKT---MWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD 280

Query: 82  WQSNTLYGKPIQI 44
           WQSNT YGKPIQI
Sbjct: 281 WQSNTKYGKPIQI 293


>gb|ABS12047.1| AC1 [Ageratum yellow vein Taiwan virus]
          Length = 360

 Score = 75.1 bits (183), Expect(2) = 2e-23
 Identities = 66/196 (33%), Positives = 85/196 (43%), Gaps = 48/196 (24%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KY C  NNR FD+V  S S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYQC-KNNRFFDLVSPSRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAQALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSN---IYSTNKNICFTLFYH----------HHLIMSHLTGFG------- 210
           KDYV QFHNLN+N   I++    +    F               +  +++G         
Sbjct: 156 KDYVLQFHNLNANLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPI 215

Query: 209 ---LGGCSRTGKTLWA 171
              +GG SRTGKT+WA
Sbjct: 216 SIVIGGDSRTGKTMWA 231



 Score = 60.5 bits (145), Expect(2) = 2e-23
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+NDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKVYSNDAWYNVI 260



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 60/190 (31%), Positives = 77/190 (40%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT+EWGEFQI            +DAYA ALNSGSK E AL +IK +     +     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSE-ALNVIKELAPKDYVLQFHN 164

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IF PP++ +V P+        P  L   WV   V+    +   P  +++    
Sbjct: 165 LNANLDRIFAPPLEVFVCPFLSSSFDQVPEELE-EWVSENVSGAAARPWRPISIVIGGDS 223

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 224 RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 283

Query: 73  NTLYGKPIQI 44
           NT YGKPIQI
Sbjct: 284 NTKYGKPIQI 293


>gb|ACG49273.1| AC1 [Tomato leaf curl Kerala virus]
          Length = 360

 Score = 72.0 bits (175), Expect(2) = 4e-23
 Identities = 65/194 (33%), Positives = 86/194 (44%), Gaps = 46/194 (23%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q E KY C  NNR FD+V  + S  FHPN +  K  
Sbjct: 40  KKYIKICRELHENGEPHL--HVLIQFEGKYKC-QNNRFFDLVSPTRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*G------------GGGSPNN----------KD 324
               S + +  D L     +      + G              GS +           KD
Sbjct: 97  SDVKSYLEKDGDTLDWGEFQIDGRSARGGHQSAYDAYAAALNAGSKSEALRVIKELAPKD 156

Query: 323 YVCQFHNLNSN---IYSTNKNICFTLFYHHHL--IMSHLTGFG----------------- 210
           YV QFHNLN+N   I++    +  + F    L  +   L  +                  
Sbjct: 157 YVLQFHNLNANLDRIFTPPMEVYVSPFLSSSLNQVPEELEEWAADNVVSAAARPLRPVSI 216

Query: 209 -LGGCSRTGKTLWA 171
            + G SRTGKT+WA
Sbjct: 217 VIEGDSRTGKTMWA 230



 Score = 62.4 bits (150), Expect(2) = 4e-23
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+YNNDAWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKVYNNDAWYNVI 259



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 60/190 (31%), Positives = 79/190 (41%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQICLDD---------DAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT++WGEFQI             DAYA ALN+GSK E ALR+IK +     +     
Sbjct: 105 KDGDTLDWGEFQIDGRSARGGHQSAYDAYAAALNAGSKSE-ALRVIKELAPKDYVLQFHN 163

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+    +   P  L   W    V +   +   P  +++    
Sbjct: 164 LNANLDRIFTPPMEVYVSPFLSSSLNQVPEELE-EWAADNVVSAAARPLRPVSIVIEGDS 222

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 223 RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 282

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 283 NTKYGKPVQI 292


>emb|CAD97701.1| replication-related protein [Tobacco leaf curl Yunnan virus -
           [Y161]]
          Length = 362

 Score = 73.2 bits (178), Expect(2) = 7e-23
 Identities = 66/196 (33%), Positives = 85/196 (43%), Gaps = 48/196 (24%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPTRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAQALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSN---IYSTNKNICFTLFYHHHL--IMSHLTGFG--------------- 210
           KD+V QFHNLN+N   IY+    +  + F       +   L  +                
Sbjct: 156 KDFVLQFHNLNANLDRIYAPPLEVFVSPFLSSSFDQVPEELEEWAADNVRHAAARPWRPI 215

Query: 209 ---LGGCSRTGKTLWA 171
              + G SRTGKT+WA
Sbjct: 216 SIVIEGESRTGKTMWA 231



 Score = 60.5 bits (145), Expect(2) = 7e-23
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+NDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKVYSNDAWYNVI 260



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 62/192 (32%), Positives = 78/192 (40%), Gaps = 60/192 (31%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT+EWGEFQI            +DAYA ALNSGSK E AL +IK +     +     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSE-ALNVIKELAPKDFVLQFHN 164

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWVVAAEQVKHCGP------------ 170
                 +I+ PP++ +VSP+        P  L   W  AA+ V+H               
Sbjct: 165 LNANLDRIYAPPLEVFVSPFLSSSFDQVPEELE-EW--AADNVRHAAARPWRPISIVIEG 221

Query: 169 ---T*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRHW 80
              T   +W+    P N     L                  V  HYL         QR W
Sbjct: 222 ESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW 281

Query: 79  QSNTLYGKPIQI 44
           QSNT YGKPIQI
Sbjct: 282 QSNTKYGKPIQI 293


>gb|ABG26097.1| rep protein [Sida leaf curl virus]
          Length = 364

 Score = 72.0 bits (175), Expect(2) = 2e-22
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN 456
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPNRSAHFHPN 90



 Score = 60.5 bits (145), Expect(2) = 2e-22
 Identities = 62/190 (32%), Positives = 79/190 (41%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT++WGEFQI            +DAYA ALNSGSK  EALR+I+ +     +     
Sbjct: 106 KDGDTLDWGEFQIDGRSARGGQQTANDAYAQALNSGSK-SEALRVIRELAPKDFVLQFHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+        P  L   W    V A   +   P  L+V    
Sbjct: 165 LNANLDRIFTPPMEVYVSPFLSSSFDRVPEELE-EWAAENVVAAAARPLRPLSLVVEGDS 223

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  H+L         QR WQS
Sbjct: 224 RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQS 283

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 284 NTKYGKPVQI 293


>gb|AGV74354.1| replication protein [Tomato leaf curl Hainan virus]
          Length = 362

 Score = 70.5 bits (171), Expect(2) = 1e-21
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN 456
           KKYIKICRE HE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN
Sbjct: 41  KKYIKICREFHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPNRSAHFHPN 90



 Score = 58.9 bits (141), Expect(2) = 1e-21
 Identities = 60/190 (31%), Positives = 77/190 (40%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT++WGEFQI            +DAYA ALN+GSK  EAL +IK +     +     
Sbjct: 106 KDGDTIDWGEFQIDGRSARGGQQSANDAYAAALNTGSK-SEALNVIKELAPKDFVLQFHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+        P  L   W    V     +   P  ++V    
Sbjct: 165 LNANLDRIFTPPMEVYVSPFLSSSFDRVPEELE-EWAAENVVGAAARPLRPMSIVVEGDS 223

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 224 RTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 283

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 284 NTKYGKPVQI 293



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PKIY+NDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKIYSNDAWYNVI 260


>emb|CBA18491.1| replication-associated protein [Ageratum enation virus]
          Length = 361

 Score = 70.1 bits (170), Expect(3) = 4e-20
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN 456
           KKYIKICRELHENG+PHL  +V++Q E KY C  NNR FD+V  + S  FHPN
Sbjct: 41  KKYIKICRELHENGEPHL--HVLIQFEGKYKC-QNNRFFDLVSPTRSAHFHPN 90



 Score = 53.9 bits (128), Expect(3) = 4e-20
 Identities = 61/190 (32%), Positives = 76/190 (40%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DA A ALN+GSK E A+ IIK       I     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSK-EAAMAIIKEKLPKKFIFQYHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+           L   WV   V A   +   P  +++    
Sbjct: 165 LNANLDRIFTPPLEVYVSPFLSSSFDQVTEELE-EWVSENVMAAAARPLRPQSIVIGGDS 223

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 224 RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 283

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 284 NTKYGKPVQI 293



 Score = 20.4 bits (41), Expect(3) = 4e-20
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 639 QNLSLPVNKK 610
           QNL  PVNKK
Sbjct: 33  QNLQTPVNKK 42



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+NDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKVYSNDAWYNVI 260


>gb|AGI62915.1| C1 protein [Tomato leaf curl virus-[Australia:Aurukun:2003]]
          Length = 362

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 55/133 (41%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q E KYVCT N R FD+V  + S  FHPN +  K  
Sbjct: 41  KKYIKICRELHENGEPHL--HVLIQFEGKYVCT-NQRFFDLVSPTRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------K 327
               S + +  D L     +      + GG  S N+                       K
Sbjct: 98  SDVKSYLEKDGDTLDWGEFQIDGRSAR-GGQQSANDAYAQALNTGSKSEALNVLRELAPK 156

Query: 326 DYVCQFHNLNSNI 288
           DYV QFHNLNSN+
Sbjct: 157 DYVLQFHNLNSNL 169



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PKIY+NDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKIYSNDAWYNVI 260


>gb|AHH24774.1| AC1 [Ageratum yellow vein China virus]
          Length = 362

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 55/134 (41%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  S S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPSRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAKALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSNI 288
           KD+V QFHNLNSN+
Sbjct: 156 KDFVLQFHNLNSNL 169



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+YNNDAWYNVI
Sbjct: 234 LGPHNYLCGHLDLSPKVYNNDAWYNVI 260



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 58/189 (30%), Positives = 74/189 (39%), Gaps = 57/189 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALNSGSK  EAL +IK +     +     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAYAKALNSGSK-SEALNVIKELAPKDFVLQFHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*L------------GLGWVVAAEQVKHCGP 170
                 +IF PP++ +V P+        P  L               W   +  ++    
Sbjct: 165 LNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVRDAAARPWRPKSIVIEGDSR 224

Query: 169 T*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQSN 71
           T   +W+    P N     L                  V  HYL         QR WQSN
Sbjct: 225 TGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSN 284

Query: 70  TLYGKPIQI 44
           T YGKPIQI
Sbjct: 285 TKYGKPIQI 293


>emb|CAH18985.1| rep protein [Tobacco leaf curl Yunnan virus]
          Length = 294

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPTRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKAGDTLEWGEFQIDG--RSARGGQQTANDAYAQALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSNI 288
           KD+V QFHNLN+N+
Sbjct: 156 KDFVLQFHNLNANL 169



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+NDAWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKVYSNDAWYNVI 259



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 61/191 (31%), Positives = 78/191 (40%), Gaps = 59/191 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           ++GDT+EWGEFQI            +DAYA ALNSGSK  EAL +IK +     +     
Sbjct: 106 KAGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSK-SEALNVIKELAPKDFVLQFHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*LGLGWVVAAEQVKHC-------------- 176
                 +IF PP++ +VSP+        P  L   W  AA+ V+H               
Sbjct: 165 LNANLDRIFAPPLEVFVSPFLSSSFDQVPEELE-EW--AADNVRHAARPWRPISIVIEGE 221

Query: 175 GPT*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQ 77
             T   +W+    P N     L                     HYL         QR WQ
Sbjct: 222 SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDADPHYLKHFKEFMGAQRDWQ 281

Query: 76  SNTLYGKPIQI 44
           SNT YGKP+QI
Sbjct: 282 SNTKYGKPVQI 292


>emb|CAD54833.1| Rep protein [Tobacco leaf curl Yunnan virus - [Y143]]
          Length = 363

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 49/197 (24%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPTRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAQALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSN---IYSTNKNICFTLFYHHHLIMSHLTGFGLG--------------- 204
           KD+V QFHNLN+N   I++    +  + F+   + +        G               
Sbjct: 156 KDFVLQFHNLNANLDRIFAPPLEVFVSSFFIFIIWIKFPKNLKSGLLDNVRHAAARPWRP 215

Query: 203 ------GCSRTGKTLWA 171
                 G SRTGKT+WA
Sbjct: 216 ISIVIEGESRTGKTMWA 232



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 64/193 (33%), Positives = 80/193 (41%), Gaps = 61/193 (31%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT+EWGEFQI            +DAYA ALNSGSK E AL +IK +     +     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSE-ALNVIKELAPKDFVLQFHN 164

Query: 295 ------QIFTPPIKTYVSPYFIIII**-CPT*LGLGWVVAAEQVKHCGP----------- 170
                 +IF PP++ +VS +FI II    P  L  G +   + V+H              
Sbjct: 165 LNANLDRIFAPPLEVFVSSFFIFIIWIKFPKNLKSGLL---DNVRHAAARPWRPISIVIE 221

Query: 169 ----T*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRH 83
               T   +W+    P N     L                  V  HYL         QR 
Sbjct: 222 GESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRD 281

Query: 82  WQSNTLYGKPIQI 44
           WQSNT YGKPIQI
Sbjct: 282 WQSNTKYGKPIQI 294


>emb|CAQ58591.1| Rep [Tomato leaf curl Pakistan virus]
          Length = 360

 Score = 70.9 bits (172), Expect(2) = 5e-11
 Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRE HENG+PHL  +V++Q E KY C  NNR FD+V  + S  FHPN +  K  
Sbjct: 40  KKYIKICREFHENGEPHL--HVLIQFEGKYKC-QNNRFFDLVSPTRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------K 327
               S + +  D L     +      + GG  S N+                       K
Sbjct: 97  SDVKSYLEKDGDTLDWGEFQIDGRSAR-GGQQSANDAYAAALNAGSKSEALRVIKELAPK 155

Query: 326 DYVCQFHNLNSNI 288
           DYV QFHNLN+N+
Sbjct: 156 DYVLQFHNLNTNL 168



 Score = 22.7 bits (47), Expect(2) = 5e-11
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 642 FQNLSLPVNKK 610
           FQNL  PVNKK
Sbjct: 31  FQNLQTPVNKK 41



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 63/192 (32%), Positives = 78/192 (40%), Gaps = 60/192 (31%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT++WGEFQI            +DAYA ALN+GSK E ALR+IK +     +     
Sbjct: 105 KDGDTLDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSE-ALRVIKELAPKDYVLQFHN 163

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWVVAAEQVKHCGP------------ 170
                 +IFTPP++ YVSP+        P  L    V AAE V                 
Sbjct: 164 LNTNLDRIFTPPVEVYVSPFSSSSFDQVPEELE---VWAAENVVDAAARPLRPKSIVIEG 220

Query: 169 ---T*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRHW 80
              T   +W+    P N     L                  V  HYL         QR W
Sbjct: 221 DSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNQAWYNVIDDVDPHYLKHFKEFMGAQRDW 280

Query: 79  QSNTLYGKPIQI 44
           QSNT YGKP+QI
Sbjct: 281 QSNTKYGKPVQI 292


>emb|CAI64614.1| replication-associated protein [Sri Lankan cassava mosaic virus]
          Length = 351

 Score = 73.2 bits (178), Expect(2) = 5e-11
 Identities = 65/194 (33%), Positives = 88/194 (45%), Gaps = 47/194 (24%)
 Frame = -2

Query: 611 KYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDGE 435
           K+IKICRELH+NG+PHL  + ++Q E K   T NNRQFD VH SSST FHPN +S K   
Sbjct: 41  KFIKICRELHQNGEPHL--HALLQFEGKLTIT-NNRQFDCVHPSSSTGFHPNIQSAKSSS 97

Query: 434 WRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------KD 324
              S + +  D +     +      + GG  S N+                       KD
Sbjct: 98  DVKSYIDKDGDTIDWGEFQIDGRSAR-GGQQSANDAYAAALNTGSKPEALRVIKELAPKD 156

Query: 323 YVCQFHNLNSN---IYSTNKNICFTLFYH----------HHLIMSHLTGFG--------- 210
           YV QFHNLN+N   I++    +  + F               +  ++ G           
Sbjct: 157 YVLQFHNLNANLDRIFTPPPEVYVSPFSASSFDQVPDELEEWVSENVMGASARPLRPNSM 216

Query: 209 -LGGCSRTGKTLWA 171
            + G SRTGKT+WA
Sbjct: 217 VIEGDSRTGKTMWA 230



 Score = 20.4 bits (41), Expect(2) = 5e-11
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 645 FFQNLSLPVNKK 610
           FF++LSLP N K
Sbjct: 30  FFRSLSLPTNIK 41



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 61/190 (32%), Positives = 78/190 (41%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT++WGEFQI            +DAYA ALN+GSK E ALR+IK +     +     
Sbjct: 105 KDGDTIDWGEFQIDGRSARGGQQSANDAYAAALNTGSKPE-ALRVIKELAPKDYVLQFHN 163

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP + YVSP+        P  L   WV   V     +   P  +++    
Sbjct: 164 LNANLDRIFTPPPEVYVSPFSASSFDQVPDELE-EWVSENVMGASARPLRPNSMVIEGDS 222

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 223 RTGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 282

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 283 NTKYGKPVQI 292


>emb|CAI96156.1| AC1 protein [Tobacco leaf curl Yunnan virus-[Y283]]
          Length = 362

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHE+G PHL  +V++Q E KYVCT NNR FD+V  + S  FHPN +  K  
Sbjct: 41  KKYIKICRELHEDGSPHL--HVLIQFEGKYVCT-NNRFFDLVSPTRSAHFHPNIQGAKSS 97

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 98  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAQALNSGSKSEALNVIKELAP 155

Query: 329 KDYVCQFHNLNSNI 288
           KD+V QFHNLN+N+
Sbjct: 156 KDFVLQFHNLNANL 169



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 63/192 (32%), Positives = 78/192 (40%), Gaps = 60/192 (31%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALNSGSK  EAL +IK +     +     
Sbjct: 106 KDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSK-SEALNVIKELAPKDFVLQFHN 164

Query: 301 ----*IQIFTPPIKTYVSPYFIIII**CPT*LGLGWVVAAEQVKHCGP------------ 170
                 +IF PP++ +VSP+        P  L   W  AA+ V+H               
Sbjct: 165 LNANLDRIFAPPLEVFVSPFLSSSFDQVPEELE-EW--AADNVRHAAARPWRPISIVIEG 221

Query: 169 ---T*LLVWSP*FNPQNIQ**CL------------------VQRHYL---------QRHW 80
              T   +W+    P N     L                  V  HYL         QR W
Sbjct: 222 ESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW 281

Query: 79  QSNTLYGKPIQI 44
           QSNT YGKPIQI
Sbjct: 282 QSNTKYGKPIQI 293


>ref|YP_004123721.1| replicase [Okra enation leaf curl virus [India:Munthal EL37:2006]]
           gi|308743542|gb|ADO40477.1| replicase [Okra enation leaf
           curl virus [India:Munthal EL37:2006]]
          Length = 362

 Score = 59.3 bits (142), Expect(2) = 9e-11
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PKIY+N+AWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKIYSNEAWYNVI 259



 Score = 33.5 bits (75), Expect(2) = 9e-11
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 91  QRHWQSNTLYGKPIQI 44
           QR WQSNT YGKP+QI
Sbjct: 277 QRDWQSNTKYGKPVQI 292



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 53/134 (39%), Positives = 65/134 (48%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q+E KY C  N R FD+V  S S  FHPN +  K  
Sbjct: 40  KKYIKICRELHENGEPHL--HVLIQIEGKYKC-QNQRFFDLVSPSRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 97  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAAALNAGSKSEALRVIKELAP 154

Query: 329 KDYVCQFHNLNSNI 288
           KDYV QFHNLN+N+
Sbjct: 155 KDYVLQFHNLNANL 168



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALN+GSK  EALR+IK +     +     
Sbjct: 105 KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSK-SEALRVIKELAPKDYVLQFHN 163

Query: 301 ----*IQIFTPPIKTYVSPY 254
                 +IFTPP++ YVSP+
Sbjct: 164 LNANLDRIFTPPVEVYVSPF 183


>gb|AFA26469.2| replication-associated protein [Pedilanthus leaf curl
           virus-[Cestrum nocturnum]]
          Length = 390

 Score = 69.7 bits (169), Expect(2) = 1e-10
 Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KK+IKICRELHE+G PHL  +V++Q E KY C  NNR FD+V  + S  FHPN +  K  
Sbjct: 70  KKFIKICRELHEDGSPHL--HVLIQFEGKYKC-QNNRFFDLVSPTRSAHFHPNIQGAKSS 126

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------K 327
               S M +  D L     +      + GG  S N+                       K
Sbjct: 127 SDVKSYMEKDGDTLDWGEFQIDGRSAR-GGQQSANDAYAAAINTGSKSEALRVIKEIAPK 185

Query: 326 DYVCQFHNLNSNI 288
           DYV QFHNLN+N+
Sbjct: 186 DYVLQFHNLNANL 198



 Score = 22.7 bits (47), Expect(2) = 1e-10
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 642 FQNLSLPVNKK 610
           FQNLS P NKK
Sbjct: 61  FQNLSTPTNKK 71



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNY+CGHLDL PK+YNND WYNVI
Sbjct: 263 LGPHNYMCGHLDLSPKVYNNDVWYNVI 289



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 59/190 (31%), Positives = 78/190 (41%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT++WGEFQI            +DAYA A+N+GSK E ALR+IK +     +     
Sbjct: 135 KDGDTLDWGEFQIDGRSARGGQQSANDAYAAAINTGSKSE-ALRVIKEIAPKDYVLQFHN 193

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+        P  L   W    V     +   P  +++    
Sbjct: 194 LNANLDRIFTPPVEVYVSPFCSSSFDQVPDELE-EWAAENVVGSAARPLRPISIVIEGDS 252

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 253 RTGKTMWARSLGPHNYMCGHLDLSPKVYNNDVWYNVIEDVDPHYLKHFKEFMGAQRDWQS 312

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 313 NTKYGKPVQI 322


>gb|AFA26437.2| replication-associated protein [Pedilanthus leaf curl virus-[Crape
           Jasmine]]
          Length = 390

 Score = 69.7 bits (169), Expect(2) = 1e-10
 Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KK+IKICRELHE+G PHL  +V++Q E KY C  NNR FD+V  + S  FHPN +  K  
Sbjct: 70  KKFIKICRELHEDGSPHL--HVLIQFEGKYKC-QNNRFFDLVSPTRSAHFHPNIQGAKSS 126

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN-----------------------K 327
               S M +  D L     +      + GG  S N+                       K
Sbjct: 127 SDVKSYMEKDGDTLDWGEFQIDGRSAR-GGQQSANDAYAAAINTGSKSEALRVIKEIAPK 185

Query: 326 DYVCQFHNLNSNI 288
           DYV QFHNLN+N+
Sbjct: 186 DYVLQFHNLNANL 198



 Score = 22.7 bits (47), Expect(2) = 1e-10
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 642 FQNLSLPVNKK 610
           FQNLS P NKK
Sbjct: 61  FQNLSTPTNKK 71



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLC HLDL PK+YNNDAWYNVI
Sbjct: 263 LGPHNYLCRHLDLSPKVYNNDAWYNVI 289



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 59/190 (31%), Positives = 78/190 (41%), Gaps = 58/190 (30%)
 Frame = -3

Query: 439 ESGDTVEWGEFQIC---------LDDDAYAIALNSGSKEEEALRIIKIMFASSII*I--- 296
           + GDT++WGEFQI            +DAYA A+N+GSK E ALR+IK +     +     
Sbjct: 135 KDGDTLDWGEFQIDGRSARGGQQSANDAYAAAINTGSKSE-ALRVIKEIAPKDYVLQFHN 193

Query: 295 ------QIFTPPIKTYVSPYFIIII**CPT*LGLGWV---VAAEQVKHCGPT*LLV---- 155
                 +IFTPP++ YVSP+        P  L   W    V     +   P  +++    
Sbjct: 194 LNANLDRIFTPPVEVYVSPFCSSSFDQVPDELE-EWAAENVVGSAARPLRPISIVIEGDS 252

Query: 154 ------WSP*FNPQNIQ**CL------------------VQRHYL---------QRHWQS 74
                 W+    P N     L                  V  HYL         QR WQS
Sbjct: 253 RTGKTMWARSLGPHNYLCRHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS 312

Query: 73  NTLYGKPIQI 44
           NT YGKP+QI
Sbjct: 313 NTKYGKPVQI 322


>emb|CCP46971.1| replication associated protein [Mesta yellow vein mosaic virus]
          Length = 362

 Score = 58.9 bits (141), Expect(2) = 1e-10
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+N+AWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKVYSNEAWYNVI 259



 Score = 33.5 bits (75), Expect(2) = 1e-10
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 91  QRHWQSNTLYGKPIQI 44
           QR WQSNT YGKP+QI
Sbjct: 277 QRDWQSNTKYGKPVQI 292



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 53/134 (39%), Positives = 64/134 (47%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q E KY C  N R FD+V  S S  FHPN +  K  
Sbjct: 40  KKYIKICRELHENGEPHL--HVLIQFEGKYKC-QNQRFFDLVSPSRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 97  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAAALNAGSKSEALRVIKELAP 154

Query: 329 KDYVCQFHNLNSNI 288
           KDYV QFHNLN+N+
Sbjct: 155 KDYVLQFHNLNANL 168



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALN+GSK  EALR+IK +     +     
Sbjct: 105 KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSK-SEALRVIKELAPKDYVLQFHN 163

Query: 301 ----*IQIFTPPIKTYVSPY 254
                 +IFTPP++ YVSP+
Sbjct: 164 LNANLDRIFTPPVEVYVSPF 183


>gb|AGG37200.1| Rep [Okra enation leaf curl virus]
          Length = 362

 Score = 58.9 bits (141), Expect(2) = 1e-10
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+N+AWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKVYSNEAWYNVI 259



 Score = 33.5 bits (75), Expect(2) = 1e-10
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 91  QRHWQSNTLYGKPIQI 44
           QR WQSNT YGKP+QI
Sbjct: 277 QRDWQSNTKYGKPVQI 292



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 53/134 (39%), Positives = 64/134 (47%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q E KY C  N R FD+V  S S  FHPN +  K  
Sbjct: 40  KKYIKICRELHENGEPHL--HVLIQFEGKYKC-QNQRFFDLVSPSRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 97  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAAALNAGSKSEALRVIKELAP 154

Query: 329 KDYVCQFHNLNSNI 288
           KDYV QFHNLN+N+
Sbjct: 155 KDYVLQFHNLNANL 168



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALN+GSK  EALR+IK +     +     
Sbjct: 105 KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSK-SEALRVIKELAPKDYVLQFHN 163

Query: 301 ----*IQIFTPPIKTYVSPY 254
                 +IFTPP++ YVSP+
Sbjct: 164 LNANLDRIFTPPVEVYVSPF 183


>gb|AFQ55288.1| replication associated protein [Mesta yellow vein mosaic virus]
          Length = 362

 Score = 58.9 bits (141), Expect(2) = 1e-10
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -1

Query: 177 VGPHNYLCGHLDLIPKIYNNDAWYNVI 97
           +GPHNYLCGHLDL PK+Y+N+AWYNVI
Sbjct: 233 LGPHNYLCGHLDLSPKVYSNEAWYNVI 259



 Score = 33.5 bits (75), Expect(2) = 1e-10
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 91  QRHWQSNTLYGKPIQI 44
           QR WQSNT YGKP+QI
Sbjct: 277 QRDWQSNTKYGKPVQI 292



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 53/134 (39%), Positives = 64/134 (47%), Gaps = 25/134 (18%)
 Frame = -2

Query: 614 KKYIKICRELHENGKPHLYVYVVVQLEEKYVCTNNNRQFDIVHQSSSTSFHPN-RSPKDG 438
           KKYIKICRELHENG+PHL  +V++Q E KY C  N R FD+V  S S  FHPN +  K  
Sbjct: 40  KKYIKICRELHENGEPHL--HVLIQFEGKYKC-QNQRFFDLVSPSRSAHFHPNIQGAKSS 96

Query: 437 EWRHS*MGRVSDLLR**CLRNST*LRQ*GGGGSPNN------------------------ 330
               S + +  D L     +     R   GG    N                        
Sbjct: 97  SDVKSYIDKDGDTLEWGEFQIDG--RSARGGQQTANDAYAAALNAGSKSEALRVIKELAP 154

Query: 329 KDYVCQFHNLNSNI 288
           KDYV QFHNLN+N+
Sbjct: 155 KDYVLQFHNLNANL 168



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
 Frame = -3

Query: 439 ESGDTVEWGEFQI---------CLDDDAYAIALNSGSKEEEALRIIKIMFASSII----- 302
           + GDT+EWGEFQI            +DAYA ALN+GSK  EALR+IK +     +     
Sbjct: 105 KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSK-SEALRVIKELAPKDYVLQFHN 163

Query: 301 ----*IQIFTPPIKTYVSPY 254
                 +IFTPP++ YVSP+
Sbjct: 164 LNANLDRIFTPPVEVYVSPF 183