BLASTX nr result

ID: Achyranthes23_contig00039194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00039194
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    93   2e-17
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]    91   2e-17
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]    89   2e-16
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]    89   6e-16
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    79   8e-13
emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]    77   3e-12
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    65   7e-09
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    65   9e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    65   1e-08
ref|XP_006299226.1| hypothetical protein CARUB_v10015375mg, part...    64   2e-08
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    64   2e-08
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    62   8e-08
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    61   1e-07
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    61   2e-07
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    60   2e-07
emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]    59   9e-07
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]    58   1e-06
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    56   6e-06
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    56   6e-06
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    55   7e-06

>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 92.8 bits (229), Expect(2) = 2e-17
 Identities = 48/108 (44%), Positives = 61/108 (56%)
 Frame = +1

Query: 79  SHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANA 258
           S + C HC K GHD N+C+E +GYPE W ++ K   G GR      Q  GRG  S  ANA
Sbjct: 281 SLVACPHCHKHGHDKNNCYEIVGYPEGWLDQNKADGGAGRSR----QQAGRGRGSARANA 336

Query: 259 TAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNG 402
                 +  T G ++  +S   +FT +QWKALA + GN  V NDRLNG
Sbjct: 337 ------ASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQVPNDRLNG 378



 Score = 21.9 bits (45), Expect(2) = 2e-17
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 15  KDEGPEVVGFAVRT 56
           +D+  EV+GFAVRT
Sbjct: 239 EDKPAEVLGFAVRT 252


>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score = 90.9 bits (224), Expect(2) = 2e-17
 Identities = 47/108 (43%), Positives = 61/108 (56%)
 Frame = +1

Query: 79  SHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANA 258
           S + C HC K GHD N+C+E +GYPE W ++ K   G GR      Q  GRG  S  ANA
Sbjct: 248 SLVACPHCHKHGHDKNNCYEIVGYPEGWLDQNKADGGAGRSR----QQAGRGRGSARANA 303

Query: 259 TAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNG 402
                 +  T G ++  +S   +FT +QWKALA + GN  V +DRLNG
Sbjct: 304 ------ASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQVPDDRLNG 345



 Score = 23.5 bits (49), Expect(2) = 2e-17
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 15  KDEGPEVVGFAVRT 56
           KD+  EV+GFAVRT
Sbjct: 206 KDKPAEVLGFAVRT 219


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score = 89.4 bits (220), Expect(2) = 2e-16
 Identities = 46/108 (42%), Positives = 60/108 (55%)
 Frame = +1

Query: 79  SHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANA 258
           S + C HC K GHD N+C+E +GYPE W ++ K   G GR      Q  GRG  S  ANA
Sbjct: 196 SXVACPHCHKHGHDKNNCYEIVGYPEGWLDQNKADGGAGRSR----QQAGRGRGSXHANA 251

Query: 259 TAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNG 402
                 +  T G ++  +S   +FT +QWKAL  + GN  V +DRLNG
Sbjct: 252 ------ASSTIGASSTKSSTDQLFTPEQWKALXGLIGNAQVPDDRLNG 293



 Score = 21.9 bits (45), Expect(2) = 2e-16
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 15  KDEGPEVVGFAVRT 56
           +D+  EV+GFAVRT
Sbjct: 154 EDKPAEVLGFAVRT 167


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/108 (42%), Positives = 59/108 (54%)
 Frame = +1

Query: 79  SHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANA 258
           S + C HC K GHD N+C+E +GYPE W ++ K   G GR      Q  GRG  S   N 
Sbjct: 280 SXVACPHCHKHGHDKNNCYEIVGYPEGWLDQNKADGGAGRSR----QQAGRGRGSARXN- 334

Query: 259 TAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNG 402
                T+  T G ++  +S   +FT +QWKALA + GN  V  DRLNG
Sbjct: 335 -----TASSTIGASSTKSSTDQLFTPEQWKALAGLIGNAQVPYDRLNG 377


>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
           sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X2 [Citrus
           sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X3 [Citrus
           sinensis]
          Length = 320

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
 Frame = +1

Query: 64  EVVGESHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSS-GRGRPSSSFLQSRGRG-- 234
           E+  +S +IC HC+K GHD +SCF+ IGYPEWW +R +    G GR      Q   +G  
Sbjct: 191 EIREKSSVICKHCRKTGHDADSCFQLIGYPEWWGDRSRTGGRGAGRGQGGQRQGIAQGGK 250

Query: 235 --GSSVCANATAISSTSEGTTG--MNNNNTSAPSVFTADQWKALASVFGNINVSN-DRLN 399
             GS + ANA  ++S   G  G  ++ + T    + + +QW  L ++  +    N ++LN
Sbjct: 251 GRGSQIKANAAHVTSEGSGIQGHVLDADKTGLKGL-SNEQWSMLLNLLNSQTEKNQEKLN 309

Query: 400 GPN-EEAD 420
           GP+ E+AD
Sbjct: 310 GPHFEDAD 317


>emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
          Length = 992

 Score = 76.6 bits (187), Expect(2) = 3e-12
 Identities = 41/97 (42%), Positives = 54/97 (55%)
 Frame = +1

Query: 112 GHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANATAISSTSEGTT 291
           GHD N+C+E +GY E W ++ K   G GR      Q  GRG  S  ANA +       T 
Sbjct: 221 GHDKNNCYEIVGYHEGWLDQNKADGGVGRSR----QQAGRGRGSARANAAS------STI 270

Query: 292 GMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNG 402
           G ++  +S   +FT +QWKALA + GN  V +DRLNG
Sbjct: 271 GASSTKSSTDQLFTPEQWKALAGLIGNAQVPDDRLNG 307



 Score = 20.4 bits (41), Expect(2) = 3e-12
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 15  KDEGPEVVGFAVRT 56
           +D+  +V+GFAVRT
Sbjct: 194 EDKPTKVLGFAVRT 207


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +1

Query: 85  LICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANATA 264
           ++C HC + GH+   C++ +G+P+WW ER   ++G GR SS    SRGRGG S  +N + 
Sbjct: 278 VLCSHCGRSGHEKKDCWQIVGFPDWWTER---TNGGGRGSS----SRGRGGRSSGSNNSG 330

Query: 265 ISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGN-INVSNDRLNGPNEEAD 420
                        +N S+   FT DQ + +  +  N  N ++D+L+G  +  D
Sbjct: 331 RGRGQVTAAHATTSNLSSFPEFTPDQLRVITQMIQNKNNGTSDKLSGKMKLGD 383


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
 Frame = +1

Query: 85  LICVHCKKIGHDINSCFEKIGYPEWWEERMKQ-----SSGRGR-PSSSFLQSRGRGGSSV 246
           +IC +CK+ GH+++SCF++I YPEWW +R +      S G GR         RGRGG++ 
Sbjct: 216 VICSNCKRKGHEVDSCFQRIAYPEWWGDRPRTTTSGCSGGHGRGVQQGTGGGRGRGGTA- 274

Query: 247 CANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVF-GNINVSNDRLNG 402
            AN      T  G + + ++N +  S  +  QW  L ++   +   +N+RL G
Sbjct: 275 RANVVQTLGTDGGRSVVTDSNRTGISGLSDKQWTTLLTMLNSHKGGANERLIG 327


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = +1

Query: 85  LICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANATA 264
           ++C HC + GH+   C++ +G+P+WW ER   ++G GR SS    SRGRGG S  +N + 
Sbjct: 278 VLCSHCGRSGHEKKDCWQIVGFPDWWTER---TNGGGRGSS----SRGRGGRSSGSNNSG 330

Query: 265 ISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGN-INVSNDRLNGPNEEAD 420
                        +N S    FT DQ + +  +  N  N ++D+L+G  +  D
Sbjct: 331 RGRGQVTAAHATTSNLSPFPEFTPDQLRVITQMIQNKNNGTSDKLSGKMKLGD 383


>ref|XP_006299226.1| hypothetical protein CARUB_v10015375mg, partial [Capsella rubella]
           gi|482567935|gb|EOA32124.1| hypothetical protein
           CARUB_v10015375mg, partial [Capsella rubella]
          Length = 361

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
 Frame = +1

Query: 34  WLVLQSALVEEVVGESHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSF 213
           +L L+S +      +S L+C  C + GH   +CF+ IGYPEWW +R ++    GR +   
Sbjct: 230 FLALRSDVSVGNTNKSKLVCSSCTRTGHTAETCFQVIGYPEWWGDRSRRGGRGGREA--- 286

Query: 214 LQSRGRGGSSVCANA--------TAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFG 369
              RGR GS   ANA         ++ +   G TG+ N           +QW  L   F 
Sbjct: 287 --GRGR-GSIPRANAVVAQPLHDVSVEAERSGYTGLTN-----------EQWSTLIKFFD 332

Query: 370 NINVSNDRLNGPNEEAD 420
               ++ RLNG +   D
Sbjct: 333 EKQGTSTRLNGMSLSLD 349


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/95 (33%), Positives = 49/95 (51%)
 Frame = +1

Query: 43  LQSALVEEVVGESHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQS 222
           +QS+       +S L C HC + GH++  CF   GYP+WW   ++Q+    +PS+    S
Sbjct: 244 VQSSTTPRFRDKSTLFCTHCNRKGHEVTQCFLVHGYPDWW---LEQNPQENQPSTRGRGS 300

Query: 223 RGRGGSSVCANATAISSTSEGTTGMNNNNTSAPSV 327
            GRG SS      + + T+ G    NN   +AP+V
Sbjct: 301 NGRGSSSGRGGNRSSAPTTRGRGRANNAQAAAPTV 335


>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
 Frame = +1

Query: 91  CVHCKKIGHDINSCFEKIGYPEWWEERMK---QSSGRG----RPSSSFLQSRGRGGSSVC 249
           C HCK+ GHDI+SCF+ +GYP+WW +R +   ++ GRG    RP S  L+ RG       
Sbjct: 279 CSHCKRDGHDIDSCFQLVGYPDWWGDRPRSVGRALGRGKHVHRPMSGALKGRGNNAK--- 335

Query: 250 ANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFG-NINVSNDRLNGPN 408
            N T +    + T  M   +       ++ QW AL +        ++ RL G N
Sbjct: 336 VNMTQV---VDDTEVMKYEDDQVLPGLSSKQWNALLNAINTQKGGTSTRLTGEN 386


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/106 (31%), Positives = 52/106 (49%)
 Frame = +1

Query: 46  QSALVEEVVGESHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSR 225
           QS++   +V    ++C HC + GH+   C+  +G+P+WW ER     G GR        R
Sbjct: 267 QSSIESSIVKSRPVLCSHCGRTGHEKKDCWSIVGFPDWWTERNGNGRGSGRGRGGRGAGR 326

Query: 226 GRGGSSVCANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASV 363
           G+ G  V A+AT             ++N S  + FT DQ +AL+ +
Sbjct: 327 GK-GQIVAAHAT-------------SSNPSPHTEFTPDQLRALSQL 358


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
 Frame = +1

Query: 76  ESHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSS--GRGRPSSSFLQSRGRGGSSVC 249
           +  ++C HC + GH   SC+  IGYPEWW +R +  S   RGR  ++    RGRG ++  
Sbjct: 172 DKSMVCKHCNRSGHASESCYAVIGYPEWWGDRPRSRSLQTRGRGGTNSSGGRGRGAAAYA 231

Query: 250 ANATAIS--STSEGTTGMNNNNTSAPSVFTADQWKALASVFGN 372
              T  +  +  +    + + +    +  T  QW+ + S+  +
Sbjct: 232 NRVTVPNHDTYEQANYALTDEDRDGVNGLTDSQWRTIKSILNS 274


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
 Frame = +1

Query: 91  CVHCKKIGHDINSCFEKIGYPEWWEER-MKQSSGRGRPSSSFLQSRGRGGSSVCANATAI 267
           C HC K GHD+  CF+  GYP+WW  R M +  GRGR  +S+       G     NA A 
Sbjct: 147 CTHCGKTGHDVADCFQLKGYPDWWPTRQMGRGRGRGRGRNSYAGRGATSGRVHYXNAVAE 206

Query: 268 SSTSE--GTTGMNNNNTSAPSVFTADQWKALASVFGNINVSNDRLNGPNE 411
           + T E     G +      P +   D ++ L ++  N + + ++L G N+
Sbjct: 207 ADTQEKGQCVGHDVERNIIPGL-NDDNFQKLMALLRNGSSNAEKLTGKNK 255


>emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]
          Length = 616

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
 Frame = +1

Query: 76  ESHLICVHCKKIGHDINSCFEKIGYPEWWEER-MKQSSGRGRPSSSFLQ-SRGRGGSSVC 249
           + +++C +CK+ GHD N+CF+ I YP+WW  R  K  SGRG            +GG +  
Sbjct: 39  DRNVVCTNCKREGHDANTCFQLIRYPKWWGNRPRKNVSGRGGGRKHGAHGGHDKGGIAQA 98

Query: 250 ANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVF-GNINVSNDRLNGPNEE 414
             AT   +  +G  G+N+           +QW  L  +   +   +N+RL G   +
Sbjct: 99  NAATTNDANKKGIVGLND-----------EQWATLMGMLSAHKTGTNERLMGKQSQ 143


>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
          Length = 758

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
 Frame = +1

Query: 85  LICVHCKKIGHDINSCFEKIGYPEWWEERMK-----QSSGRGRPSSSFLQSRG------- 228
           +IC +CK+ GH+++SCF++IGYPEWW +R +      S GRGR     LQ R        
Sbjct: 164 VICSNCKQKGHEVDSCFQRIGYPEWWGDRPRTTTGGHSDGRGRGVPVGLQDRNSRMLIGT 223

Query: 229 ----------RGGSSVCANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVFGNIN 378
                     +G + +CA  T    T   +  + +     PS    D    + SV GN  
Sbjct: 224 GKQCEGLYFLKGVALICAYET----TGIASYELWHRRMGHPSSRVVDLIYEVDSVGGNDG 279

Query: 379 VSN 387
           V N
Sbjct: 280 VKN 282


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = +1

Query: 91  CVHCKKIGHDINSCFEKIGYPEWWEERM-KQSSGRGRPSSSFLQSRGRG-GSSVCANATA 264
           C HC +  H  ++CF+  G PEW+ E+    SSGRGR  SS  + RGRG G+S  AN   
Sbjct: 275 CTHCGRSNHSADTCFKLHGVPEWYTEKYGDTSSGRGRGRSSTPRGRGRGHGNSYKANNAQ 334

Query: 265 ISSTSEGTTGMNNNNTSAPSVFTADQWKALASVF-GNINVSNDRLNGPNEEAD 420
            S  S   +  ++     P V + + W A+ ++   +   S+++L+G     D
Sbjct: 335 TSHPSSSASEFSD----IPGV-SKEAWSAIRNLLKQDTATSSEKLSGKTNCVD 382


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
 Frame = +1

Query: 79  SHLICVHCKKIGHDINSCFEKIGYPEWWEERMKQSSGRGRPSSSFLQSRGRGGSSVCANA 258
           S L C H  + GHDI  CF   GYP+WW E+   +   GR +S      GRG +    N 
Sbjct: 259 SSLTCTHYHRQGHDITECFLVHGYPDWWLEQNGSNGSAGRGTS------GRGNNGRGNNN 312

Query: 259 TAISSTSEGTTGMNNNN--------TSAPSVFTADQWKALASVF--GNINVSNDRLNG 402
               S+S G+ G    N        TS PS   ADQ   L S+    N   S+ +L+G
Sbjct: 313 RGGRSSSSGSRGKGRANAASTHPPPTSTPS--NADQINQLISLLQAQNPATSSQKLSG 368


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
 Frame = +1

Query: 88  ICVHCKKIGHDINSCFEKIGYPEWWEERMK----QSSGRGRPSS-SFLQSRGRGGS---- 240
           +C +C ++GH    CF+ IGYP W EE+++     SS RG  SS    QS GRG S    
Sbjct: 257 VCSNCGRVGHLAEQCFKLIGYPPWLEEKLRLKNTASSSRGGLSSFKGKQSHGRGSSINHV 316

Query: 241 SVCANATAISSTSEGTTGMNNNNTSAPSVFTADQWKALASVF-GNINVSNDRLNG 402
           +    A  + + S  T+ + +++    S     QWK L ++     + SND  +G
Sbjct: 317 ASSGMAANVVTNSSLTSPLTSDDRIGLSGLNDSQWKILQTILEERKSTSNDHQSG 371


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