BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00039131
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006440247.1| hypothetical protein CICLE_v10019985mg [Citr...   221   1e-55
ref|XP_006477135.1| PREDICTED: pentatricopeptide repeat-containi...   220   3e-55
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   213   4e-53
emb|CBI25851.3| unnamed protein product [Vitis vinifera]              213   4e-53
gb|EOY24258.1| Tetratricopeptide repeat-like superfamily protein...   213   5e-53
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   212   8e-53
gb|EMJ13638.1| hypothetical protein PRUPE_ppa016777mg, partial [...   204   1e-50
gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsu...   203   4e-50
ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
gb|EXC02094.1| hypothetical protein L484_024059 [Morus notabilis]     199   7e-49
ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|5...   196   5e-48
ref|XP_004515635.1| PREDICTED: pentatricopeptide repeat-containi...   185   8e-45
ref|XP_004300367.1| PREDICTED: pentatricopeptide repeat-containi...   185   8e-45
gb|ESW03282.1| hypothetical protein PHAVU_011G001300g [Phaseolus...   179   7e-43
ref|NP_199547.1| pentatricopeptide repeat-containing protein [Ar...   174   2e-41
ref|XP_002863348.1| pentatricopeptide repeat-containing protein ...   172   9e-41
ref|XP_003604902.1| Pentatricopeptide repeat-containing protein ...   172   9e-41
ref|XP_006282107.1| hypothetical protein CARUB_v10028355mg, part...   171   2e-40
ref|XP_006398426.1| hypothetical protein EUTSA_v10000870mg [Eutr...   169   6e-40
gb|ABD64962.1| PPR repeat containing protein [Brassica oleracea]      167   2e-39

>ref|XP_006440247.1| hypothetical protein CICLE_v10019985mg [Citrus clementina]
           gi|567895520|ref|XP_006440248.1| hypothetical protein
           CICLE_v10019985mg [Citrus clementina]
           gi|567895522|ref|XP_006440249.1| hypothetical protein
           CICLE_v10019985mg [Citrus clementina]
           gi|557542509|gb|ESR53487.1| hypothetical protein
           CICLE_v10019985mg [Citrus clementina]
           gi|557542510|gb|ESR53488.1| hypothetical protein
           CICLE_v10019985mg [Citrus clementina]
           gi|557542511|gb|ESR53489.1| hypothetical protein
           CICLE_v10019985mg [Citrus clementina]
          Length = 475

 Score =  221 bits (564), Expect = 1e-55
 Identities = 104/203 (51%), Positives = 147/203 (72%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYTS+IQ  C  G   EAL +L+RME   C PNRVT+S +++G C 
Sbjct: 259 EMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAFGCAPNRVTISTLIKGFCV 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +D+A++L++ VVAGG VSS  CYS LV+ L RTK  +EA+KLF  ML S V+PDGLA
Sbjct: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS+++ ++CL+ + ++ F LYED++K GF+ ++DS+I S LL+GLC +NH +E   LA  
Sbjct: 379 CSVMIRELCLRGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARF 438

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           M+++ I +   Y+D I +HLK S
Sbjct: 439 MLKKRIWLQGPYVDKIVEHLKKS 461


>ref|XP_006477135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like isoform X1 [Citrus sinensis]
           gi|568846596|ref|XP_006477136.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like isoform X2 [Citrus sinensis]
           gi|568846598|ref|XP_006477137.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like isoform X3 [Citrus sinensis]
          Length = 475

 Score =  220 bits (560), Expect = 3e-55
 Identities = 104/203 (51%), Positives = 146/203 (71%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYTS+IQ  C  G   EAL +L+RME   C PNRVT+S +++G C 
Sbjct: 259 EMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAPNRVTISTLIKGFCV 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +D+A++L++ VVAGG VSS  CYS LV+ L RTK  +EA+KLF  ML S V+PDGLA
Sbjct: 319 EGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLFSKMLASGVKPDGLA 378

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS+++ ++CL  + ++ F LYED++K GF+ ++DS+I S LL+GLC +NH +E   LA  
Sbjct: 379 CSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLCRKNHSVEAAKLARF 438

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           M+++ I +   Y+D I +HLK S
Sbjct: 439 MLKKRIWLQGPYVDKIVEHLKKS 461


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score =  213 bits (542), Expect = 4e-53
 Identities = 100/203 (49%), Positives = 144/203 (70%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYTS+IQ+ C+ GK +EAL +L+RM    C PNRVT+S++++G CA
Sbjct: 255 EMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCA 314

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +++AFKL++ VVAGG+VS  ECYS L++SL   K  +EA+KLFR ML ++V+PDGLA
Sbjct: 315 EGRVEEAFKLIDKVVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLA 374

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           C  L+  +CL+ R +D F L+++ +    +  +DS+I S LL+GL ++ H +E   LA  
Sbjct: 375 CGTLIKALCLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARL 434

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           MV+ GI +   Y D I +HLK S
Sbjct: 435 MVDRGIQLKTPYFDSIVEHLKES 457



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           PN+ITY ++I+  C  G+  +A  + + M+G  C PN V  +V+++G+C  G +++A +L
Sbjct: 193 PNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALEL 252

Query: 213 VNDV--VAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++   +G    +   Y+ ++ S        EA ++   M      P+ +  S+LM   
Sbjct: 253 LGEMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGF 312

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEGI 560
           C + R  +AF L + +   G V        S+L++ L    +  E E L   M+   +
Sbjct: 313 CAEGRVEEAFKLIDKVVAGGNVSY--GECYSSLIVSLVGNKNLQEAEKLFRRMLANAV 368


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  213 bits (542), Expect = 4e-53
 Identities = 100/203 (49%), Positives = 144/203 (70%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYTS+IQ+ C+ GK +EAL +L+RM    C PNRVT+S++++G CA
Sbjct: 261 EMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCA 320

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +++AFKL++ VVAGG+VS  ECYS L++SL   K  +EA+KLFR ML ++V+PDGLA
Sbjct: 321 EGRVEEAFKLIDKVVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLA 380

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           C  L+  +CL+ R +D F L+++ +    +  +DS+I S LL+GL ++ H +E   LA  
Sbjct: 381 CGTLIKALCLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARL 440

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           MV+ GI +   Y D I +HLK S
Sbjct: 441 MVDRGIQLKTPYFDSIVEHLKES 463



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           PN+ITY ++I+  C  G+  +A  + + M+G  C PN V  +V+++G+C  G +++A +L
Sbjct: 199 PNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALEL 258

Query: 213 VNDV--VAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++   +G    +   Y+ ++ S        EA ++   M      P+ +  S+LM   
Sbjct: 259 LGEMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGF 318

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEGI 560
           C + R  +AF L + +   G V        S+L++ L    +  E E L   M+   +
Sbjct: 319 CAEGRVEEAFKLIDKVVAGGNVSY--GECYSSLIVSLVGNKNLQEAEKLFRRMLANAV 374


>gb|EOY24258.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508777003|gb|EOY24259.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508777004|gb|EOY24260.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508777005|gb|EOY24261.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 483

 Score =  213 bits (541), Expect = 5e-53
 Identities = 98/201 (48%), Positives = 147/201 (73%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE     PNVITYTS+IQ+ C+ G++ +AL VL+RM    C PNRVT+S +++ LCA
Sbjct: 259 EMEKEGDGCSPNVITYTSVIQSFCEKGQTTKALRVLDRMGTCGCAPNRVTVSTLIKRLCA 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG++++A+KL++ VV GG VS  +CYS LV+SL R K  +EA+KLFR ML +  +PD +A
Sbjct: 319 EGHVEEAYKLIDKVVPGGGVSDGDCYSSLVVSLIRIKRLDEAEKLFRKMLATGAKPDSIA 378

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS+++ ++C + R +D F LYE++++  ++ +ID++I S LL+GLC Q+H +E   LA S
Sbjct: 379 CSIMIREICQEGRVLDGFYLYEEIERMRYLSSIDADIYSILLVGLCRQSHSVEAAKLARS 438

Query: 543 MVEEGIHINASYIDDIHKHLK 605
           M+E+ I + A Y+D I +HLK
Sbjct: 439 MLEKRIRLKAPYVDKIIEHLK 459



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P++ITY ++I+  C  G+  +A  + + M    C PN V  S ++EG+C  G ++KA +L
Sbjct: 197 PDMITYLAMIKGFCNAGRLEDACGLFQVMREHGCFPNAVAYSALLEGICRYGSVEKALEL 256

Query: 213 VNDVVAGGHVSSSE--CYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++   G   S     Y+ ++ S        +A ++   M      P+ +  S L+  +
Sbjct: 257 LGEMEKEGDGCSPNVITYTSVIQSFCEKGQTTKALRVLDRMGTCGCAPNRVTVSTLIKRL 316

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
           C +    +A+ L + +   G V   D +  S+L++ L       E E L   M+  G
Sbjct: 317 CAEGHVEEAYKLIDKVVPGGGV--SDGDCYSSLVVSLIRIKRLDEAEKLFRKMLATG 371



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
 Frame = +3

Query: 57  IIQNLCKNGKSV-EALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKLVNDVVAG 233
           ++ NLC+  +   EAL VL +M   N  P+  T +VV+  +C +G +D A KL+ D+   
Sbjct: 134 VVLNLCREARITDEALLVLRKMPEFNLRPDTTTYNVVIRLICEKGDMDMADKLMKDM--- 190

Query: 234 GHVSSSECYSCLVISLFRTKGF------EEAQKLFRWMLDSSVRPDGLACSMLMNDMCLK 395
                 + Y  ++  L   KGF      E+A  LF+ M +    P+ +A S L+  +C  
Sbjct: 191 ---GLIDLYPDMITYLAMIKGFCNAGRLEDACGLFQVMREHGCFPNAVAYSALLEGICRY 247

Query: 396 KRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEGIHINAS 575
                A  L  +++K+G   + +    ++++   CE+    +   + + M   G   N  
Sbjct: 248 GSVEKALELLGEMEKEGDGCSPNVITYTSVIQSFCEKGQTTKALRVLDRMGTCGCAPNRV 307

Query: 576 YIDDIHKHL 602
            +  + K L
Sbjct: 308 TVSTLIKRL 316


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  212 bits (539), Expect = 8e-53
 Identities = 94/200 (47%), Positives = 149/200 (74%)
 Frame = +3

Query: 6   MEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAE 185
           MEKE G+  PNV+TYTS+IQ LC+ G++++A +VL+RME   C PNRVT+S +++ LC +
Sbjct: 259 MEKEGGDCNPNVLTYTSVIQGLCEKGRTMDAFAVLDRMEACGCAPNRVTVSTLLKRLCMD 318

Query: 186 GYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLAC 365
           G++++A+KL++ VVAGG VSS +CYS +V+ L R K  EEA+KLFR  + S V+PDGLAC
Sbjct: 319 GHLEEAYKLIDRVVAGGSVSSCDCYSPIVVCLIRIKKVEEAEKLFRRAVVSGVKPDGLAC 378

Query: 366 SMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSM 545
           S+++ ++C   R +D + L+++++K G + TIDS+  S LL+GLC+Q + +E   LA S+
Sbjct: 379 SLMIKELCFVNRVLDGYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSL 438

Query: 546 VEEGIHINASYIDDIHKHLK 605
           +E+ IH+   Y+D + +++K
Sbjct: 439 IEKRIHLKHPYVDKVVEYMK 458



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
 Frame = +3

Query: 9   EKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEG 188
           E    +  P+++TY SII+  C  G+  EA  +++ M    C PN V  S +V+G+C  G
Sbjct: 188 EMSFNDLYPDMVTYVSIIKGFCDIGRLEEACRLVKEMRAHGCVPNVVVYSTLVDGICRFG 247

Query: 189 YIDKAFKLVNDVVAGGHVSSSE--CYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
            +++A +L+  +   G   +     Y+ ++  L       +A  +   M      P+ + 
Sbjct: 248 SVERALELLGGMEKEGGDCNPNVLTYTSVIQGLCEKGRTMDAFAVLDRMEACGCAPNRVT 307

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
            S L+  +C+     +A+ L + +   G V + D    S +++ L       E E L   
Sbjct: 308 VSTLLKRLCMDGHLEEAYKLIDRVVAGGSVSSCD--CYSPIVVCLIRIKKVEEAEKLFRR 365

Query: 543 MVEEGI 560
            V  G+
Sbjct: 366 AVVSGV 371


>gb|EMJ13638.1| hypothetical protein PRUPE_ppa016777mg, partial [Prunus persica]
          Length = 394

 Score =  204 bits (520), Expect = 1e-50
 Identities = 97/203 (47%), Positives = 144/203 (70%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYTS+IQ LC  G+S EAL +L+RME   C P+RVT+S++++  C 
Sbjct: 184 EMEKEGGDCSPNVVTYTSVIQKLCDKGRSKEALVILDRMEACGCAPSRVTVSILIKSFCV 243

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           E  +++A+KL++ VV G  V+ S+CYS LV+SL R +  EEA+K+ R MLDS ++P+ LA
Sbjct: 244 EDQVEEAYKLIDRVVVGRSVTYSDCYSSLVVSLARGRKPEEAEKVLRMMLDSGLKPNSLA 303

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS+++  +CL+ R +D F L+++L+K   + +IDS+  S LL+GLCEQ H +E   LA  
Sbjct: 304 CSIMLKKVCLEGRVIDGFCLFDELEKMECLSSIDSDTYSILLVGLCEQRHLLEAAKLARL 363

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           M+ +GI + A Y+D I + LK S
Sbjct: 364 MLNKGIKLKAPYVDSIAEILKKS 386



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P++ITY  +I   CK G+  +A  + + M+G  C PN V  S +++G C    +++A +L
Sbjct: 122 PDLITYVVMINGFCKVGRLDDACGLFKVMKGHGCLPNAVVYSALLDGFCRSENMERALEL 181

Query: 213 VNDV-VAGGHVSSSECYSCLVISLFRTKG-FEEAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++   GG  S +      VI     KG  +EA  +   M      P  +  S+L+   
Sbjct: 182 LTEMEKEGGDCSPNVVTYTSVIQKLCDKGRSKEALVILDRMEACGCAPSRVTVSILIKSF 241

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEGIHI 566
           C++ +  +A+ L  D    G  VT  S+  S+L++ L       E E +   M++ G+  
Sbjct: 242 CVEDQVEEAYKLI-DRVVVGRSVTY-SDCYSSLVVSLARGRKPEEAEKVLRMMLDSGLKP 299

Query: 567 NA 572
           N+
Sbjct: 300 NS 301


>gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463014|gb|ACP39959.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 288

 Score =  203 bits (516), Expect = 4e-50
 Identities = 94/203 (46%), Positives = 143/203 (70%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK  G   PNVITYTS+I++ C+ G+++EAL +L+RME   C PNR+T+  ++ GLC 
Sbjct: 73  EMEKAGGNCSPNVITYTSMIKSFCEKGQTIEALRILDRMEACQCVPNRITVITLITGLCT 132

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           +G++++A+KL+ D VAG  VS+S+CYS LV++L R     EA+KLFR ML S  +P G+A
Sbjct: 133 KGHVEEAYKLI-DRVAGRGVSNSDCYSSLVLALIRINRLNEAEKLFRKMLVSGAKPSGIA 191

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS ++ ++C + R +D F LY ++++  ++ +ID++I S LL+GLC Q+H +E   LA  
Sbjct: 192 CSTMIREICHEGRVLDGFCLYNEIERMQYISSIDTDIYSILLVGLCRQSHSVEAVKLARL 251

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           M+   I + A Y+D+I KHLK S
Sbjct: 252 MLRRRIRLEAPYVDEIIKHLKNS 274



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P+++TY ++I+  C  G+  EA  + + M+G    PN VT SV++EG+C     +KA +L
Sbjct: 11  PDMMTYFAMIKGFCNAGRLEEACELFQAMKGQGFSPNAVTYSVLLEGICKYRSTEKALEL 70

Query: 213 VNDV-VAGGHVSSSECYSCLVISLFRTKGFE-EAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++  AGG+ S +      +I  F  KG   EA ++   M      P+ +    L+  +
Sbjct: 71  LGEMEKAGGNCSPNVITYTSMIKSFCEKGQTIEALRILDRMEACQCVPNRITVITLITGL 130

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
           C K    +A+ L + +  +G     +S+  S+L++ L   N   E E L   M+  G
Sbjct: 131 CTKGHVEEAYKLIDRVAGRG---VSNSDCYSSLVLALIRINRLNEAEKLFRKMLVSG 184


>ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
           gi|449505643|ref|XP_004162530.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
          Length = 475

 Score =  200 bits (509), Expect = 2e-49
 Identities = 93/201 (46%), Positives = 143/201 (71%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK+ G   PN +TYTSIIQ+LC+ G  +EAL VL+RME     PNRV +S +V+  C 
Sbjct: 259 EMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEYGYAPNRVAVSFLVKEFCK 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           +G++++A+KL++ VVA G VS  +CYS LV++L + K   EA+KLFR ML + V+PDG+A
Sbjct: 319 DGHVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEAEKLFRNMLANGVKPDGVA 378

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CS+++ ++CL++R +D F L  ++ + G++ +ID++I S LL+GLCE +H ++   LA  
Sbjct: 379 CSLMIRELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLLVGLCEHDHSVDAAKLARL 438

Query: 543 MVEEGIHINASYIDDIHKHLK 605
           M+++GI +   Y + I KHLK
Sbjct: 439 MLKKGIRLKPHYAESIIKHLK 459



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 44/175 (25%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
 Frame = +3

Query: 57  IIQNLCKNGK-SVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKLVNDVVAG 233
           II NLCK  K + EALS+L +M   +   +    ++V+     +G +DKA +L+ +    
Sbjct: 134 IILNLCKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEMDKAMELMKE---- 189

Query: 234 GHVSSSECYSCLVISLFRTKGF------EEAQKLFRWMLDSSVRPDGLACSMLMNDMCLK 395
             + S + +  ++  +   KGF      E+A  LF+ M ++   P+ +  S+L+N   ++
Sbjct: 190 --MDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVLVNG-AIR 246

Query: 396 KRFVD-AFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
            R +D    + ++++K+G   + ++   ++++  LCE+ H +E   + + M E G
Sbjct: 247 LRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEYG 301


>gb|EXC02094.1| hypothetical protein L484_024059 [Morus notabilis]
          Length = 474

 Score =  199 bits (505), Expect = 7e-49
 Identities = 96/203 (47%), Positives = 145/203 (71%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK  GE  PNV+ YTS+IQ  C+ G++ EAL VL+RME   C PNRVT+S ++E  CA
Sbjct: 259 EMEKGGGEVSPNVVAYTSVIQRFCEKGRTSEALEVLDRMEAWGCFPNRVTVSCLIERFCA 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +++  KL++ VV GG VS  EC S  V+SL RT  FEEA+K+FR M+++ ++PD LA
Sbjct: 319 EGRVEEVSKLIDRVVKGG-VSYDECCSSFVVSLKRTGQFEEAEKVFRKMINNGLKPDSLA 377

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           C++++ ++CL  R +D + L ++++K GF  +IDS++ S L++GLC+Q H +E  NL + 
Sbjct: 378 CTIVIKELCLIGRVLDGYQLCDEIEKIGFWSSIDSDVYSLLIVGLCQQGHLVEAANLVSL 437

Query: 543 MVEEGIHINASYIDDIHKHLKGS 611
           M+++GI ++A Y+D I + LK S
Sbjct: 438 MLKKGIQLSAPYVDRIVEILKKS 460


>ref|XP_002326464.1| predicted protein [Populus trichocarpa]
           gi|566149164|ref|XP_006368989.1| hypothetical protein
           POPTR_0001s15470g [Populus trichocarpa]
           gi|550347348|gb|ERP65558.1| hypothetical protein
           POPTR_0001s15470g [Populus trichocarpa]
          Length = 476

 Score =  196 bits (498), Expect = 5e-48
 Identities = 95/201 (47%), Positives = 134/201 (66%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK+     PNVITYTS+IQ+ C+ G++ +ALSVLE ME   C PNRVT S  + G+C 
Sbjct: 260 EMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWINGICT 319

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
            G +   +  +  +VAGG VS  +CYS LV+ L + K  EEA+K FR  L S ++PD LA
Sbjct: 320 NGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRALSSGMKPDSLA 379

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           CSM++ ++C +KR +D F LYE+++K G + +ID +I S LL GLC+Q H  E   LA S
Sbjct: 380 CSMMIREICSEKRVLDGFCLYEEVEKTGCLSSIDIDIYSILLAGLCQQGHSAEAARLARS 439

Query: 543 MVEEGIHINASYIDDIHKHLK 605
           M+E+ I + A +++ I +HLK
Sbjct: 440 MLEKRIPLRAPHVEKIVEHLK 460



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P++ITY S+I+  C  G+  EA ++   M    C+PN V  S +++G+C  G +++AF+L
Sbjct: 198 PDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRFGIVERAFEL 257

Query: 213 VNDVVAGGH--VSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDM 386
           + ++   G     +   Y+ ++ S       ++A  +   M      P+ +  S  +N +
Sbjct: 258 LAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWINGI 317

Query: 387 CLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEGI 560
           C   +  D +   E +   G V   D    S+L++ L +     E E      +  G+
Sbjct: 318 CTNGQLQDVYNFIERIVAGGSVSIGD--CYSSLVVCLIKIKKVEEAEKTFRRALSSGM 373



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
 Frame = +3

Query: 57  IIQNLCK-NGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKLVNDVVAG 233
           ++  LCK  G + EAL VL++M   N  P+    +VV+  LC +G +D A KL+      
Sbjct: 135 VVLRLCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIRSLCEKGDVDMAKKLM------ 188

Query: 234 GHVSSSECYSCLVISLFRTKGF------EEAQKLFRWMLDSSVRPDGLACSMLMNDMCLK 395
           G +   + Y  ++  +   KGF      EEA  LF  M      P+ +A S L++ +C  
Sbjct: 189 GEMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRF 248

Query: 396 KRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
                AF L  +++K+G     +    ++++   CEQ    +  ++   M   G
Sbjct: 249 GIVERAFELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRG 302


>ref|XP_004515635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Cicer arietinum]
          Length = 477

 Score =  185 bits (470), Expect = 8e-45
 Identities = 93/194 (47%), Positives = 129/194 (66%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK  G+  PNV+TYTS+IQ  CK GK  EAL +L+RM    C  N VT+  ++E LC 
Sbjct: 260 EMEK-GGDCCPNVVTYTSLIQGFCKRGKWTEALGILDRMRAFGCFANHVTVFTLIESLCI 318

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +++A+KLV+  V    VS  + YS LVISL R K  EEA+KLF+ MLD  ++PD LA
Sbjct: 319 EGRVEEAYKLVDKFVVEHGVSRGDSYSSLVISLIRIKKLEEAEKLFKEMLDGEIKPDTLA 378

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
            S+L+ + CLK R +D F L + ++ KGF+ +IDS+I S LL+GLC +NH +E   LA  
Sbjct: 379 SSLLLKEFCLKDRVLDGFYLLDAIENKGFLSSIDSDIYSILLVGLCRENHLMEATKLATI 438

Query: 543 MVEEGIHINASYID 584
           M+++G+ +   Y D
Sbjct: 439 MLKKGVSLRPPYRD 452



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P++ITY ++I+  C  G+  +A ++L+ M    C PN V +S +++G C  G ++KA +L
Sbjct: 198 PDLITYMTMIEGFCNAGRLEDAYNMLKVMRVHGCSPNLVVLSAILDGFCRCGSMEKALEL 257

Query: 213 VNDVVAGGHVSSS-ECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDMC 389
           ++++  GG    +   Y+ L+    +   + EA  +   M       + +    L+  +C
Sbjct: 258 LDEMEKGGDCCPNVVTYTSLIQGFCKRGKWTEALGILDRMRAFGCFANHVTVFTLIESLC 317

Query: 390 LKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVE 551
           ++ R  +A+ L +    +  V   DS   S+L+I L       E E L   M++
Sbjct: 318 IEGRVEEAYKLVDKFVVEHGVSRGDS--YSSLVISLIRIKKLEEAEKLFKEMLD 369


>ref|XP_004300367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like isoform 1 [Fragaria vesca subsp. vesca]
           gi|470128894|ref|XP_004300368.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 421

 Score =  185 bits (470), Expect = 8e-45
 Identities = 92/200 (46%), Positives = 135/200 (67%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEKE G+  PNV+TYT++IQ LC   +SVEAL VL+RME   C PNRVT+S ++ GL  
Sbjct: 207 EMEKEGGDCGPNVVTYTTVIQCLCNKHRSVEALLVLDRMEARGCLPNRVTVSTLITGLVK 266

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           E  ++ A+KLV+ VV  G V+ ++CYS  V+SL R    EEA+K+ R ML+S V+P+ L 
Sbjct: 267 EDQVEHAYKLVDRVVKSGSVTKTDCYSTFVVSLERVGRPEEAEKVLRMMLNSGVKPNSLV 326

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
           C++++   CL+ R VDA+ L+ +L+K   + +I+S+  S LL+GLC+Q H +E   LA  
Sbjct: 327 CTIMLKKCCLEGRMVDAYCLFGELEKMECLSSIESDTYSILLLGLCQQRHLVEAAELARV 386

Query: 543 MVEEGIHINASYIDDIHKHL 602
           M+ +GI +   Y+D I + L
Sbjct: 387 MLSKGIKLKGPYVDIISEVL 406


>gb|ESW03282.1| hypothetical protein PHAVU_011G001300g [Phaseolus vulgaris]
          Length = 474

 Score =  179 bits (453), Expect = 7e-43
 Identities = 90/194 (46%), Positives = 127/194 (65%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK  G+  PNV+TYTS+IQ+ CK G+ VEAL +L+RM+   CH N VT+  +V+ LC 
Sbjct: 257 EMEK-GGDCSPNVVTYTSVIQSFCKRGQWVEALDILDRMKALGCHANHVTVFTLVDRLCV 315

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG + +A+KL++  V    VS   C S LVISL R K  +EA+KLF  ML   VRPD LA
Sbjct: 316 EGRVGEAYKLIDKFVVEHGVSYGNCCSSLVISLIRIKKLDEAEKLFMEMLSGDVRPDSLA 375

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
            S+L+ ++C+K + +D F L E ++ KG + TID+ I S LL+GLC++NH  E   LA  
Sbjct: 376 SSLLLKELCMKDQVLDGFHLLEAMENKGCLSTIDNGIYSILLVGLCQRNHLTEATKLAKI 435

Query: 543 MVEEGIHINASYID 584
           M+++ + +   Y D
Sbjct: 436 MLKKSVPLQPPYKD 449



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
 Frame = +3

Query: 9   EKEDGEFK-----PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEG 173
           EK  GE       P++ITY +I++  C  G+   A SVL+ M    C PN V +S +++G
Sbjct: 182 EKLTGEMSLNGLYPDLITYMAIVEGFCNAGRPEHAYSVLKVMRVHKCSPNLVLLSAILDG 241

Query: 174 LCAEGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKG-FEEAQKLFRWMLDSSVRP 350
           LC  G ++ A +L++++  GG  S +      VI  F  +G + EA  +   M       
Sbjct: 242 LCRSGSMEMALELLDEMEKGGDCSPNVVTYTSVIQSFCKRGQWVEALDILDRMKALGCHA 301

Query: 351 DGLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVV---TIDSNIISALLIGLCE------ 503
           + +    L++ +C++ R  +A+ L +      FVV       N  S+L+I L        
Sbjct: 302 NHVTVFTLVDRLCVEGRVGEAYKLIDK-----FVVEHGVSYGNCCSSLVISLIRIKKLDE 356

Query: 504 --------QNHDIEVENLANSMVEEGIHINASYIDDIH 593
                    + D+  ++LA+S++ + + +    +D  H
Sbjct: 357 AEKLFMEMLSGDVRPDSLASSLLLKELCMKDQVLDGFH 394


>ref|NP_199547.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180684|sp|Q9LVS3.1|PP422_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g47360 gi|8809619|dbj|BAA97170.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332008119|gb|AED95502.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score =  174 bits (440), Expect = 2e-41
 Identities = 92/204 (45%), Positives = 133/204 (65%), Gaps = 3/204 (1%)
 Frame = +3

Query: 3   EMEKEDGE--FKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGL 176
           EMEKEDG     PN +TYT +IQ  C+  +  EAL VL+RM    C PNRVT  V+++G+
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319

Query: 177 CAEGYIDKAF-KLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPD 353
                  KA  KL++ +V  G VS SEC+S   +SL R K +EEA+K+FR ML   VRPD
Sbjct: 320 LENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379

Query: 354 GLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENL 533
           GLACS +  ++CL +R++D F LY++++KK    TIDS+I + LL+GLC+Q +  E   L
Sbjct: 380 GLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKL 439

Query: 534 ANSMVEEGIHINASYIDDIHKHLK 605
           A SM+++ + +  S+++ I + LK
Sbjct: 440 AKSMLDKKMRLKVSHVEKIIEALK 463



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P+VITYTS+I   C  GK  +A  + + M   +C  N VT S ++EG+C  G +++A +L
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257

Query: 213 VNDVV---AGGHVSSSECYSCLVISLF-RTKGFEEAQKLFRWMLDSSVRPDGLACSMLMN 380
           + ++     GG +S +     LVI  F   +  EEA  +   M +    P+ +   +L+ 
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317

Query: 381 DMCLKKRFVDAFT-LYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
            +      V A + L + L K G V    S   S+  + L       E E +   M+  G
Sbjct: 318 GVLENDEDVKALSKLIDKLVKLGGVSL--SECFSSATVSLIRMKRWEEAEKIFRLMLVRG 375

Query: 558 I 560
           +
Sbjct: 376 V 376


>ref|XP_002863348.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309183|gb|EFH39607.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 477

 Score =  172 bits (435), Expect = 9e-41
 Identities = 87/204 (42%), Positives = 134/204 (65%), Gaps = 3/204 (1%)
 Frame = +3

Query: 3   EMEKEDGE--FKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGL 176
           EMEKEDG     PN +TYT +IQ+ C+  +  EAL VL+RM    C PNRVT SV+++G+
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQSFCEKKRIREALLVLDRMGDRGCTPNRVTASVLIQGV 319

Query: 177 CAEGY-IDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPD 353
                 +    KL++ +V  G VS SEC+S   +SL R K +EEA+K+FR ML   +RPD
Sbjct: 320 LENDEDVKDLSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGIRPD 379

Query: 354 GLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENL 533
           GLAC+ +  ++CL +R++D F LY++++K+    T+DS+I + LL+GLC+Q +  E   L
Sbjct: 380 GLACTHVFRELCLSERYLDCFVLYQEIEKEDVKSTMDSDIYAVLLLGLCQQGNSWEAAKL 439

Query: 534 ANSMVEEGIHINASYIDDIHKHLK 605
           A SM+++ + +  S+++ I + LK
Sbjct: 440 AKSMLDKKMRLKVSHVEKIIEALK 463



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P+VITYT++I   C  GK  EA  + + M   +C  N VT S ++EG+C  G ++ A +L
Sbjct: 198 PDVITYTAMINGYCNAGKIDEAWKLAKEMSKHDCVLNTVTYSRILEGVCKSGDMETALEL 257

Query: 213 VNDVV---AGGHVS-SSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMN 380
           + ++     GG +S ++  Y+ ++ S    K   EA  +   M D    P+ +  S+L+ 
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQSFCEKKRIREALLVLDRMGDRGCTPNRVTASVLIQ 317

Query: 381 DMCLKKRFV-DAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
            +      V D   L + L K G V    S   S+  + L       E E +   M+  G
Sbjct: 318 GVLENDEDVKDLSKLIDKLVKLGGVSL--SECFSSATVSLIRMKRWEEAEKIFRLMLVRG 375

Query: 558 I 560
           I
Sbjct: 376 I 376


>ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505957|gb|AES87099.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 449

 Score =  172 bits (435), Expect = 9e-41
 Identities = 86/194 (44%), Positives = 128/194 (65%)
 Frame = +3

Query: 3   EMEKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCA 182
           EMEK  G+  PNV+TYTS+IQ+ CK G+  EAL++L+RM    C  N VT+  ++E LC 
Sbjct: 235 EMEKS-GDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCT 293

Query: 183 EGYIDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLA 362
           EG +D+A+K+V+ +V    VS  +CY+ LVIS  R K  E A+ LF+ ML + ++PD LA
Sbjct: 294 EGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLAAEIKPDTLA 353

Query: 363 CSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANS 542
            S+L+ ++CLK R +D F L + ++  GF+ +IDS+I S +LIGL ++NH  E   LA  
Sbjct: 354 SSLLLKELCLKDRVLDGFYLLDTIENMGFLSSIDSDIYSIMLIGLWQKNHLTEATKLAKI 413

Query: 543 MVEEGIHINASYID 584
           M+++ I +   Y D
Sbjct: 414 MLKKAIPLRPPYKD 427



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P++ITY ++I+ LC  G+  EA  +++ M G+ C PN V +S V++GLC    +++A +L
Sbjct: 173 PDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALEL 232

Query: 213 VNDVVAGGHVSSS-ECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPDGLACSMLMNDMC 389
           ++++   G    +   Y+ L+ S  +   + EA  +   M       + +    L+  +C
Sbjct: 233 LDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLC 292

Query: 390 LKKRFVDAFTLYEDL 434
            + R  +A+ + + L
Sbjct: 293 TEGRVDEAYKVVDKL 307



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
 Frame = +3

Query: 15  EDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYI 194
           ED E KP+ + Y  +I+ +CK G       +++ M  +   P+ +T   ++EGLC+ G +
Sbjct: 132 EDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRL 191

Query: 195 DKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDS-SVRPDGLACSM 371
           ++A+++V  +   G   +S   S ++  L R    E A +L   M  S    P+ +  + 
Sbjct: 192 EEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTYTS 251

Query: 372 LMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVE 551
           L+   C +  + +A  + +  + + F    +   +  L+  LC +    E   + + +V 
Sbjct: 252 LIQSFCKRGEWTEALNILD--RMRAFGCFANHVTVFTLIESLCTEGRVDEAYKVVDKLVV 309

Query: 552 E 554
           E
Sbjct: 310 E 310


>ref|XP_006282107.1| hypothetical protein CARUB_v10028355mg, partial [Capsella rubella]
           gi|482550811|gb|EOA15005.1| hypothetical protein
           CARUB_v10028355mg, partial [Capsella rubella]
          Length = 493

 Score =  171 bits (432), Expect = 2e-40
 Identities = 88/204 (43%), Positives = 132/204 (64%), Gaps = 3/204 (1%)
 Frame = +3

Query: 3   EMEKED--GEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGL 176
           EMEKED  G   PN +TYT +IQ  C+  +  EAL VL+RM    C PNRVT SV+++G+
Sbjct: 276 EMEKEDVGGSISPNAVTYTLVIQAFCEKKRISEALLVLDRMGDRGCTPNRVTASVLIQGV 335

Query: 177 CAEGY-IDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPD 353
                 +    K+++ +V  G VS SEC+S   +SL R K +EEA K+FR ML   +RPD
Sbjct: 336 LENNEDVKDLTKVIDKLVKLGGVSLSECFSSATVSLIRMKRWEEADKIFRLMLVRGIRPD 395

Query: 354 GLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENL 533
           GLACS+++ ++CL +R++D F LY++++K     TIDS+I + LL+GLC+Q    E   L
Sbjct: 396 GLACSLVLRELCLLERYLDCFLLYQEIEKADVKSTIDSDIHAILLLGLCKQGSSWEAAKL 455

Query: 534 ANSMVEEGIHINASYIDDIHKHLK 605
           A SM+++ + +  S+++ I + LK
Sbjct: 456 AKSMLDKKMRLKVSHVEKIIEALK 479



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P+VITYTS+I   C  GK  EA  + + M   +C  N V  S ++EG+C  G ++ A +L
Sbjct: 214 PDVITYTSVINGSCNAGKIDEAWKLAKEMSKHDCVLNTVAYSRILEGVCKSGSMEAALEL 273

Query: 213 VNDVV---AGGHVSSSECYSCLVISLF-RTKGFEEAQKLFRWMLDSSVRPDGLACSMLMN 380
           + ++     GG +S +     LVI  F   K   EA  +   M D    P+ +  S+L+ 
Sbjct: 274 LAEMEKEDVGGSISPNAVTYTLVIQAFCEKKRISEALLVLDRMGDRGCTPNRVTASVLIQ 333

Query: 381 DMCLKKRFV-DAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEEG 557
            +      V D   + + L K G V    S   S+  + L       E + +   M+  G
Sbjct: 334 GVLENNEDVKDLTKVIDKLVKLGGVSL--SECFSSATVSLIRMKRWEEADKIFRLMLVRG 391

Query: 558 I 560
           I
Sbjct: 392 I 392


>ref|XP_006398426.1| hypothetical protein EUTSA_v10000870mg [Eutrema salsugineum]
           gi|557099515|gb|ESQ39879.1| hypothetical protein
           EUTSA_v10000870mg [Eutrema salsugineum]
          Length = 478

 Score =  169 bits (428), Expect = 6e-40
 Identities = 91/205 (44%), Positives = 130/205 (63%), Gaps = 4/205 (1%)
 Frame = +3

Query: 3   EMEKEDGE--FKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGL 176
           EMEKEDG     PN +TYT +IQ  C+  +  EAL +L+RM    C PNRVT SV+++G+
Sbjct: 260 EMEKEDGGGFISPNAVTYTLVIQAFCEKKRVQEALMILDRMGDRGCLPNRVTASVLIQGV 319

Query: 177 CAEGYID--KAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRP 350
             E   D     KL++ +V  G VS SEC+S   +SL R K +EEA+K+FR ML    RP
Sbjct: 320 VEENDEDVMDLSKLIDKLVKLGGVSLSECFSSATVSLIRLKKWEEAEKIFRLMLVQGNRP 379

Query: 351 DGLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVEN 530
           DGLACS+++ ++C  +R+ D F LYE+++K   + TIDS+I S LL+GLCE     E   
Sbjct: 380 DGLACSLVLRELCSLERYQDCFFLYEEIEKANVISTIDSDIHSVLLLGLCEHGCSWEATK 439

Query: 531 LANSMVEEGIHINASYIDDIHKHLK 605
           LA  M+++ + +N S++  I + LK
Sbjct: 440 LAKWMLDKKMRLNVSHVKRIIQALK 464



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
 Frame = +3

Query: 33  PNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEGYIDKAFKL 212
           P+V+TYTS+I   C  GK  EA ++ + M    C  N VT S ++EG+C  G +++A + 
Sbjct: 198 PDVMTYTSVINGFCNAGKIDEAWNLSKAMSKHGCVLNTVTFSRILEGVCKSGDMERALEF 257

Query: 213 VNDVV---AGGHVSSSECYSCLVISLF-RTKGFEEAQKLFRWMLDSSVRPDGLACSMLMN 380
           + ++     GG +S +     LVI  F   K  +EA  +   M D    P+ +  S+L+ 
Sbjct: 258 LGEMEKEDGGGFISPNAVTYTLVIQAFCEKKRVQEALMILDRMGDRGCLPNRVTASVLIQ 317

Query: 381 DMCLK--KRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENLANSMVEE 554
            +  +  +  +D   L + L K G V    S   S+  + L       E E +   M+ +
Sbjct: 318 GVVEENDEDVMDLSKLIDKLVKLGGVSL--SECFSSATVSLIRLKKWEEAEKIFRLMLVQ 375

Query: 555 G 557
           G
Sbjct: 376 G 376


>gb|ABD64962.1| PPR repeat containing protein [Brassica oleracea]
          Length = 345

 Score =  167 bits (423), Expect = 2e-39
 Identities = 89/204 (43%), Positives = 131/204 (64%), Gaps = 3/204 (1%)
 Frame = +3

Query: 3   EMEKED--GEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGL 176
           EMEKE+  G   PN +TYT +IQ   +  +  EAL VL+RM    C PNRVT SV+++G+
Sbjct: 128 EMEKEEDGGFISPNAVTYTLVIQAFVEKKRVQEALMVLDRMGDRGCSPNRVTASVLIQGV 187

Query: 177 CAEGY-IDKAFKLVNDVVAGGHVSSSECYSCLVISLFRTKGFEEAQKLFRWMLDSSVRPD 353
              G  +    KL++ +V  G VS SE +S   +SL R K +EEA+K+FR ML   +RPD
Sbjct: 188 LENGEDVKDLSKLIDKLVKLGGVSLSEFFSSATVSLIRLKRWEEAEKMFRLMLVRGIRPD 247

Query: 354 GLACSMLMNDMCLKKRFVDAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENL 533
           GLACS+++ ++CL +R+ D F LYE+++K   V TID+++ S LL+GLCEQ    E   L
Sbjct: 248 GLACSLVLRELCLLERYHDCFLLYEEIEKVDVVSTIDTDVHSVLLLGLCEQGRSWEAAKL 307

Query: 534 ANSMVEEGIHINASYIDDIHKHLK 605
           A SM+++ + +  S ++ I + LK
Sbjct: 308 AKSMLDKKMRLKVSQVEKIIQALK 331



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
 Frame = +3

Query: 9   EKEDGEFKPNVITYTSIIQNLCKNGKSVEALSVLERMEGSNCHPNRVTMSVVVEGLCAEG 188
           E E  +  P+V+TYTS+I   C  GK  EA  + + M    C  N VT S ++EG+C  G
Sbjct: 58  EMESIDLSPDVMTYTSLINGFCNAGKVDEAWKLAKGMSEHGCVLNTVTYSRILEGVCKCG 117

Query: 189 YIDKAFKLVNDVVA---GGHVSSSECYSCLVISLF-RTKGFEEAQKLFRWMLDSSVRPDG 356
            +++A +L+ ++     GG +S +     LVI  F   K  +EA  +   M D    P+ 
Sbjct: 118 EMERALELLTEMEKEEDGGFISPNAVTYTLVIQAFVEKKRVQEALMVLDRMGDRGCSPNR 177

Query: 357 LACSMLMNDMCLKKRFV-DAFTLYEDLKKKGFVVTIDSNIISALLIGLCEQNHDIEVENL 533
           +  S+L+  +      V D   L + L K G V    S   S+  + L       E E +
Sbjct: 178 VTASVLIQGVLENGEDVKDLSKLIDKLVKLGGVSL--SEFFSSATVSLIRLKRWEEAEKM 235

Query: 534 ANSMVEEGI 560
              M+  GI
Sbjct: 236 FRLMLVRGI 244