BLASTX nr result

ID: Achyranthes23_contig00039051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00039051
         (539 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004288292.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...    61   1e-07
ref|XP_004288291.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...    61   1e-07
ref|XP_005783774.1| hypothetical protein EMIHUDRAFT_78158 [Emili...    57   2e-06
ref|XP_005713198.1| unnamed protein product [Chondrus crispus] g...    55   8e-06

>ref|XP_004288292.1| PREDICTED: ubiquitin-conjugating enzyme E2 2-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 144

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 43/113 (38%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -2

Query: 538 SASPLSDENLFVWSATIFGPDETPSEGTSFAFFMYIFVAVGFWTPDLGLTLAAL*SFNFG 359
           SASP+SD+NLFVWSATIFGPDETP E                                  
Sbjct: 26  SASPMSDDNLFVWSATIFGPDETPWE---------------------------------- 51

Query: 358 YGLIYYVGGVSSLRLTFTD-YS*KPPRARFIDNCMPFPSMNISFLCFTFV*DA 203
                  GGV SLRLTF++ Y  KPPR RF          +   LC   + DA
Sbjct: 52  -------GGVFSLRLTFSERYPEKPPRVRFTSEMFHPNVYHDGALCMDIIQDA 97


>ref|XP_004288291.1| PREDICTED: ubiquitin-conjugating enzyme E2 2-like isoform 1
           [Fragaria vesca subsp. vesca]
          Length = 153

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 43/113 (38%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -2

Query: 538 SASPLSDENLFVWSATIFGPDETPSEGTSFAFFMYIFVAVGFWTPDLGLTLAAL*SFNFG 359
           SASP+SD+NLFVWSATIFGPDETP E                                  
Sbjct: 26  SASPMSDDNLFVWSATIFGPDETPWE---------------------------------- 51

Query: 358 YGLIYYVGGVSSLRLTFTD-YS*KPPRARFIDNCMPFPSMNISFLCFTFV*DA 203
                  GGV SLRLTF++ Y  KPPR RF          +   LC   + DA
Sbjct: 52  -------GGVFSLRLTFSERYPEKPPRVRFTSEMFHPNVYHDGALCMDIIQDA 97


>ref|XP_005783774.1| hypothetical protein EMIHUDRAFT_78158 [Emiliania huxleyi CCMP1516]
           gi|485636785|gb|EOD31345.1| hypothetical protein
           EMIHUDRAFT_78158 [Emiliania huxleyi CCMP1516]
          Length = 152

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/90 (40%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = -2

Query: 538 SASPLSDENLFVWSATIFGPDETPSEGTSFAFFMYIFVAVGFWTPDLGLTLAAL*SFNFG 359
           SASPLSDENLFVW  T+FGPD+TP E                                  
Sbjct: 26  SASPLSDENLFVWGGTVFGPDDTPWE---------------------------------- 51

Query: 358 YGLIYYVGGVSSLRLTFTD-YS*KPPRARF 272
                  GG+ S+RLTFT+ Y  KPPR RF
Sbjct: 52  -------GGIFSMRLTFTEQYPDKPPRVRF 74


>ref|XP_005713198.1| unnamed protein product [Chondrus crispus]
           gi|507109580|emb|CDF33395.1| unnamed protein product
           [Chondrus crispus]
          Length = 137

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/90 (42%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = -2

Query: 538 SASPLSDENLFVWSATIFGPDETPSEGTSFAFFMYIFVAVGFWTPDLGLTLAAL*SFNFG 359
           SASPLS+ENLFVW ATIFGP ETP E                                  
Sbjct: 10  SASPLSEENLFVWGATIFGPPETPWE---------------------------------- 35

Query: 358 YGLIYYVGGVSSLRLTFTD-YS*KPPRARF 272
                  GGV SLRLTF + Y  KPPR RF
Sbjct: 36  -------GGVYSLRLTFNEQYPEKPPRVRF 58


Top