BLASTX nr result
ID: Achyranthes23_contig00038827
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes23_contig00038827
(544 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 280 1e-73
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 246 3e-63
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 246 3e-63
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 244 1e-62
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 242 5e-62
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 241 6e-62
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 237 2e-60
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 237 2e-60
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 236 2e-60
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 235 4e-60
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 235 4e-60
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa... 235 6e-60
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 234 1e-59
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 233 2e-59
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 229 4e-58
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 225 5e-57
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 225 5e-57
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 220 1e-55
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 219 4e-55
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 218 6e-55
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 280 bits (717), Expect = 1e-73
Identities = 139/191 (72%), Positives = 164/191 (85%), Gaps = 10/191 (5%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
L+ADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSH+GNLNLQL+TDSLLSLK +F++
Sbjct: 237 LAADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHSGNLNLQLSTDSLLSLKTMFEV 296
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKAC----------SSGSCWTAEQILQTALPPDFEC 331
YFLD+ASA QLAM++S+ LP PAL KAC SSG WTA+Q+LQTALP FEC
Sbjct: 297 YFLDRASANQLAMYASSLLPSPALWKACSSNAKKKKAHSSGPRWTAQQVLQTALPSHFEC 356
Query: 332 QGDKLIIRCGEVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSE 511
GD+L+I E++KLD+NRD++AS++SD+L ++FFNKSPKDALD FDSLQPLLMENLFSE
Sbjct: 357 HGDRLLIHDSEILKLDFNRDIVASVISDVLTSLFFNKSPKDALDFFDSLQPLLMENLFSE 416
Query: 512 GFSVGLDDFFY 544
GFSV L DFF+
Sbjct: 417 GFSVSLHDFFF 427
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 246 bits (628), Expect = 3e-63
Identities = 124/179 (69%), Positives = 146/179 (81%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSL A+AEVLELFSVEKQLLSSH+GNLNLQL TDSLLSLK LF+
Sbjct: 506 LSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFER 565
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFL+KA+AQQL M S LP PALLK+ SG CWTA QILQTALP F+C G++ I
Sbjct: 566 YFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKS 625
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
++K+DYNRDV+ S++++I+ ++F K P + L FDSLQPLLMENLFSEGFSV L+DF
Sbjct: 626 AILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDF 684
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 246 bits (628), Expect = 3e-63
Identities = 124/179 (69%), Positives = 146/179 (81%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSL A+AEVLELFSVEKQLLSSH+GNLNLQL TDSLLSLK LF+
Sbjct: 446 LSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFER 505
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFL+KA+AQQL M S LP PALLK+ SG CWTA QILQTALP F+C G++ I
Sbjct: 506 YFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKS 565
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
++K+DYNRDV+ S++++I+ ++F K P + L FDSLQPLLMENLFSEGFSV L+DF
Sbjct: 566 AILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDF 624
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 244 bits (623), Expect = 1e-62
Identities = 120/180 (66%), Positives = 147/180 (81%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEVLELFSVEKQLLSSH+G NLQL D+LLSLK +FK
Sbjct: 449 LSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGKPNLQLAADALLSLKMMFKK 508
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFLDKA+AQQLAM +S+ LP PALLKA S+ S WTA QILQTALP F+C GD ++
Sbjct: 509 YFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFDCSGDNYLVNKS 568
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDFF 541
E++ +D++ +A++M+DI ++FF K +D L FDSLQPLLMENLFSEGFSVGL+DF+
Sbjct: 569 EILNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFSEGFSVGLEDFY 628
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 242 bits (617), Expect = 5e-62
Identities = 119/179 (66%), Positives = 148/179 (82%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEVLELFSVEKQLLSSHNGNLNLQL TD+LLSLK +FK
Sbjct: 448 LSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKK 507
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFLDKA AQQLAM + + LP PAL KA SG WTA QILQ+ LPP F+ GD+ +I+
Sbjct: 508 YFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTALQILQSVLPPGFDSCGDRYLIKKS 567
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
EV+ D++RD + S++++I+ ++FF K P++ L+ FDSLQPLLMENLF++GFSV L+DF
Sbjct: 568 EVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSVSLEDF 626
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 241 bits (616), Expect = 6e-62
Identities = 121/181 (66%), Positives = 150/181 (82%), Gaps = 1/181 (0%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEVLELFSVEKQLLSSH+GNLNLQLT+DSLLSLK +F
Sbjct: 448 LSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTSDSLLSLKTMFNT 507
Query: 182 YFLDKASAQQLAMH-SSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRC 358
YFLD+A+AQQLAM SS+ LP PAL KA S WTA QILQTALP F+C G++ +I
Sbjct: 508 YFLDRAAAQQLAMFVSSSSLPQPALWKAHCSVPIWTALQILQTALPSQFDCSGERYLISN 567
Query: 359 GEVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
++VK+D++RDV+ ++++DI+ +MFF K P F+SLQPLLME+LFSEGFSVGL+DF
Sbjct: 568 TDIVKVDFSRDVVQAVINDIVISMFFEKGPDAVFKFFNSLQPLLMESLFSEGFSVGLEDF 627
Query: 539 F 541
+
Sbjct: 628 Y 628
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 237 bits (604), Expect = 2e-60
Identities = 116/179 (64%), Positives = 143/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQS++A+AEVL LFSVEKQLLSSH+GNLNLQL DSLLSLK +F+
Sbjct: 446 LSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRK 505
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFL KA+AQQLAM S++LP PALL S WTA QILQT LP F+C GD +I+
Sbjct: 506 YFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNS 565
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
+K D++RD M S++++IL ++FF K P++ L FDSLQPLLME++FSEGFSVGLDD+
Sbjct: 566 NFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 624
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 237 bits (604), Expect = 2e-60
Identities = 116/179 (64%), Positives = 143/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQS++A+AEVL LFSVEKQLLSSH+GNLNLQL DSLLSLK +F+
Sbjct: 476 LSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRK 535
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YFL KA+AQQLAM S++LP PALL S WTA QILQT LP F+C GD +I+
Sbjct: 536 YFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNS 595
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
+K D++RD M S++++IL ++FF K P++ L FDSLQPLLME++FSEGFSVGLDD+
Sbjct: 596 NFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 654
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 236 bits (603), Expect = 2e-60
Identities = 119/180 (66%), Positives = 149/180 (82%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEVLELFSVEKQLLSSHNGNLNLQL TD+LLSLK +FK
Sbjct: 448 LSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKK 507
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKA-CSSGSCWTAEQILQTALPPDFECQGDKLIIRC 358
YFLDKA QQLAM + + LP PAL KA CS+ WTA QILQ+ LPP F+ GD+ +I+
Sbjct: 508 YFLDKAFTQQLAMFALSPLPRPALSKARCSAR--WTALQILQSVLPPGFDSCGDRYLIKK 565
Query: 359 GEVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
EV+K D++RD + S++++I+ ++FF K P++ L+ FDSLQPLLMENLF++GFSV L+DF
Sbjct: 566 SEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSVSLEDF 625
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 235 bits (600), Expect = 4e-60
Identities = 112/179 (62%), Positives = 142/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEV ELFSVEKQLLSSHNGNLNLQL TDSLLSL+ + K
Sbjct: 447 LSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKT 506
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
KA AQQL+M S+ LP PA LK S G CWTA QILQTA P +C GD+ +I
Sbjct: 507 LLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKS 566
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
+++ +D++RD+M S++++++ ++FF K PK+ L+ FDSLQPLLMEN+F+EGFSV L+DF
Sbjct: 567 DILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDF 625
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao]
Length = 1788
Score = 235 bits (600), Expect = 4e-60
Identities = 112/179 (62%), Positives = 142/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEV ELFSVEKQLLSSHNGNLNLQL TDSLLSL+ + K
Sbjct: 447 LSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKT 506
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
KA AQQL+M S+ LP PA LK S G CWTA QILQTA P +C GD+ +I
Sbjct: 507 LLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKS 566
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
+++ +D++RD+M S++++++ ++FF K PK+ L+ FDSLQPLLMEN+F+EGFSV L+DF
Sbjct: 567 DILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDF 625
>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed
RNA polymerase alpha subunit family protein [Populus
trichocarpa]
Length = 842
Score = 235 bits (599), Expect = 6e-60
Identities = 121/179 (67%), Positives = 142/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSL+A+AEVLELFSVEKQLLSSH+GNLNLQLTTDSLLSLK +FK
Sbjct: 366 LSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMIFKA 425
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FLDK++AQQLAM S LP PALLK WTA QILQ ALP F C G++ +I
Sbjct: 426 SFLDKSAAQQLAMFVSPDLPQPALLKVNCIRPYWTAHQILQMALPTCFNCSGERFLINNS 485
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
V+K+D+NRDV+AS++++IL ++FF K L F++LQPLLMENLFSEGFSV L DF
Sbjct: 486 NVLKVDFNRDVVASMINEILISIFFEKGSGAVLKFFNALQPLLMENLFSEGFSVSLKDF 544
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 234 bits (596), Expect = 1e-59
Identities = 117/179 (65%), Positives = 145/179 (81%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDC+HLFYPQSL+A+AEV+ELFSVEKQLLSSH+G NLQL TDSLLSLK +FK
Sbjct: 445 LSADFDGDCIHLFYPQSLAAKAEVMELFSVEKQLLSSHSGKPNLQLATDSLLSLKLMFKK 504
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
YF +KA+ QQLAM S+ LP PALLKA S+ CWTA QILQTALP F+ GD+ +++
Sbjct: 505 YFFNKAAMQQLAMFVSSSLPQPALLKANSTVPCWTALQILQTALPAQFQSSGDRHLVKDS 564
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
EV+ LD + ++ S+++DI ++FF KS +D L F+S+QPLLMENLFSEGFSVGL+DF
Sbjct: 565 EVLLLDCSTSLVPSLINDIGTSIFFEKSAEDVLSFFNSMQPLLMENLFSEGFSVGLEDF 623
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 233 bits (595), Expect = 2e-59
Identities = 120/179 (67%), Positives = 142/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSL+A+AEVLELFSVEKQLLSSH+GNLNLQLTTDSLLSLK +FK
Sbjct: 452 LSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKA 511
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FL K++AQQLAM S +LP PALLK WTA QILQ ALP F C G++ +I
Sbjct: 512 CFLGKSAAQQLAMFISPYLPQPALLKVNCFFPHWTAHQILQMALPACFNCSGERFLIINS 571
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
+K+D+NRDV+AS++++IL +MFF K L F+SLQP+LMENLFSEGFSV L+DF
Sbjct: 572 NFLKVDFNRDVVASVINEILISMFFEKGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDF 630
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 229 bits (583), Expect = 4e-58
Identities = 112/179 (62%), Positives = 143/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
L ADFDGDCVHLFYPQSL+A+AEVLELFSVEKQLLSSH+GNLNLQL+TDSLLSLK L K
Sbjct: 450 LGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSTDSLLSLKMLVKS 509
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FLD+A+A Q+AM S LP PAL KA S S WT+ Q+LQ ALP F+C G + +IR
Sbjct: 510 CFLDRAAANQMAMFLSLPLPMPALFKAGSGDSYWTSVQMLQCALPSSFDCTGGRYLIRQR 569
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
E+++ D+ RD++ SI++++ ++FF++ PK+AL+ FD LQP LMEN+F+ G+SVGL DF
Sbjct: 570 EILEFDFTRDLLPSIINEVAASIFFSQGPKEALNFFDVLQPFLMENIFAHGYSVGLQDF 628
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2082
Score = 225 bits (574), Expect = 5e-57
Identities = 111/179 (62%), Positives = 142/179 (79%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
L ADFDGDCVHLFYPQSL+A+AEV+ELFSVE QLLSSH+GNLNLQL+TDSLLSLK L K
Sbjct: 450 LGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKR 509
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
F D+A+A QLAM LP PALLKA S +CWT+ QILQ ALP F+C G + +IR
Sbjct: 510 CFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQILQCALPLGFDCTGGRYLIRQS 569
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
E+++ +++RDV+ + +++I ++FF K PK+AL+ FD LQP LME+LF+EGFSV L++F
Sbjct: 570 EILEFEFSRDVLPATVNEIAASVFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEF 628
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 225 bits (574), Expect = 5e-57
Identities = 111/179 (62%), Positives = 141/179 (78%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
L ADFDGDCVHLFYPQSL+A+AEVLELFSVEKQLLSSH+GNLNLQL+ DSLLSLK L K
Sbjct: 532 LGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSADSLLSLKMLVKS 591
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FLD+ +A Q+AM LP PALLKA + S WT+ QILQ ALP F+C G + +IR
Sbjct: 592 CFLDRVAANQMAMFLLLPLPMPALLKATTGDSYWTSIQILQCALPFSFDCTGGRYLIRQR 651
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
E+++ D+ RD++ SI+++I ++FF+K P++AL+ FD +QP LMEN+F+ GFSVGL DF
Sbjct: 652 EILEFDFTRDILPSIINEIAASIFFSKGPQEALNFFDVIQPFLMENIFAHGFSVGLQDF 710
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 220 bits (561), Expect = 1e-55
Identities = 109/178 (61%), Positives = 138/178 (77%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSLSA+AEV+ELFSV+KQLLSSH G L LQ+ DSLLSL+ + +
Sbjct: 446 LSADFDGDCVHLFYPQSLSAKAEVMELFSVDKQLLSSHTGQLILQMGCDSLLSLRVMLER 505
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FLDKA+AQQLAM+ S LP PAL K+ SG WT QILQ A P C+GD+ ++
Sbjct: 506 VFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVFQILQLAFPERLSCKGDRFMVDGS 565
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDD 535
++++ D+ DVMASI+S+I+ ++F K PK+AL FDSLQPLLME+LF+EGFS+ L+D
Sbjct: 566 DLLRFDFGVDVMASIISEIVTSIFLEKGPKEALGFFDSLQPLLMESLFAEGFSLSLED 623
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2020
Score = 219 bits (557), Expect = 4e-55
Identities = 108/179 (60%), Positives = 139/179 (77%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
L ADFDGDCVHLFYPQSL+A+AEV+ELF+VE QLLSSH+GNLNLQL+TDSLL+LK L K
Sbjct: 450 LGADFDGDCVHLFYPQSLAAKAEVVELFAVENQLLSSHSGNLNLQLSTDSLLALKMLVKR 509
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FL +A+A QLAM LP PALLKA S +CWT+ QILQ ALP F+C G + +IR
Sbjct: 510 CFLGRAAANQLAMFLLLPLPRPALLKASSDDACWTSIQILQGALPMGFDCTGGRYLIRQS 569
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDDF 538
E+++ D++RD + + +++I ++FF K P +AL FD LQP LME+LF+EGFSV L++F
Sbjct: 570 EILEFDFSRDALPATINEIAASIFFGKGPMEALKFFDVLQPFLMESLFAEGFSVSLEEF 628
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata]
gi|297325678|gb|EFH56098.1| NRPD1b [Arabidopsis lyrata
subsp. lyrata]
Length = 1947
Score = 218 bits (556), Expect = 6e-55
Identities = 109/178 (61%), Positives = 136/178 (76%)
Frame = +2
Query: 2 LSADFDGDCVHLFYPQSLSARAEVLELFSVEKQLLSSHNGNLNLQLTTDSLLSLKALFKL 181
LSADFDGDCVHLFYPQSLSA+AEV+ELFSVEKQLLSSH G L LQ+ DSLLSL+ + +
Sbjct: 446 LSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGCDSLLSLRVMLEG 505
Query: 182 YFLDKASAQQLAMHSSTHLPYPALLKACSSGSCWTAEQILQTALPPDFECQGDKLIIRCG 361
FLDKA+AQQLAM+ S LP PAL K+ SG WT QILQ A P C+GD+ ++
Sbjct: 506 VFLDKATAQQLAMYGSLTLPPPALRKSSKSGPAWTVFQILQLAFPERLSCKGDRFMVDGS 565
Query: 362 EVVKLDYNRDVMASIMSDILNTMFFNKSPKDALDIFDSLQPLLMENLFSEGFSVGLDD 535
+++K D+ D MASI+++I+ ++F K PK+ L FDSLQPLLME+LF+EGFSV L+D
Sbjct: 566 DLLKFDFGVDAMASIINEIVTSIFLEKGPKETLGFFDSLQPLLMESLFAEGFSVSLED 623