BLASTX nr result

ID: Achyranthes23_contig00038358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00038358
         (246 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...    65   9e-09
ref|XP_006453301.1| hypothetical protein CICLE_v10007330mg [Citr...    60   4e-07
ref|XP_006453300.1| hypothetical protein CICLE_v10007330mg [Citr...    60   4e-07
ref|XP_002329673.1| predicted protein [Populus trichocarpa] gi|5...    59   9e-07

>ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
           gi|296089553|emb|CBI39372.3| unnamed protein product
           [Vitis vinifera]
          Length = 1017

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/78 (47%), Positives = 48/78 (61%)
 Frame = -2

Query: 239 QHLASNHVSNAVGLTPLRSSSDNFLRLSFDILPTHKEESEDDRSPQTSSEDVRGRRSSAF 60
           +H+ S    N+ GLT L  S    LRLS   L THKEESEDDRSPQ  S+D   + S+ +
Sbjct: 137 RHIGS--FGNSRGLTSLDDSGGRSLRLSQGTLSTHKEESEDDRSPQKPSDDWEDQSSAFW 194

Query: 59  SGQESSLSGGQTRNIADL 6
           SGQ+++   GQ R+  DL
Sbjct: 195 SGQDAAFLAGQHRSSVDL 212


>ref|XP_006453301.1| hypothetical protein CICLE_v10007330mg [Citrus clementina]
           gi|568840551|ref|XP_006474230.1| PREDICTED: pumilio
           homolog 6, chloroplastic-like isoform X1 [Citrus
           sinensis] gi|568840553|ref|XP_006474231.1| PREDICTED:
           pumilio homolog 6, chloroplastic-like isoform X2 [Citrus
           sinensis] gi|557556527|gb|ESR66541.1| hypothetical
           protein CICLE_v10007330mg [Citrus clementina]
          Length = 983

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 45/73 (61%)
 Frame = -2

Query: 224 NHVSNAVGLTPLRSSSDNFLRLSFDILPTHKEESEDDRSPQTSSEDVRGRRSSAFSGQES 45
           N   N  GLT L +SS+  + +S   L THKEESEDDRSP+  S+++  R++   SG E+
Sbjct: 132 NRFGNRRGLTSLDNSSNCSVHVSQVTLSTHKEESEDDRSPKHFSDEMVDRKNGFCSGNEA 191

Query: 44  SLSGGQTRNIADL 6
               GQ RN+ D+
Sbjct: 192 VKVAGQNRNLVDI 204


>ref|XP_006453300.1| hypothetical protein CICLE_v10007330mg [Citrus clementina]
           gi|557556526|gb|ESR66540.1| hypothetical protein
           CICLE_v10007330mg [Citrus clementina]
          Length = 1016

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 45/73 (61%)
 Frame = -2

Query: 224 NHVSNAVGLTPLRSSSDNFLRLSFDILPTHKEESEDDRSPQTSSEDVRGRRSSAFSGQES 45
           N   N  GLT L +SS+  + +S   L THKEESEDDRSP+  S+++  R++   SG E+
Sbjct: 132 NRFGNRRGLTSLDNSSNCSVHVSQVTLSTHKEESEDDRSPKHFSDEMVDRKNGFCSGNEA 191

Query: 44  SLSGGQTRNIADL 6
               GQ RN+ D+
Sbjct: 192 VKVAGQNRNLVDI 204


>ref|XP_002329673.1| predicted protein [Populus trichocarpa]
           gi|566176825|ref|XP_006381773.1| pumilio
           domain-containing protein PPD1 [Populus trichocarpa]
           gi|550336528|gb|ERP59570.1| pumilio domain-containing
           protein PPD1 [Populus trichocarpa]
          Length = 776

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -2

Query: 203 GLTPLRSSSDNFLRLSFDILPTHKEESEDDRSPQTSSEDVRGRRSSAFSGQESSLSGGQT 24
           GLTP+  SS++FL LS  +L THKEE EDD SP+   E +    +  +SG+ ++   GQ+
Sbjct: 131 GLTPIDDSSNSFLHLSQGVLSTHKEELEDDHSPKQPVESLVNTTNGFWSGEAAASLAGQS 190

Query: 23  RNIADL 6
           +++ DL
Sbjct: 191 KSLVDL 196


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