BLASTX nr result

ID: Achyranthes23_contig00038137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00038137
         (602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tam...    77   3e-12
ref|XP_002302625.1| DEAD box RNA helicase family protein [Populu...    77   3e-12
ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arab...    74   2e-11
gb|EMJ20116.1| hypothetical protein PRUPE_ppa001456mg [Prunus pe...    74   3e-11
ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabido...    74   3e-11
dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]       74   3e-11
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    74   4e-11
emb|CBI40505.3| unnamed protein product [Vitis vinifera]               74   4e-11
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]    74   4e-11
gb|EOX95733.1| P-loop containing nucleoside triphosphate hydrola...    73   7e-11
ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Popu...    71   2e-10
ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Caps...    70   3e-10
ref|XP_006444867.1| hypothetical protein CICLE_v10018995mg [Citr...    69   8e-10
ref|XP_006491256.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   1e-09
ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ...    67   3e-09
ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutr...    67   5e-09
ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   3e-08
ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08
ref|XP_004308314.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    64   4e-08

>gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tamarix hispida]
          Length = 783

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPA-FSRIFPFKLKYLGLTSKLGFQTTHSF---STRPYKSR 301
           +TR   MSLNP R P  S  P   SR FPFKL YLG       Q  +S    S+RP++++
Sbjct: 17  LTRLPQMSLNPTRYP--SRLPFNLSRAFPFKLSYLGFGYSRSSQFNNSSRASSSRPFRTK 74

Query: 300 PNSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
           P+ G    RD   +A    SKSLIEDE+++SDW+S LR SS R+G  TED
Sbjct: 75  PDLGT---RDGEMRA----SKSLIEDEEEISDWISKLRTSSNRAGALTED 117


>ref|XP_002302625.1| DEAD box RNA helicase family protein [Populus trichocarpa]
           gi|222844351|gb|EEE81898.1| DEAD box RNA helicase family
           protein [Populus trichocarpa]
          Length = 758

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 51/106 (48%), Positives = 61/106 (57%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSG 289
           VTRF  M++      P    P FSR+FPFKLKYLG  S+    +T SF   P +SRP   
Sbjct: 18  VTRFPLMNVGLSLNTPRP-IPIFSRVFPFKLKYLGFASQF---STRSFRPEPIRSRPEFS 73

Query: 288 PKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
                 V    + P SKSLIEDE +LSDWVS LR +SIR  V +ED
Sbjct: 74  RLTGGGVERGESRP-SKSLIEDEAELSDWVSDLRTNSIRGQVTSED 118


>ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arabidopsis lyrata subsp.
           lyrata] gi|297317188|gb|EFH47610.1| hypothetical protein
           ARALYDRAFT_487703 [Arabidopsis lyrata subsp. lyrata]
          Length = 794

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/88 (51%), Positives = 55/88 (62%)
 Frame = -3

Query: 414 STPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSGPKYPRDVGPKATPPLSKS 235
           S P  S+ FPF+LKY+GL S++      +FSTRP +S+P  G    R  G       SKS
Sbjct: 35  SVPVLSKAFPFRLKYIGLGSRV------NFSTRPERSQPEFG----RRSGAGGDIRASKS 84

Query: 234 LIEDEDDLSDWVSGLRASSIRSGVFTED 151
           LIEDE +LSDWVS LR SS+R G FT D
Sbjct: 85  LIEDEAELSDWVSDLRTSSLR-GKFTSD 111


>gb|EMJ20116.1| hypothetical protein PRUPE_ppa001456mg [Prunus persica]
          Length = 824

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = -3

Query: 465 TRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKS-RPNSG 289
           T F PM   P     S + P  SR+FP +L+Y+GL  +   QT  +FSTR ++  R  SG
Sbjct: 19  THFPPMKFAPTLSS-SRAVPILSRVFPLRLRYMGLGFRRSLQTERAFSTRAFRGPRTGSG 77

Query: 288 PKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIR 172
            + PR    +A    SKSLIEDE +LSDWVS LR+ S R
Sbjct: 78  SELPRGYERRA-GGASKSLIEDEAELSDWVSELRSDSPR 115


>ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana]
           gi|109893654|sp|Q9FNM7.2|RH26_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 26
           gi|332003946|gb|AED91329.1| DEAD-box ATP-dependent RNA
           helicase 26 [Arabidopsis thaliana]
          Length = 850

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 44/88 (50%), Positives = 56/88 (63%)
 Frame = -3

Query: 414 STPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSGPKYPRDVGPKATPPLSKS 235
           S P  S+ FPF+LKY+GL S++      +FSTRP +S+P    ++ R  G       SKS
Sbjct: 35  SVPVLSKAFPFRLKYIGLGSRV------NFSTRPERSQP----EFARRSGAGGEIRASKS 84

Query: 234 LIEDEDDLSDWVSGLRASSIRSGVFTED 151
           LIEDE +LSDWVS LR SS+R G FT D
Sbjct: 85  LIEDEAELSDWVSDLRTSSLR-GKFTSD 111


>dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]
          Length = 827

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 44/88 (50%), Positives = 56/88 (63%)
 Frame = -3

Query: 414 STPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSGPKYPRDVGPKATPPLSKS 235
           S P  S+ FPF+LKY+GL S++      +FSTRP +S+P    ++ R  G       SKS
Sbjct: 12  SVPVLSKAFPFRLKYIGLGSRV------NFSTRPERSQP----EFARRSGAGGEIRASKS 61

Query: 234 LIEDEDDLSDWVSGLRASSIRSGVFTED 151
           LIEDE +LSDWVS LR SS+R G FT D
Sbjct: 62  LIEDEAELSDWVSDLRTSSLR-GKFTSD 88


>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
           vinifera]
          Length = 751

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 46/106 (43%), Positives = 61/106 (57%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSG 289
           V+RF  M+L P  Q  S + P F R+FPFKLKYLGL        +H F  R   +R +S 
Sbjct: 18  VSRFQSMNLKPANQY-SRTLPIFGRVFPFKLKYLGLAPP----PSHHFGPRRLSTR-SSR 71

Query: 288 PKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
           P+     G +    +SKSL+EDE +LSDWVSGL+  S R+    +D
Sbjct: 72  PRPSSTSGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFNDDD 117


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 46/106 (43%), Positives = 61/106 (57%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSG 289
           V+RF  M+L P  Q  S + P F R+FPFKLKYLGL        +H F  R   +R +S 
Sbjct: 18  VSRFQSMNLKPANQY-SRTLPIFGRVFPFKLKYLGLAPP----PSHHFGPRRLSTR-SSR 71

Query: 288 PKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
           P+     G +    +SKSL+EDE +LSDWVSGL+  S R+    +D
Sbjct: 72  PRPSSTSGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFNDDD 117


>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 46/106 (43%), Positives = 61/106 (57%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSG 289
           V+RF  M+L P  Q  S + P F R+FPFKLKYLGL        +H F  R   +R +S 
Sbjct: 18  VSRFQSMNLKPANQY-SRTLPIFGRVFPFKLKYLGLAPP----PSHHFGPRRLSTR-SSR 71

Query: 288 PKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
           P+     G +    +SKSL+EDE +LSDWVSGL+  S R+    +D
Sbjct: 72  PRPSSTSGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFNDDD 117


>gb|EOX95733.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein [Theobroma cacao]
          Length = 793

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
 Frame = -3

Query: 453 PMSLNPLRQPPSS-----STPAFSRIFPFKLKYLGLTSKL-GFQTTHSFSTRPYKSRPNS 292
           P++  P  +P +S     S P  +R+FPFKLK++GL+    G     S STR +++RP S
Sbjct: 17  PVTRFPSMRPGASIGSNGSMPVLNRVFPFKLKFIGLSPGFNGHLGVRSLSTRSFRTRPGS 76

Query: 291 GPKYPR----DVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
             ++ R    DVG       SKSLIEDE +LSDWV  LR  S R  + +ED
Sbjct: 77  SSEFTRKDRGDVGA------SKSLIEDEAELSDWVGELRTDSFRGRLTSED 121


>ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Populus trichocarpa]
           gi|550323824|gb|EEE99174.2| hypothetical protein
           POPTR_0014s09330g [Populus trichocarpa]
          Length = 760

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYK-SRPNS 292
           VTRF  M++  L      S P FSR+FPFKLKY G +S+        FSTR ++     S
Sbjct: 18  VTRFPLMNVG-LSINTRRSIPIFSRVFPFKLKYPGFSSR--------FSTRSFRPGTTGS 68

Query: 291 GPKYPRDVGP---KATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
            P++ R  G    +     SKSL+EDE +LSDWVS LR +S R  V +ED
Sbjct: 69  RPEFTRRTGAERERGEARTSKSLVEDEAELSDWVSDLRTNSFRGRVTSED 118


>ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Capsella rubella]
           gi|482555156|gb|EOA19348.1| hypothetical protein
           CARUB_v10000281mg [Capsella rubella]
          Length = 766

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 45/88 (51%), Positives = 53/88 (60%)
 Frame = -3

Query: 414 STPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSGPKYPRDVGPKATPPLSKS 235
           S P  S+ FPF+LKY+GL S++      SFSTRP +S+   G    R  G       SKS
Sbjct: 35  SVPVLSKAFPFRLKYIGLGSRV------SFSTRPERSQAEFG----RRRGAGGEIRASKS 84

Query: 234 LIEDEDDLSDWVSGLRASSIRSGVFTED 151
           LIEDE +LSDWVS LR SS R G FT D
Sbjct: 85  LIEDEAELSDWVSDLRTSSSR-GKFTSD 111


>ref|XP_006444867.1| hypothetical protein CICLE_v10018995mg [Citrus clementina]
           gi|557547129|gb|ESR58107.1| hypothetical protein
           CICLE_v10018995mg [Citrus clementina]
          Length = 746

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
 Frame = -3

Query: 465 TRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQT-------THSFSTRPYK 307
           TRF  M+L P     S + PAF RIFPFKLKYLGL +++  Q            STRP+ 
Sbjct: 19  TRFPSMNLKPSVNS-SRAIPAFRRIFPFKLKYLGLPTRVNSQQQQQQQLGLRKLSTRPF- 76

Query: 306 SRPNSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRS 169
            RP +  ++ R          SK+LI+DE +LSDWVS LR  S  S
Sbjct: 77  -RPAASSEFGRRGSRAGEIRGSKNLIDDEAELSDWVSDLRTDSFHS 121


>ref|XP_006491256.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Citrus
           sinensis]
          Length = 747

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 46/107 (42%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
 Frame = -3

Query: 465 TRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQT--------THSFSTRPY 310
           TRF  M+L P     S + PAF RIFPFKLKYLGL +++  Q             STRP+
Sbjct: 19  TRFPSMNLKPSVNS-SRAIPAFRRIFPFKLKYLGLPTRVNSQQQQQQQQLGLRKLSTRPF 77

Query: 309 KSRPNSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRS 169
             RP +  ++ R          SK+LI+DE +LSDWVS LR  S  S
Sbjct: 78  --RPAASSEFGRRGSRAGEIRGSKNLIDDEAELSDWVSDLRTDSFHS 122


>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 751

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
 Frame = -3

Query: 462 RFFPMSLNPLRQPPSSS---------TPAFSRIFPFKLKYLGLTSKLGFQ-TTHSFSTRP 313
           RF   SL     PP  S          P FS+IFPF+LKYLGL+     Q +   FSTR 
Sbjct: 10  RFLTPSLPVTSLPPMKSFSLINWNRPVPIFSQIFPFRLKYLGLSPYFNSQLSVRRFSTRS 69

Query: 312 YKSRPN--SGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSGVFTED 151
           ++ R    S  ++ +          SKSLIEDE +LSDWVS L+ SS+R  + +ED
Sbjct: 70  FRPRTTARSSSEFRQ----------SKSLIEDEAELSDWVSELKTSSLRGKLTSED 115


>ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutrema salsugineum]
           gi|557100457|gb|ESQ40820.1| hypothetical protein
           EUTSA_v10012704mg [Eutrema salsugineum]
          Length = 821

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 42/88 (47%), Positives = 54/88 (61%)
 Frame = -3

Query: 414 STPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKSRPNSGPKYPRDVGPKATPPLSKS 235
           S P  S+ FP +LKYLGL S++      +FSTRP +++   G +       +A    SKS
Sbjct: 62  SVPVLSKAFPLRLKYLGLGSRV------NFSTRPERTQTGFGRRSRNGGEIRA----SKS 111

Query: 234 LIEDEDDLSDWVSGLRASSIRSGVFTED 151
           LIEDE +LSDWVS LR SS+R G FT D
Sbjct: 112 LIEDEAELSDWVSDLRPSSLR-GKFTSD 138


>ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Solanum
           lycopersicum]
          Length = 841

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKL---GFQTTHSFSTRPYKSRP 298
           +T F  M  N   +P   + PAFSR+FP KLKY  +   +     Q    FS+R  + RP
Sbjct: 18  LTHFPTMKCNSTLKP--KTIPAFSRMFPHKLKYRSIAFPILAAQEQELRRFSSRSGRPRP 75

Query: 297 NSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASS 178
            SG          A   +SKSLIEDE +LSDWVSGLR+ S
Sbjct: 76  GSG----------ADVRVSKSLIEDEAELSDWVSGLRSDS 105


>ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X2
           [Solanum tuberosum]
          Length = 869

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGF-------QTTHSFSTRPY 310
           VT F  M  N   +P   + P FSR+FP KLKY      +GF       Q    FS+R  
Sbjct: 18  VTHFPTMKCNSTLKP--KTIPVFSRMFPHKLKY----RSIGFPILAAQEQELRRFSSRSG 71

Query: 309 KSRPNSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASS 178
           + RP SG          A   +SKSLIEDE +LSDWVSGLR+ S
Sbjct: 72  RPRPGSG----------ADVRVSKSLIEDEAELSDWVSGLRSDS 105


>ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X1
           [Solanum tuberosum]
          Length = 894

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGF-------QTTHSFSTRPY 310
           VT F  M  N   +P   + P FSR+FP KLKY      +GF       Q    FS+R  
Sbjct: 18  VTHFPTMKCNSTLKP--KTIPVFSRMFPHKLKY----RSIGFPILAAQEQELRRFSSRSG 71

Query: 309 KSRPNSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASS 178
           + RP SG          A   +SKSLIEDE +LSDWVSGLR+ S
Sbjct: 72  RPRPGSG----------ADVRVSKSLIEDEAELSDWVSGLRSDS 105


>ref|XP_004308314.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Fragaria
           vesca subsp. vesca]
          Length = 824

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = -3

Query: 468 VTRFFPMSLNPLRQPPSSSTPAFSRIFPFKLKYLGLTSKLGFQTTHSFSTRPYKS---RP 298
           ++RF  M   P         PAFSR FP +L+YL L S        S STR +++     
Sbjct: 22  ISRFLSMKFGPSISASPRPVPAFSRAFPLRLRYLALGSH------RSLSTRAFRTGSGSS 75

Query: 297 NSGPKYPRDVGPKATPPLSKSLIEDEDDLSDWVSGLRASSIRSG 166
            SG ++ R    KA    SKSL++DE +LSDWVS LR    R G
Sbjct: 76  GSGSQFARGYERKAVGG-SKSLVDDEAELSDWVSELRTDPTRRG 118


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